Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0201 ATGACGGTTGTGAGTTCTATGCAAGAAACTACACCTCGAGCTGGTCCAACTAATTATGCTGAAGCTTCACCAATTATGATCAGCTCAAGCAGAGAGATTGTAGAAGAGCCAGTGGGAGCTATTAGTGATGATATAATTTGTGTTGCTCTTGGGAAAGATGTGAAAGAGTGCTTATCAGTTTTGAGGTATGCGCTAAAATCCTCACGTGGGAAGAAGATTTGCCTCCTCCATGTTCATGTCCCTGCACAGATGATTCCATTAATGGGAACCAGATTTCCAGCAAACTCATTACAGAAAGAGGAAGTGAGAGCATATCATGAGTTTGAGAAGCAAAATTTGCCGAGGGTCATGAATGAGTATATTCTATATTGTCTTCAAGAAGGGGTTCAAGCTGAGAGGTCATGTGCTGAAGCTGAGAGTATTGAAAAGGGAATAGTTGATATGATTTCCCTGCACGGGATTAAAAAGCTTGTTATGGGAGCAGCTGTAGACAAGTGCTATTCGAGGAGAATGGTGGATCTGAGGTCTAGGAAAGCCATTTATGTCCGTTCACAGGCACCGGCTTTCTGTCACATTGAGTTTATTTGCAAGGGGAACCTCATCTGCACCAGGGAGGGTAGATCAGATGGAGCTCAAGTAGAAGCCGCCGTCTCATCACCACAAACAAGTCCAGATGCTGAAGCCTCAGAAATTGCCAACCGAAGATCTCGCTCACTGCCACTGGGGCAGGTTAATAGCAGGGAAGTGGGAAGTCCATCTTCATATTTACGTCCTGGAGGGAGATCGTTGCTTGTTGACCATTTTAGAGGCAGTATACTAGAACCTTCTCCTTCTCCAGATATTATGAATGGGGTTCGCAATGCAAGAAACTTGGATGTTAACGAGGCTTTTGACGAATGGGGTTTATTGGCAAGGAGAAGTCCTTATGAAACATCAGACAAGTCCTTACCCTCTCCTCGTGGTGTGATTGACGTGGCTCCTTCTCCACTTTCCAGGGTTGAGTTATGTGAAAATGGGCTGGAGGATGGGAAAACCAGTGATTGCCTTTACAATCAATGTGAACGGGTGATGATGGAGGCTGCAAATGCGAGGCGTGATGCATTTTTAGAGGCAATTGCACGTAGAAAATCGGAGAAAGAGACTGTTAACGCTCTACGCAGGGTTAAAGCTGCAGAAGAGTTATATGCTGAAGAACTGAAACAAAGGAAGGAGGTGGAACAAGAACTAGCAAGGGAAAAGGCAAAACTTGAAAGCATAAAGAAGCAACTAAATGAAGAGATGGAAGAGCTCCGGATAGCCCAAGATCAGAAGGCAAGTCTCGAGAGGGAACTTTTAGAATCTGATCTAACGGCGAAGGAGTTGGAGCAAAGGATTCTTTCTGCTGTTGAATTGTTACAGAGTTACAAAAGAGAGCGAGAGGAGTTGCAGATTCAACGTGACAATGCGCTTATAGAAGCAGAGGAGCTTAGAAAAAATCAATCCACAAGCGGATACCTTCCACAGTTCCTTACCGAGTTCCCATTTCGGGAGATTGAGGAAGCAACTAGAAACTTCGATCCCTCCCTGAAGATTGGAGAAGGGGGATATGGGAGTATATTTAAAGGTTTCTTGCGTCATACTATGGTGGCTATAAAAATCTTACATTCTGATAGCTCTCAAGGCCCCTCTGAATTTCAACAAGAGGTTAATGTTTTGAGTAAGATGAGACATCCCAATCTTGTCACGCTTATTGGAGCCTGTCCTGAAGCTTGGGTTCTCATCTACGAATACCTCTGTAATGGAAGCCTCGAAGATAGGTTCAGCTGCAAGGACAATACTCCGCCTTTATCTTGGCAAACGAGAATACGCATCGCCACTGAGTTATGCTCGGCCCTTATGTTTCTTCACTCAAGTAAGCCCCACAGCATCATTCACGGTGACTTGAAACCTGCAAACGTATTACTTGATGCAAACTTTGTATGCAAGCTTGGTGACTTCGGAATTTGTCGCTTATTGTCTCGGGATGAAATGGTAAACAACTATGGAACACTTGTTTGGAGAACTGACAACCCCAAGGGAACTTTTGCTTACATGGATCCTGAATTCCTTTCATCTGGAGAGCTAACAACAAAGTCAGATGTTTATTCGTTCGGGATAATACTGTTACGATTATTGACCGGTAGATCTGCAATAGGGATATCAAAGGAAGTCCAATATGCAATGGGAAATGGAAAGTTAAAATCCATTTTGGATCCTTTAGCGGGAGATTGGCCATTCGTGCAGGCCGAACAGCTCGCTCGATTGGCATTGAGGTGTTGTGATATGAACCGCAAGAGTCGCCCTGATCTCATTACTGATGTCTGGAGGGTGCTTGAACCAATGAGAGCTTCCTGCGGGAGCTTACTGTCCATCCAGCTCGGTTCTGCCGAACACTTGCAACCTCCCCCATATTTTATCTGTCCTATCTTTCAGGAAGTCATGCAGGATCCTCATGTGGCTGCAGATGGTTTCACATATGAAGTAGAGGCCGTGAGAGGATGGCTAGACAGTGGACATGATACTTCGCCAATGACAAATCTTAGGCTCGAGCATCGCAACCTTGTCCCAAACCGCGCCCTTCGTTCGGCTATCCAGGAGTGGCTCCAAAGGAAATGA 2634 45.03 