Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g0157 | ATGGGGACTAGTGAAGAGCCAAAGGCTGTGAAACCTGAAAAACCATCTTCTCCAACGCAGGATCAGAACAACGGGTCGAATTCAGCCAGTATTCATGTTTTTCCTGATTGGGCAGCCATGCAGGCATATTATGGTCCTAGAGTTGCAGTTCCACCATACTACAACTCTGCTGTGGCTTCAGGCCATGCTCCTCACCCATATATGTGGGGCCCACCACAGATGATTCCTCCATATGGCACTCCTTATGCAGCAATCTATTCCCATGGAGGCGTTTATGCACATCCTGCAGTTTCCATGGGGCCCCATTCACATGGCCCAGGTCTTCCCTCATCACCTGCTCCTGCTGTAACTCCTTTGAGCATTGAAACACCTTCAAAGGGGTCTGGAAATAGCAGTCAAGGTTTAATGAAGAAACTGAAAGGTTTTGATGGCCTGGCAATGTCTATTGGCAATGTTAGTACTGAGAGTGCTGATGGGGGAGTTGAGCACGGACCATCAGAGAGTATGGAAACTGAAGGTTCCAGTGATGGAAGTGATGGAACTACTGCTGGGGAAAATCAAACCAAAAGGAAAAGAAGCCGTGAGGGAACACCTACCACTGGTAAGGATGCAAAAATTGAGACTCAGGGAAGTCCGGTTACTGCTGCTGAAATGAATGAAAGCTCTAGCAAGTTATTGGGCACAACCAAAGCAGCTGATGCAACTGGAAAGCTTGGATCTATGATTTCTCCTGGAATGTCTACAGCATTGGAACTTAGGAATCCTTCTAGTATAAACACCATTTCAGGTCAAACTAGCGTTCCGCCCTGTTCAGTATTGCCTTCTGAAGTCTGGCTACAGAATGAAAAAGAACTAAAACGGGAAAGGAGAAAACAGTCTAATAGAGAATCCGCTAGGAGGTCAAGGCTGAGGAAGCAGGCTGAAACTGAAGAACTAGCTCGTAAAGTCGATTCACTGACAGCGGAGAATGTCGCTCTTAGATCTGAAATAAGTAGATTGTCAGAGAATTCCGAGAAATTTAAGCAAGAAAACGCTACATTGATGGTGTGTTGCTGCCCTCTTTGA | 1065 | 46.01 | MGTSEEPKAVKPEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVASGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGLPSSPAPAVTPLSIETPSKGSGNSSQGLMKKLKGFDGLAMSIGNVSTESADGGVEHGPSESMETEGSSDGSDGTTAGENQTKRKRSREGTPTTGKDAKIETQGSPVTAAEMNESSSKLLGTTKAADATGKLGSMISPGMSTALELRNPSSINTISGQTSVPPCSVLPSEVWLQNEKELKRERRKQSNRESARRSRLRKQAETEELARKVDSLTAENVALRSEISRLSENSEKFKQENATLMVCCCPL | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1737312 | 1743574 | + | Tan0003522.2 | Tan10g0157 | 764951 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g0157 | 354 | MobiDBLite | consensus disorder prediction | 116 | 135 | - | - | |
Tan10g0157 | 354 | FunFam | G-box binding factor 3 | 285 | 340 | - | - | |
Tan10g0157 | 354 | Pfam | bZIP transcription factor | 282 | 344 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g0157 | 354 | Coils | Coil | 302 | 343 | - | - | |
Tan10g0157 | 354 | MobiDBLite | consensus disorder prediction | 168 | 184 | - | - | |
Tan10g0157 | 354 | SUPERFAMILY | Leucine zipper domain | 285 | 341 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g0157 | 354 | MobiDBLite | consensus disorder prediction | 153 | 226 | - | - | |
Tan10g0157 | 354 | Pfam | Disordered region downstream of MFMR | 133 | 259 | - | - | |
Tan10g0157 | 354 | MobiDBLite | consensus disorder prediction | 202 | 226 | - | - | |
Tan10g0157 | 354 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 284 | 347 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g0157 | 354 | MobiDBLite | consensus disorder prediction | 185 | 201 | - | - | |
Tan10g0157 | 354 | MobiDBLite | consensus disorder prediction | 283 | 313 | - | - | |
Tan10g0157 | 354 | MobiDBLite | consensus disorder prediction | 15 | 30 | - | - | |
Tan10g0157 | 354 | Gene3D | - | 285 | 340 | - | - | |
Tan10g0157 | 354 | CDD | bZIP_plant_GBF1 | 287 | 335 | IPR045314 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g0157 | 354 | Pfam | G-box binding protein MFMR | 1 | 97 | IPR012900 | - | |
Tan10g0157 | 354 | MobiDBLite | consensus disorder prediction | 101 | 136 | - | - | |
Tan10g0157 | 354 | SMART | brlzneu | 282 | 346 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g0157 | 354 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 289 | 304 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g0157 | 354 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Tan10g0157 | 354 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 14 | 348 | IPR044827 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan10g0156 | Tan-Chr10:1737312 | Tan10g0157 | Tan-Chr10:1737312 | 1.40E-186 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28471 | PF16596 | MFMR_assoc | 1.90E-19 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g0157 | K09060 | - | csv:101213720 | 574.704 |