Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0157 ATGGGGACTAGTGAAGAGCCAAAGGCTGTGAAACCTGAAAAACCATCTTCTCCAACGCAGGATCAGAACAACGGGTCGAATTCAGCCAGTATTCATGTTTTTCCTGATTGGGCAGCCATGCAGGCATATTATGGTCCTAGAGTTGCAGTTCCACCATACTACAACTCTGCTGTGGCTTCAGGCCATGCTCCTCACCCATATATGTGGGGCCCACCACAGATGATTCCTCCATATGGCACTCCTTATGCAGCAATCTATTCCCATGGAGGCGTTTATGCACATCCTGCAGTTTCCATGGGGCCCCATTCACATGGCCCAGGTCTTCCCTCATCACCTGCTCCTGCTGTAACTCCTTTGAGCATTGAAACACCTTCAAAGGGGTCTGGAAATAGCAGTCAAGGTTTAATGAAGAAACTGAAAGGTTTTGATGGCCTGGCAATGTCTATTGGCAATGTTAGTACTGAGAGTGCTGATGGGGGAGTTGAGCACGGACCATCAGAGAGTATGGAAACTGAAGGTTCCAGTGATGGAAGTGATGGAACTACTGCTGGGGAAAATCAAACCAAAAGGAAAAGAAGCCGTGAGGGAACACCTACCACTGGTAAGGATGCAAAAATTGAGACTCAGGGAAGTCCGGTTACTGCTGCTGAAATGAATGAAAGCTCTAGCAAGTTATTGGGCACAACCAAAGCAGCTGATGCAACTGGAAAGCTTGGATCTATGATTTCTCCTGGAATGTCTACAGCATTGGAACTTAGGAATCCTTCTAGTATAAACACCATTTCAGGTCAAACTAGCGTTCCGCCCTGTTCAGTATTGCCTTCTGAAGTCTGGCTACAGAATGAAAAAGAACTAAAACGGGAAAGGAGAAAACAGTCTAATAGAGAATCCGCTAGGAGGTCAAGGCTGAGGAAGCAGGCTGAAACTGAAGAACTAGCTCGTAAAGTCGATTCACTGACAGCGGAGAATGTCGCTCTTAGATCTGAAATAAGTAGATTGTCAGAGAATTCCGAGAAATTTAAGCAAGAAAACGCTACATTGATGGTGTGTTGCTGCCCTCTTTGA 1065 46.01 MGTSEEPKAVKPEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVASGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGLPSSPAPAVTPLSIETPSKGSGNSSQGLMKKLKGFDGLAMSIGNVSTESADGGVEHGPSESMETEGSSDGSDGTTAGENQTKRKRSREGTPTTGKDAKIETQGSPVTAAEMNESSSKLLGTTKAADATGKLGSMISPGMSTALELRNPSSINTISGQTSVPPCSVLPSEVWLQNEKELKRERRKQSNRESARRSRLRKQAETEELARKVDSLTAENVALRSEISRLSENSEKFKQENATLMVCCCPL 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1737312 1743574 + Tan0003522.2 Tan10g0157 764951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0157 354 MobiDBLite consensus disorder prediction 116 135 - -
Tan10g0157 354 FunFam G-box binding factor 3 285 340 - -
Tan10g0157 354 Pfam bZIP transcription factor 282 344 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g0157 354 Coils Coil 302 343 - -
Tan10g0157 354 MobiDBLite consensus disorder prediction 168 184 - -
Tan10g0157 354 SUPERFAMILY Leucine zipper domain 285 341 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g0157 354 MobiDBLite consensus disorder prediction 153 226 - -
Tan10g0157 354 Pfam Disordered region downstream of MFMR 133 259 - -
Tan10g0157 354 MobiDBLite consensus disorder prediction 202 226 - -
Tan10g0157 354 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 284 347 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g0157 354 MobiDBLite consensus disorder prediction 185 201 - -
Tan10g0157 354 MobiDBLite consensus disorder prediction 283 313 - -
Tan10g0157 354 MobiDBLite consensus disorder prediction 15 30 - -
Tan10g0157 354 Gene3D - 285 340 - -
Tan10g0157 354 CDD bZIP_plant_GBF1 287 335 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g0157 354 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Tan10g0157 354 MobiDBLite consensus disorder prediction 101 136 - -
Tan10g0157 354 SMART brlzneu 282 346 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g0157 354 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 289 304 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g0157 354 MobiDBLite consensus disorder prediction 1 30 - -
Tan10g0157 354 PANTHER G-BOX-BINDING FACTOR 3-RELATED 14 348 IPR044827 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g0156 Tan-Chr10:1737312 Tan10g0157 Tan-Chr10:1737312 1.40E-186 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28471 PF16596 MFMR_assoc 1.90E-19 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0157 K09060 - csv:101213720 574.704