Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0130 ATGGCAGATCGTGATGATTTGCACTGTATGGGGTTTGGACAACCAACTTCTGAATTCCATGACAAATATGGAGGTTACCAAAACAGAAACAGACTGTCTCCAAGGTCAATATTGGAATGCATACAGAGAGGATTTGCCAGAGCTTCTAAGAGCTTTAGAAGGATAATAGCACAGCCAGGATTCAAGCATTCAGGTGATCAGTCAGTAAAGAAACCAGAGTTTTGGAAGAAAATTCTTGATCCACAGAAGCCATTTCTTCAGCAATGGAACAAGATATTTGTGTTGTCCTCTGTCATAGCAGTAGCTGTGGACCCTCTCTTCTTTTACATCCCAGTGTTTGATAAAGACCATCAATGCCTGACCATGGATCGACCCCTTATGATCGTTGCTTGTGTTCTTCGTTCATTCATTGACTTATTTTATCTACTTCACATGATCTTTGAATTTCGAACTGGTTTTCTGCCCCCTTCTTTACCAGTATTTGGAAGTGGTGAATTAATCGAAGATCCAACAGCTATAGCAAAGAGATACCTCTCCTCAAACTTCTTGGTTGATATCTTATCCATTCTCCCACTGCCTCAGCTTTTGGTATTAGTAATCATACCTGCAGCGAAAGGCCCGGTTCCATTGAAGACGAAAAAAGTCGTGAAGCTTGCAGTTCTTTTGCAATATATTCCAAGGCTTCTTCGAATTTATCCACTATACAGAGAAGTAACCAGAACTTCTGGCATACTGACAGAAACTGCTTGGAGTGGAGCTGCCTTCAATCTTCTTATTTATATGCAAGCTAGTCATGTAGTTGGTGCCATTTGGTATTTGTTATCAATAGAACGACAAACAATATGCTGGCTCAAGGCATGCAAAGATAATAGCTGTACCGACAGTTTTCTCTACTGTGGAGATCCTAGTAAAGCAAGAGCCTTGTCTATAAAGGAGTATTGCTCTCCTAAGGAGTCTGAAAAGGACAAGAACTTTGACTATGGGATGTATGCTGAAGCCCTTAAGTTTGAGTTAACTGAGACGATGAGTTTTCGCCGCAAATTCTTCTATTCCTTTTGGTGGGCTCTGCGAAATGTTGGCTCTAGTGGACAAAACCTTGAAGTAAGCCATTACATGGGGGAGGTTTTTTTTGCTGTCTTCATTGCCATCCTTGGTTTGGTTTTGTTTGCCTTACTCATTAGCAATATTCAGAAATATCTGCAGTCAACAACTGTTAAAGTAGAGCAGATGAGAATTAACCGAAGAGATGCCGAGCATTGGATGGCACATCGTATGCTCCCGGAGGAATTGAGGCATCGTATTAGACGATACGATCAGTACAAATGGCAGCTAAACAGGGGAGTTAAGGAAGAGGAACTCATCAGCAACCTTCCTAAAGACCTTAGGAGAGACATCAAACGCCATCTTTGCTTGGCCCTTCTTAAGAAAGTGCCACTTTTTAGCAGCATGGATAAGCAACTGTTGGACTCGATGTGTGAATATCTCAAGCCTGTGTTATTCACAGAGAAGAGCTTCATTCTGCAAGAGGGTGACCCAATTGATATGATGCTATTTATCATGAAAGGAAAGCTGGCTACCATTATTACTTACGGTTGGAAAAACGACTCTTACTCGGCCATTCTTAACGCTGGAGACTTTTGTGGTGAAGAGCTAGTTCAATGGGCAATGGATCCAACCTCCACTTCTCTTCCCATTTCAGCCAGAACAGTTAAATCTCTAACTGAGGTTGAAGCCTTTGCTCTAAAGGCTGATGAGCTGAAATTTGTAACTAGTCAGTTCCGCTTCCAGCGCCTCAATAGCAAGCAATTCCAACTCTCAGTGAGGTTCTACTCTCATCAATGGAAAGTTTGGGCAGCCTATAAAATACAAGAAGCTTGGCATGATTACCGTGAAAGAAAGAAGAGAGGGGGTGGAGATGGCAGGTTTCAAGATGCATTGGCTAAAACAGTTAGTGCCTCGGCGAGCTTCGGCGCCACTCTATATGCATCCATATTCATATCACATCTACTGCAAGCTGTGCAGCGAGATCAACACCAGAAAACTGCTCAATTCACACGAGTGATGACGCTACCACCTCCTCCGAAGCCAGACGACGAGCAAGGCAAGCCAAACTTCTCCATCTTGAATCTTTAA 