Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0131 ATGCTCATTAGGCCACTACTCACAACTTCTTTCCTCACTCACACTCCAGCCCTTCAAAGAAAGTGTTTTTTTTTTTTTTTGAGCTTAAAGCAACAGTTTAGCCTCAGATTTTGTGTACTGATGTTCAAGTTTATGGGTTCCCGGAAACCAAAACAACCTGTAAGGTTTCCATATCCACCTGATTTCTTTTTCAATCCTGGAGCCATTGAAAGGAAAAGCAGACTGTCGTCAATATTGGAGAGCATTTCTATTGTTTGGAAGAAAACTCTTGATCCACAGAAGCCATTTCTCCTGCAATGGAACAAGATATTTGTGCTGTCCTCTGTCATGGCAGTAGCTGTGGACCCTCTTTTCTTTTACATCCCAGTGTTTGACAGACAACATCAATGCCTAACCATGGACCGACCCCTTATGATCGTCGCTTGCGTTCTCCGTTCGTTCATTGACATATTTTATCTACTCCACGTGATCTTTGAATTTCGAACGTGTTTTCGTCCCTCTTCTTTACCAATATTAGGAAGTGCTGACTTAATTGAAGATCTAACAGCTATAGCAAAGAGATACCTCTTTTCAAACTTCACGATTGATATCTTATCCATTCTCCCACTGCCTCAGCTTTTGGTATTAGTAATCGTACCTGCATTGAAAGGCCCGATTCCATTGAAGACAAAGGACTTTGTAAAGATTGCAGTTCTTTTGCAGTACATTCCGAGGCTTCTCCGAATTTATCCACTATACAGAGAAGTAACCAGAACTTCTGGCATACTAACAGAAAGAGCCTGGAGTGGAGCTGCCTTCAATCTCCTTATTTATATGCAATCTAGTCATGTAGTTGGTGCCCTTTGGTATTTGTTTTCCGTAGAACAACAAGCAAGATGCTGGCTCGAGGCATGTAAAAAAAGTAACTGTACCAGCAATTTTCTGTACTGTGGTGATCACAACAGACAAGCATACCCGTTTATAGATACGTATTGCCCTCATAAAGAATCTGGAGATGACAATGCCTTCAACTTTGGGATGTATGTTGAAGCCCTTAAGTTTCATTTAACCGAGACGACGAACTTTCGCCGAAAATTCATTTATTCCTTCTGGTGGGCTCTTCGAAATGTCGGCTCTAGTGGACAAAACCTTGAAGTAAGCGATTACATGGGGGAGGTTCTTTTTGCTGTGTTTATTGCCATCCTCGGTTTGGTTTTATTTGCGTTACTCGTTAGCAACATTCAGAAATATCTGCAGTCAAGTACTGTTAGAGTAGAGCAGATGAGAATTAACCGAAGAGATGCTGAGAATTGGATGGCACAACGTATGCTCCCGAAGAAGTTGAGGCAGCGTATCAGACGATATGATCAGTACAAATGGCAGCTAAACAGGGGAGTTAAGGAAGAGGAATTGATCAATAACTTTTCAATAGACCTCAGAAGAGACATCAAACGCCATCTTCACTTTGATGCTTGCTTGGCTATTCTTAAGAGAGTGCCATTTTTCAGAAGCATGGATAATCGACTGTTGGACGTAATGTACGAATATCTCAAGCCAGTGTTATTCACAGAGCACAGTACCATTTTGTATGACGGGGACCCAATTGTTATGATGCTATTTATTGTGAAAGGAAAGCTAGTTGCTACTGGTAATTGGGAAAACAAATCTTACAGGGTCGTTCTTAAGGCTGGCGATTTTTACGGTGAAGAGTTAGTTCCATGGGCAATGGAAAACCACCCCACTCCTCTTCCAATTTCCACCAGAACAATTAAATCTCTAACTAAGGTTGAAGCCTTTGCTCTAGAGGCTAAGCAGTTGCAATCTGTAGCTAGTCAGTTCTACGTCCAGTACCTCGATAGCAAGCGATCAATGAGGTTCTACTCTCCTGAATGGAGAGTCTGGGCAGCCTATAAAGTACAAGAAGCTTGGCATGAATACTGTGAAAGAAAACAGAAGATGGGGGGTGGAGCTGGTAGGTTTCAAGATGCATTGGCTAAAACAGTTGGCACCGCAGCAAGCTTTAGTGTCAATCTATATGCGTCTGTATTCATATCCCATCTACTGCAAGCCGTGCAGCGAGATCGACACCAGGAAACTACCCAACTCTCACGAGTGATGACGCTACCACCACCTCCGAAGCCAAACGAGCGAGACGAGCAAGACCACACCATCTCGGATCTTTAA 