Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0091 ATGGAGTCTCCTGATACTGCTGCCGAGAAAGATCCAACCGGTCGATACGTTCGGTACGATGAAATCTTGGGAAGGGGCGCTTTCAAGACAGTCTACAAGGCGTTTGACGAAGTTGATGGAATTGAAGTTGCCTGGAACCAAGTTAGGATTGATTGTTTCTTGCAGTCACCTGAGGATTTGGAAAAGCTGTACTCCGAAGTACATCTACTCAAATCATTAAAACATGAGAATATTATAAAGTTCTACAATTCTTGGGTGGATGATAAGAAGAAAACAGTCAACATGATCACTGAGCTCTTCACTTCTGGGAGTTTGAGGCAATACCGTAAAAAACATAAACATGTTGATATGAAGGCCATAAAGAATTGGGCACGGCAGATTCTTCGAGGTTTGGTCTATCTTCACAGTCACAGTCCTCCCATTATTCATAGAGATTTGAAAGGTGATAATATTTTTATTAATGGCAATCATGGAGAAGTTAAAATTGGAGATCTTGGATTAGCAATTGTTTTGCAGCAGCCTACCGCTCAAAGTGTAATTGGAACTCCTGAGTTCATGGCTCCTGAGCTTTATGAAGAGGAGTACAATGAGCTTGTTGATGTATATTCTTTTGGGATGTGCATGCTGGAGATGGTCACCTTTGAGTATCCTTATAGTGAATGTAAAAATCCAGCTCAAATCTATAAGAAAGTTACATCTGGTATTAAACCTGCTTCCCTTGCTAAGGTGAGTGATTCACAGACCATGGAGTTCATCAATAAATGTTTGGTTCCAGCGCACGAGAGGTTGTCTGCAAAAGAGCTTCTTAAAGATTCTTTCCTTCAAGTTGAGAACCCAAAGGAATCAAAGCGTGAGCCCCTACGGTTACCTAACCATGTTCCCAAATCAATAAATTTGCCAAAGAGTGGGCCAATTTCCATGGATATTGACATTGACCATAAACAACATTCTGTAAGCACTTGTGCTGGAAGCAATAGTGGGAGTCCACACGTTCCAGTCATGGAATTCCAGACTATGAATAAGAACAATGAGTTTAGGTTACGTGGAAATAAGAATGATGACAACTCGGTAGCGTTAACCTTGCGTATTGCAGACTCGAATGGTCGAGTTAAGAATATACATTTTACGTTTTATCTCGATTCTGATACTGCACTATCAGTGGCAGCCGAAATGGCTGAGCAATTGGAGTTGATAAATCATTATGTGGATTTCATAGCTGAATTTATTGATTTTTTGATATCAAAACTTATACCTGGTTGGAAGCCCTTGTCTGATTATTCATCAAATGGAGCGCTGTATCTTTGTGGCGGCCCCACTGTTTTTAAAAGTACCAAATCATCCCTCGCATCTCCATGGGATTCAATGTTAAATGGGGTTAATGACGGGTTGGTCGAACTGGAACAAGACATTTCCACTGGGTTAGTGAGTTGTACTCAAAACGATAGTCTGCAATCTGATGGAGTTGGCTGGGGTGATGGTATTCCCAGTAGTCATCTTTTTGATACTTGTCCTTCTTCTCCCAGTTTAGCTAATTTTGAGGACCTGAATTCACATGCTTCATTTGCATCAGAGTTATTATTGGTGGAAGATTGTTGTACAAAAAGTGCTAAGGTGATAGATTGTTCCAATATTGATGGAAGCTCGAAAGGCTCGAGCTGGTCGATTGCAGAACTAGAGCTCCACGGTTCATCATTTGTGGAAGACAAATTGCAAAGAAATGTTAGTGATGTTGGAATCTTCACTCCCATGGATTATTTTGTGAAGAACTCAGTCTTGTCATTGCCTGCTCCAAGTGAAGCATCTAATGTGATGAGCTTGACAAGCAGTTGTTCTTCGCTATCCTTAGCGGACAAGGATCCCGATGCCGAACTCAAGTTAGAAATCAATGCTATCGAGATGCATTATCAGCAGTTGTTCGAAGAGCTTTCTCGAATGAGAGAGGAAGCACTAGAGGCTGCCAGAAAGAGATGGGTTGCAAAGAAGAAACTGATTCATTGA 1998 40.84 MESPDTAAEKDPTGRYVRYDEILGRGAFKTVYKAFDEVDGIEVAWNQVRIDCFLQSPEDLEKLYSEVHLLKSLKHENIIKFYNSWVDDKKKTVNMITELFTSGSLRQYRKKHKHVDMKAIKNWARQILRGLVYLHSHSPPIIHRDLKGDNIFINGNHGEVKIGDLGLAIVLQQPTAQSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYSECKNPAQIYKKVTSGIKPASLAKVSDSQTMEFINKCLVPAHERLSAKELLKDSFLQVENPKESKREPLRLPNHVPKSINLPKSGPISMDIDIDHKQHSVSTCAGSNSGSPHVPVMEFQTMNKNNEFRLRGNKNDDNSVALTLRIADSNGRVKNIHFTFYLDSDTALSVAAEMAEQLELINHYVDFIAEFIDFLISKLIPGWKPLSDYSSNGALYLCGGPTVFKSTKSSLASPWDSMLNGVNDGLVELEQDISTGLVSCTQNDSLQSDGVGWGDGIPSSHLFDTCPSSPSLANFEDLNSHASFASELLLVEDCCTKSAKVIDCSNIDGSSKGSSWSIAELELHGSSFVEDKLQRNVSDVGIFTPMDYFVKNSVLSLPAPSEASNVMSLTSSCSSLSLADKDPDAELKLEINAIEMHYQQLFEELSRMREEALEAARKRWVAKKKLIH 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1193348 1197253 - Tan0004339.1 Tan10g0091 764885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0091 665 Gene3D Transferase(Phosphotransferase) domain 1 100 280 - -
Tan10g0091 665 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Tan10g0091 665 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0091 665 FunFam probable serine/threonine-protein kinase WNK9 100 279 - -
Tan10g0091 665 Coils Coil 628 655 - -
Tan10g0091 665 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 650 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Tan10g0091 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g0091 665 SUPERFAMILY Protein kinase-like (PK-like) 19 275 IPR011009 -
Tan10g0091 665 FunFam Probable serine/threonine-protein kinase WNK1 2 98 - -
Tan10g0091 665 CDD STKc_WNK 15 274 - -
Tan10g0091 665 SMART serkin_6 17 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0091 665 ProSiteProfiles Protein kinase domain profile. 17 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1504 Tan-Chr7:66306093 Tan10g0091 Tan-Chr10:1193348 1.70E-172 dispersed
Tan09g0381 Tan-Chr9:35389756 Tan10g0091 Tan-Chr10:1193348 2.60E-125 dispersed
Tan10g0091 Tan-Chr10:1193348 Tan03g0278 Tan-Chr3:42084105 1.30E-21 dispersed
Tan10g0091 Tan-Chr10:1193348 Tan10g0092 Tan-Chr10:1193348 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68106 PF00069 Pkinase 1.10E-53 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0091 K08867 - csv:101204101 1122.46