2133 42.62 MADRDDLHCMGFGQPTSEFHDKYGGYQNRNRLSPRSILECIQRGFARASKSFRRIIAQPGFKHSGDQSVKKPEFWKKILDPQKPFLQQWNKIFVLSSVIAVAVDPLFFYIPVFDKDHQCLTMDRPLMIVACVLRSFIDLFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPTAIAKRYLSSNFLVDILSILPLPQLLVLVIIPAAKGPVPLKTKKVVKLAVLLQYIPRLLRIYPLYREVTRTSGILTETAWSGAAFNLLIYMQASHVVGAIWYLLSIERQTICWLKACKDNSCTDSFLYCGDPSKARALSIKEYCSPKESEKDKNFDYGMYAEALKFELTETMSFRRKFFYSFWWALRNVGSSGQNLEVSHYMGEVFFAVFIAILGLVLFALLISNIQKYLQSTTVKVEQMRINRRDAEHWMAHRMLPEELRHRIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKRHLCLALLKKVPLFSSMDKQLLDSMCEYLKPVLFTEKSFILQEGDPIDMMLFIMKGKLATIITYGWKNDSYSAILNAGDFCGEELVQWAMDPTSTSLPISARTVKSLTEVEAFALKADELKFVTSQFRFQRLNSKQFQLSVRFYSHQWKVWAAYKIQEAWHDYRERKKRGGGDGRFQDALAKTVSASASFGATLYASIFISHLLQAVQRDQHQKTAQFTRVMTLPPPPKPDDEQGKPNFSILNL 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1398240 1404758 - Tan0004145.4 Tan10g0130 764924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0130 710 MobiDBLite consensus disorder prediction 688 710 - -
Tan10g0130 710 CDD CAP_ED 479 610 IPR000595 -
Tan10g0130 710 Gene3D Jelly Rolls 477 595 IPR014710 -
Tan10g0130 710 ProSiteProfiles cAMP/cGMP binding motif profile. 479 563 IPR000595 -
Tan10g0130 710 Pfam Ion transport protein 94 405 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan10g0130 710 Gene3D - 91 403 - -
Tan10g0130 710 FunFam Cyclic nucleotide-gated ion channel 1 406 470 - -
Tan10g0130 710 SMART cnmp_10 479 608 IPR000595 -
Tan10g0130 710 SUPERFAMILY Voltage-gated potassium channels 80 401 - -
Tan10g0130 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 67 671 - -
Tan10g0130 710 SUPERFAMILY cAMP-binding domain-like 408 593 IPR018490 -
Tan10g0130 710 Gene3D Helix hairpin bin 405 470 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g0128 Tan-Chr10:1398240 Tan10g0130 Tan-Chr10:1398240 0.00E+00 dispersed
Tan10g0130 Tan-Chr10:1398240 Tan11g0453 Tan-Chr11:3663641 5.60E-95 dispersed
Tan10g0129 Tan-Chr10:1398240 Tan10g0130 Tan-Chr10:1398240 0.00E+00 tandem
Tan10g0130 Tan-Chr10:1398240 Tan10g0131 Tan-Chr10:1414806 1.70E-269 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0130 K05391 - csv:101206492 1087.4