Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g0111 | ATGAAGATTGAAGATGGGTTGAGGAGTGTGGGTGGGAAGGATGAAGATAAGACTGTGGTTGCTGCTGTTTTGGGCACTCGGGCTTTTAATTACTTGATGTCTTGCTCTGTTTCGAATGAGAATCTGTTTATGGCTGTGAGGAATGACGAGAATTTGCAGAACAAGCTCTCGGATCTGGTGGAGAGGCCCAACGCTTCTAATTTTCGCTGGAACTATGCAATTTTCTGGCAACTTTCTCATTCAAAATCTGGTGAATGGGTTTTGGGATGGGGAGATGGATCGTGTAGAGATCCTAGGGATGGAGGAGAGGGAACAGAAGCTACACAGATTTTTAGTCTTGGCCTTGAAGATGAGAGCCAACAAAGGATGAAGAAAAGAGCACTGCAGAAGCTTCACACACTGTTTGGTGGTTCTGATGAGGATAATTATGCTCTTGGATTGGACAGAGTTACTGATACTGAAATGTTTTTTCTTGCTTCCATGTATTTTTCCTTCCCTCGTGGAGAAGGGGGCCCTGGCAAGTGTTTGGCTTCTGGGAAACATATCTGGCATTTGGATGTACTCAATTCACCTGCTGAGTATTGTGTGAGATCCTATCTGGCCAAGTCTGCAGGAATTCGGACCGTCGTTTTGGTGCCGACTGATGTTGGAGTAGTTGAATTGGGTTCTGTGAGATCCGTGAGTGAGAGCTTAGAGTTAGTGCAGTTGATTAGGTCGATGTTTTCATCTCAACATTCACTTGATAGAGTGAGGACGTCGGCTGCGATGTCGATGATCGCCGAAAGGAAGGATGAAAACACCCCATTTCCGAGTTTGGGGATTGCAGAAAGAGGAGATGGAGGGGGCGTTCCTAAGGTTTTTGGGCAGAGTTTGAACTCGGGGAACATGGGTCGGTCTCATTTCAGAGAGAAACTGGCGATTAGGAAGATGGATGAGAGGTCATGGGAAGCATGTGCCAATGGAGGTAGAATTCAGTTTCAAAGCCCCCGAAATGGCATTCGCAGTCCGAATTTAGCGCATGTTCATGCTCTCAAACAGGGGAATCCTACAGAAATTTTTGGCTCTCCAACCCCACCAGTAAATAATAATCACGAGCAGCTTGTCAATGGAGGCAGAGATGAATTTTGTCTTAATCCCTATCAATCACAAAAGCTGGTCCAAATGCAAATTGATTTCTCTGTAGCAACAGCAAGGCCACCTTCTGTGATTAACCGTGTTGGCGCAGATTCAGAGCATTCAGATGTAGAGCCTCAATGCAAAGAAGAGGGGCCTGGTGCCGATGAAAGACGGCCACGCAAACGAGGCAGAAAGCCTGCAAATGGCAGGGAGGAACCTCTAAATCACGTGGAGGCGGAGAGACAGCGCCGTGAAAAGTTGAACCAGCGGTTCTATGCTTTACGAGCTGTTGTGCCCAACATCTCCAAGATGGACAAAGCTTCACTGCTAGGAGATGCCATTGCTTACATTAACGAGCTTCAAGCAAAAGTTAAGGCCATGGAATTTGAACGGGAGAAATCTGGCATCACCTCGAGTGAAGCAACCCCTTCGGAGGTGAACCCAGAAATTGAAAACAAAGATCAATTCCTCGATGTTGACATTGATGTTGAAGCGGCTAACGATGAAGTCATCGTTAAGGTTAGCTGCCCATTAGAGTCACACCCTGCATCAAGAGTTATCAAGGCAATGAAAGATGCTCAGATCAATGTCGTTGATTCAACACTCTCTGAAGCAAATGATACAGTTTTGCACACGTTTGTCATCAAGTCTCCCGGACCCGAGCAGTTGACGAAGGAACAGTTGATAGCCGCCTTTTCTCGGGATTCCACTCCGTTACATCCTTTATCAACAGTTGGGTAG | 1857 | 46.42 | MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLVERPNASNFRWNYAIFWQLSHSKSGEWVLGWGDGSCRDPRDGGEGTEATQIFSLGLEDESQQRMKKRALQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCLASGKHIWHLDVLNSPAEYCVRSYLAKSAGIRTVVLVPTDVGVVELGSVRSVSESLELVQLIRSMFSSQHSLDRVRTSAAMSMIAERKDENTPFPSLGIAERGDGGGVPKVFGQSLNSGNMGRSHFREKLAIRKMDERSWEACANGGRIQFQSPRNGIRSPNLAHVHALKQGNPTEIFGSPTPPVNNNHEQLVNGGRDEFCLNPYQSQKLVQMQIDFSVATARPPSVINRVGADSEHSDVEPQCKEEGPGADERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKVKAMEFEREKSGITSSEATPSEVNPEIENKDQFLDVDIDVEAANDEVIVKVSCPLESHPASRVIKAMKDAQINVVDSTLSEANDTVLHTFVIKSPGPEQLTKEQLIAAFSRDSTPLHPLSTVG | 618 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1311704 | 1314990 | + | Tan0002270.1 | Tan10g0111 | 764905 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g0111 | 618 | MobiDBLite | consensus disorder prediction | 404 | 454 | - | - | |
Tan10g0111 | 618 | CDD | bHLH_AtAIB_like | 440 | 513 | - | - | |
Tan10g0111 | 618 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 446 | 505 | IPR036638 | GO:0046983(InterPro) | |
Tan10g0111 | 618 | Pfam | Helix-loop-helix DNA-binding domain | 447 | 493 | IPR011598 | GO:0046983(InterPro) | |
Tan10g0111 | 618 | Gene3D | - | 436 | 506 | IPR036638 | GO:0046983(InterPro) | |
Tan10g0111 | 618 | FunFam | Transcription factor bHLH13 | 436 | 509 | - | - | |
Tan10g0111 | 618 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 443 | 492 | IPR011598 | GO:0046983(InterPro) | |
Tan10g0111 | 618 | PANTHER | MYC | 41 | 606 | IPR045084 | GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER) | |
Tan10g0111 | 618 | SMART | finulus | 449 | 498 | IPR011598 | GO:0046983(InterPro) | |
Tan10g0111 | 618 | MobiDBLite | consensus disorder prediction | 409 | 454 | - | - | |
Tan10g0111 | 618 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 52 | 241 | IPR025610 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g1978 | Tan-Chr7:71506523 | Tan10g0111 | Tan-Chr10:1311704 | 4.50E-56 | dispersed | |
Tan07g2244 | Tan-Chr7:73849917 | Tan10g0111 | Tan-Chr10:1311704 | 2.20E-74 | dispersed | |
Tan07g2245 | Tan-Chr7:73849917 | Tan10g0111 | Tan-Chr10:1311704 | 2.20E-74 | dispersed | |
Tan08g0898 | Tan-Chr8:11974965 | Tan10g0111 | Tan-Chr10:1311704 | 6.50E-11 | dispersed | |
Tan09g1736 | Tan-Chr9:68878886 | Tan10g0111 | Tan-Chr10:1311704 | 2.20E-09 | dispersed | |
Tan10g0111 | Tan-Chr10:1311704 | Tan11g1947 | Tan-Chr11:31004043 | 5.90E-08 | dispersed | |
Tan10g0111 | Tan-Chr10:1311704 | Tan01g2188 | Tan-Chr1:25750967 | 2.60E-64 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28465 | PF14215 | bHLH-MYC_N | 9.70E-53 | CL0161 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g0111 | - | - | - | 0.0 |