MTVVSSMQETTPRAGPTNYAEASPIMISSSREIVEEPVGAISDDIICVALGKDVKECLSVLRYALKSSRGKKICLLHVHVPAQMIPLMGTRFPANSLQKEEVRAYHEFEKQNLPRVMNEYILYCLQEGVQAERSCAEAESIEKGIVDMISLHGIKKLVMGAAVDKCYSRRMVDLRSRKAIYVRSQAPAFCHIEFICKGNLICTREGRSDGAQVEAAVSSPQTSPDAEASEIANRRSRSLPLGQVNSREVGSPSSYLRPGGRSLLVDHFRGSILEPSPSPDIMNGVRNARNLDVNEAFDEWGLLARRSPYETSDKSLPSPRGVIDVAPSPLSRVELCENGLEDGKTSDCLYNQCERVMMEAANARRDAFLEAIARRKSEKETVNALRRVKAAEELYAEELKQRKEVEQELAREKAKLESIKKQLNEEMEELRIAQDQKASLERELLESDLTAKELEQRILSAVELLQSYKREREELQIQRDNALIEAEELRKNQSTSGYLPQFLTEFPFREIEEATRNFDPSLKIGEGGYGSIFKGFLRHTMVAIKILHSDSSQGPSEFQQEVNVLSKMRHPNLVTLIGACPEAWVLIYEYLCNGSLEDRFSCKDNTPPLSWQTRIRIATELCSALMFLHSSKPHSIIHGDLKPANVLLDANFVCKLGDFGICRLLSRDEMVNNYGTLVWRTDNPKGTFAYMDPEFLSSGELTTKSDVYSFGIILLRLLTGRSAIGISKEVQYAMGNGKLKSILDPLAGDWPFVQAEQLARLALRCCDMNRKSRPDLITDVWRVLEPMRASCGSLLSIQLGSAEHLQPPPYFICPIFQEVMQDPHVAADGFTYEVEAVRGWLDSGHDTSPMTNLRLEHRNLVPNRALRSAIQEWLQRK 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1942238 1947271 - Tan0000613.1 Tan10g0201 764995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0201 877 Coils Coil 388 492 - -
Tan10g0201 877 PANTHER OS02G0152300 PROTEIN 47 871 IPR051348 -
Tan10g0201 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g0201 877 SMART Ubox_2 810 873 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Tan10g0201 877 ProSiteProfiles U-box domain profile. 806 877 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Tan10g0201 877 SUPERFAMILY RING/U-box 802 876 - -
Tan10g0201 877 Gene3D Phosphorylase Kinase; domain 1 498 590 - -
Tan10g0201 877 Pfam U-box domain 808 877 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Tan10g0201 877 MobiDBLite consensus disorder prediction 214 229 - -
Tan10g0201 877 ProSiteProfiles Protein kinase domain profile. 518 811 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0201 877 Gene3D Transferase(Phosphotransferase) domain 1 591 794 - -
Tan10g0201 877 MobiDBLite consensus disorder prediction 236 252 - -
Tan10g0201 877 CDD RING-Ubox_WDSUB1-like 808 863 - -
Tan10g0201 877 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 491 590 - -
Tan10g0201 877 MobiDBLite consensus disorder prediction 213 255 - -
Tan10g0201 877 CDD STK_N 48 198 - -
Tan10g0201 877 Pfam Protein kinase domain 523 775 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0201 877 SMART serkin_6 518 787 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0201 877 ProSitePatterns Protein kinases ATP-binding region signature. 524 545 IPR017441 GO:0005524(InterPro)
Tan10g0201 877 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 806 877 IPR013083 -
Tan10g0201 877 SUPERFAMILY Protein kinase-like (PK-like) 492 784 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0232 Tan-Chr1:2039938 Tan10g0201 Tan-Chr10:1942238 2.00E-142 dispersed
Tan01g0233 Tan-Chr1:2039938 Tan10g0201 Tan-Chr10:1942238 2.90E-129 dispersed
Tan05g0388 Tan-Chr5:2804952 Tan10g0201 Tan-Chr10:1942238 8.80E-109 dispersed
Tan05g0389 Tan-Chr5:2804952 Tan10g0201 Tan-Chr10:1942238 1.20E-106 dispersed
Tan06g2031 Tan-Chr6:65835168 Tan10g0201 Tan-Chr10:1942238 2.40E-150 dispersed
Tan08g0926 Tan-Chr8:13186541 Tan10g0201 Tan-Chr10:1942238 6.10E-77 dispersed
Tan10g0201 Tan-Chr10:1942238 Tan01g1039 Tan-Chr1:10185578 6.30E-48 dispersed
Tan10g0201 Tan-Chr10:1942238 Tan05g0385 Tan-Chr5:2804952 5.40E-132 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68109 PF00069 Pkinase 1.10E-41 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0201 - - - 0.0