2163 42.39 MLIRPLLTTSFLTHTPALQRKCFFFFLSLKQQFSLRFCVLMFKFMGSRKPKQPVRFPYPPDFFFNPGAIERKSRLSSILESISIVWKKTLDPQKPFLLQWNKIFVLSSVMAVAVDPLFFYIPVFDRQHQCLTMDRPLMIVACVLRSFIDIFYLLHVIFEFRTCFRPSSLPILGSADLIEDLTAIAKRYLFSNFTIDILSILPLPQLLVLVIVPALKGPIPLKTKDFVKIAVLLQYIPRLLRIYPLYREVTRTSGILTERAWSGAAFNLLIYMQSSHVVGALWYLFSVEQQARCWLEACKKSNCTSNFLYCGDHNRQAYPFIDTYCPHKESGDDNAFNFGMYVEALKFHLTETTNFRRKFIYSFWWALRNVGSSGQNLEVSDYMGEVLFAVFIAILGLVLFALLVSNIQKYLQSSTVRVEQMRINRRDAENWMAQRMLPKKLRQRIRRYDQYKWQLNRGVKEEELINNFSIDLRRDIKRHLHFDACLAILKRVPFFRSMDNRLLDVMYEYLKPVLFTEHSTILYDGDPIVMMLFIVKGKLVATGNWENKSYRVVLKAGDFYGEELVPWAMENHPTPLPISTRTIKSLTKVEAFALEAKQLQSVASQFYVQYLDSKRSMRFYSPEWRVWAAYKVQEAWHEYCERKQKMGGGAGRFQDALAKTVGTAASFSVNLYASVFISHLLQAVQRDRHQETTQLSRVMTLPPPPKPNERDEQDHTISDL 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1414806 1419856 - Tan0016138.1 Tan10g0131 764925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0131 720 Gene3D Helix hairpin bin 415 480 - -
Tan10g0131 720 MobiDBLite consensus disorder prediction 698 720 - -
Tan10g0131 720 Pfam Ion transport protein 123 416 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan10g0131 720 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 79 685 - -
Tan10g0131 720 Gene3D Jelly Rolls 492 607 IPR014710 -
Tan10g0131 720 Gene3D - 103 414 - -
Tan10g0131 720 ProSiteProfiles cAMP/cGMP binding motif profile. 494 602 IPR000595 -
Tan10g0131 720 CDD CAP_ED 494 605 IPR000595 -
Tan10g0131 720 SUPERFAMILY cAMP-binding domain-like 419 606 IPR018490 -
Tan10g0131 720 SUPERFAMILY Voltage-gated potassium channels 91 412 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g0129 Tan-Chr10:1398240 Tan10g0131 Tan-Chr10:1414806 1.90E-242 dispersed
Tan10g0131 Tan-Chr10:1414806 Tan11g0453 Tan-Chr11:3663641 3.80E-83 dispersed
Tan10g0130 Tan-Chr10:1398240 Tan10g0131 Tan-Chr10:1414806 1.70E-269 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0131 K05391 - csv:101206492 875.544