Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0092 ATGAAGGCCATAAAGAATTGGGCACGGCAGATTCTTCGAGGTTTGGTCTATCTTCACAGTCACAGTCCTCCCATTATTCATAGAGATTTGAAAGGTGATAATATTTTTATTAATGGCAATCATGGAGAAGTTAAAATTGGAGATCTTGGATTAGCAATTGTTTTGCAGCAGCCTACCGCTCAAAGTGTAATTGGAACTCCTGAGTTCATGGCTCCTGAGCTTTATGAAGAGGAGTACAATGAGCTTGTTGATGTATATTCTTTTGGGATGTGCATGCTGGAGATGGTCACCTTTGAGTATCCTTATAGTGAATGTAAAAATCCAGCTCAAATCTATAAGAAAGTTACATCTGGTATTAAACCTGCTTCCCTTGCTAAGGTGAGTGATTCACAGACCATGGAGTTCATCAATAAATGTTTGGTTCCAGCGCACGAGAGGTTGTCTGCAAAAGAGCTTCTTAAAGATTCTTTCCTTCAAGTTGAGAACCCAAAGGAATCAAAGCGTGAGCCCCTACGGTTACCTAACCATGTTCCCAAATCAATAAATTTGCCAAAGAGTGGGCCAATTTCCATGGATATTGACATTGACCATAAACAACATTCTGTAAGCACTTGTGCTGGAAGCAATAGTGGGAGTCCACACGTTCCAGTCATGGAATTCCAGACTATGAATAAGAACAATGAGTTTAGGTTACGTGGAAATAAGAATGATGACAACTCGGTAGCGTTAACCTTGCGTATTGCAGACTCGAATGGTCGAGTTAAGAATATACATTTTACGTTTTATCTCGATTCTGATACTGCACTATCAGTGGCAGCCGAAATGGCTGAGCAATTGGAGTTGATAAATCATTATGTGGATTTCATAGCTGAATTTATTGATTTTTTGATATCAAAACTTATACCTGGTTGGAAGCCCTTGTCTGATTATTCATCAAATGGAGCGCTGTATCTTTGTGGCGGCCCCACTGTTTTTAAAAGTACCAAATCATCCCTCGCATCTCCATGGGATTCAATGTTAAATGGGGTTAATGACGGGTTGGTCGAACTGGAACAAGACATTTCCACTGGGTTAGTGAGTTGTACTCAAAACGATAGTCTGCAATCTGATGGAGTTGGCTGGGGTGATGGTATTCCCAGTAGTCATCTTTTTGATACTTGTCCTTCTTCTCCCAGTTTAGCTAATTTTGAGGACCTGAATTCACATGCTTCATTTGCATCAGAGTTATTATTGGTGGAAGATTGTTGTACAAAAAGTGCTAAGGTGATAGATTGTTCCAATATTGATGGAAGCTCGAAAGGCTCGAGCTGGTCGATTGCAGAACTAGAGCTCCACGGTTCATCATTTGTGGAAGACAAATTGCAAAGAAATGTTAGTGATGTTGGAATCTTCACTCCCATGGATTATTTTGTGAAGAACTCAGTCTTGTCATTGCCTGCTCCAAGTGAAGCATCTAATGTGATGAGCTTGACAAGCAGTTGTTCTTCGCTATCCTTAGCGGACAAGGATCCCGATGCCGAACTCAAGTTAGAAATCAATGCTATCGAGATGCATTATCAGCAGTTGTTCGAAGAGCTTTCTCGAATGAGAGAGGAAGCACTAGAGGCTGCCAGAAAGAGATGGGTTGCAAAGAAGAAACTGATTCATTGA 1650 40.79 MKAIKNWARQILRGLVYLHSHSPPIIHRDLKGDNIFINGNHGEVKIGDLGLAIVLQQPTAQSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYSECKNPAQIYKKVTSGIKPASLAKVSDSQTMEFINKCLVPAHERLSAKELLKDSFLQVENPKESKREPLRLPNHVPKSINLPKSGPISMDIDIDHKQHSVSTCAGSNSGSPHVPVMEFQTMNKNNEFRLRGNKNDDNSVALTLRIADSNGRVKNIHFTFYLDSDTALSVAAEMAEQLELINHYVDFIAEFIDFLISKLIPGWKPLSDYSSNGALYLCGGPTVFKSTKSSLASPWDSMLNGVNDGLVELEQDISTGLVSCTQNDSLQSDGVGWGDGIPSSHLFDTCPSSPSLANFEDLNSHASFASELLLVEDCCTKSAKVIDCSNIDGSSKGSSWSIAELELHGSSFVEDKLQRNVSDVGIFTPMDYFVKNSVLSLPAPSEASNVMSLTSSCSSLSLADKDPDAELKLEINAIEMHYQQLFEELSRMREEALEAARKRWVAKKKLIH 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1193348 1197253 - Tan0004339.2 Tan10g0092 764886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0092 549 Coils Coil 512 539 - -
Tan10g0092 549 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0092 549 SMART serkin_6 1 158 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0092 549 Pfam Protein kinase domain 2 158 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0092 549 FunFam probable serine/threonine-protein kinase WNK9 1 163 - -
Tan10g0092 549 SUPERFAMILY Protein kinase-like (PK-like) 3 159 IPR011009 -
Tan10g0092 549 Gene3D Transferase(Phosphotransferase) domain 1 1 164 - -
Tan10g0092 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g0092 549 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 534 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g0092 Tan-Chr10:1193348 Tan01g4633 Tan-Chr1:112249560 4.40E-15 dispersed
Tan10g0091 Tan-Chr10:1193348 Tan10g0092 Tan-Chr10:1193348 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68107 PF00069 Pkinase 5.00E-34 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0092 K08867 - csv:101204101 892.493