Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g0201 | ATGACGGTTGTGAGTTCTATGCAAGAAACTACACCTCGAGCTGGTCCAACTAATTATGCTGAAGCTTCACCAATTATGATCAGCTCAAGCAGAGAGATTGTAGAAGAGCCAGTGGGAGCTATTAGTGATGATATAATTTGTGTTGCTCTTGGGAAAGATGTGAAAGAGTGCTTATCAGTTTTGAGGTATGCGCTAAAATCCTCACGTGGGAAGAAGATTTGCCTCCTCCATGTTCATGTCCCTGCACAGATGATTCCATTAATGGGAACCAGATTTCCAGCAAACTCATTACAGAAAGAGGAAGTGAGAGCATATCATGAGTTTGAGAAGCAAAATTTGCCGAGGGTCATGAATGAGTATATTCTATATTGTCTTCAAGAAGGGGTTCAAGCTGAGAGGTCATGTGCTGAAGCTGAGAGTATTGAAAAGGGAATAGTTGATATGATTTCCCTGCACGGGATTAAAAAGCTTGTTATGGGAGCAGCTGTAGACAAGTGCTATTCGAGGAGAATGGTGGATCTGAGGTCTAGGAAAGCCATTTATGTCCGTTCACAGGCACCGGCTTTCTGTCACATTGAGTTTATTTGCAAGGGGAACCTCATCTGCACCAGGGAGGGTAGATCAGATGGAGCTCAAGTAGAAGCCGCCGTCTCATCACCACAAACAAGTCCAGATGCTGAAGCCTCAGAAATTGCCAACCGAAGATCTCGCTCACTGCCACTGGGGCAGGTTAATAGCAGGGAAGTGGGAAGTCCATCTTCATATTTACGTCCTGGAGGGAGATCGTTGCTTGTTGACCATTTTAGAGGCAGTATACTAGAACCTTCTCCTTCTCCAGATATTATGAATGGGGTTCGCAATGCAAGAAACTTGGATGTTAACGAGGCTTTTGACGAATGGGGTTTATTGGCAAGGAGAAGTCCTTATGAAACATCAGACAAGTCCTTACCCTCTCCTCGTGGTGTGATTGACGTGGCTCCTTCTCCACTTTCCAGGGTTGAGTTATGTGAAAATGGGCTGGAGGATGGGAAAACCAGTGATTGCCTTTACAATCAATGTGAACGGGTGATGATGGAGGCTGCAAATGCGAGGCGTGATGCATTTTTAGAGGCAATTGCACGTAGAAAATCGGAGAAAGAGACTGTTAACGCTCTACGCAGGGTTAAAGCTGCAGAAGAGTTATATGCTGAAGAACTGAAACAAAGGAAGGAGGTGGAACAAGAACTAGCAAGGGAAAAGGCAAAACTTGAAAGCATAAAGAAGCAACTAAATGAAGAGATGGAAGAGCTCCGGATAGCCCAAGATCAGAAGGCAAGTCTCGAGAGGGAACTTTTAGAATCTGATCTAACGGCGAAGGAGTTGGAGCAAAGGATTCTTTCTGCTGTTGAATTGTTACAGAGTTACAAAAGAGAGCGAGAGGAGTTGCAGATTCAACGTGACAATGCGCTTATAGAAGCAGAGGAGCTTAGAAAAAATCAATCCACAAGCGGATACCTTCCACAGTTCCTTACCGAGTTCCCATTTCGGGAGATTGAGGAAGCAACTAGAAACTTCGATCCCTCCCTGAAGATTGGAGAAGGGGGATATGGGAGTATATTTAAAGGTTTCTTGCGTCATACTATGGTGGCTATAAAAATCTTACATTCTGATAGCTCTCAAGGCCCCTCTGAATTTCAACAAGAGGTTAATGTTTTGAGTAAGATGAGACATCCCAATCTTGTCACGCTTATTGGAGCCTGTCCTGAAGCTTGGGTTCTCATCTACGAATACCTCTGTAATGGAAGCCTCGAAGATAGGTTCAGCTGCAAGGACAATACTCCGCCTTTATCTTGGCAAACGAGAATACGCATCGCCACTGAGTTATGCTCGGCCCTTATGTTTCTTCACTCAAGTAAGCCCCACAGCATCATTCACGGTGACTTGAAACCTGCAAACGTATTACTTGATGCAAACTTTGTATGCAAGCTTGGTGACTTCGGAATTTGTCGCTTATTGTCTCGGGATGAAATGGTAAACAACTATGGAACACTTGTTTGGAGAACTGACAACCCCAAGGGAACTTTTGCTTACATGGATCCTGAATTCCTTTCATCTGGAGAGCTAACAACAAAGTCAGATGTTTATTCGTTCGGGATAATACTGTTACGATTATTGACCGGTAGATCTGCAATAGGGATATCAAAGGAAGTCCAATATGCAATGGGAAATGGAAAGTTAAAATCCATTTTGGATCCTTTAGCGGGAGATTGGCCATTCGTGCAGGCCGAACAGCTCGCTCGATTGGCATTGAGGTGTTGTGATATGAACCGCAAGAGTCGCCCTGATCTCATTACTGATGTCTGGAGGGTGCTTGAACCAATGAGAGCTTCCTGCGGGAGCTTACTGTCCATCCAGCTCGGTTCTGCCGAACACTTGCAACCTCCCCCATATTTTATCTGTCCTATCTTTCAGGAAGTCATGCAGGATCCTCATGTGGCTGCAGATGGTTTCACATATGAAGTAGAGGCCGTGAGAGGATGGCTAGACAGTGGACATGATACTTCGCCAATGACAAATCTTAGGCTCGAGCATCGCAACCTTGTCCCAAACCGCGCCCTTCGTTCGGCTATCCAGGAGTGGCTCCAAAGGAAATGA | 2634 | 45.03 | MTVVSSMQETTPRAGPTNYAEASPIMISSSREIVEEPVGAISDDIICVALGKDVKECLSVLRYALKSSRGKKICLLHVHVPAQMIPLMGTRFPANSLQKEEVRAYHEFEKQNLPRVMNEYILYCLQEGVQAERSCAEAESIEKGIVDMISLHGIKKLVMGAAVDKCYSRRMVDLRSRKAIYVRSQAPAFCHIEFICKGNLICTREGRSDGAQVEAAVSSPQTSPDAEASEIANRRSRSLPLGQVNSREVGSPSSYLRPGGRSLLVDHFRGSILEPSPSPDIMNGVRNARNLDVNEAFDEWGLLARRSPYETSDKSLPSPRGVIDVAPSPLSRVELCENGLEDGKTSDCLYNQCERVMMEAANARRDAFLEAIARRKSEKETVNALRRVKAAEELYAEELKQRKEVEQELAREKAKLESIKKQLNEEMEELRIAQDQKASLERELLESDLTAKELEQRILSAVELLQSYKREREELQIQRDNALIEAEELRKNQSTSGYLPQFLTEFPFREIEEATRNFDPSLKIGEGGYGSIFKGFLRHTMVAIKILHSDSSQGPSEFQQEVNVLSKMRHPNLVTLIGACPEAWVLIYEYLCNGSLEDRFSCKDNTPPLSWQTRIRIATELCSALMFLHSSKPHSIIHGDLKPANVLLDANFVCKLGDFGICRLLSRDEMVNNYGTLVWRTDNPKGTFAYMDPEFLSSGELTTKSDVYSFGIILLRLLTGRSAIGISKEVQYAMGNGKLKSILDPLAGDWPFVQAEQLARLALRCCDMNRKSRPDLITDVWRVLEPMRASCGSLLSIQLGSAEHLQPPPYFICPIFQEVMQDPHVAADGFTYEVEAVRGWLDSGHDTSPMTNLRLEHRNLVPNRALRSAIQEWLQRK | 877 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1942238 | 1947271 | - | Tan0000613.1 | Tan10g0201 | 764995 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g0201 | 877 | Coils | Coil | 388 | 492 | - | - | |
Tan10g0201 | 877 | PANTHER | OS02G0152300 PROTEIN | 47 | 871 | IPR051348 | - | |
Tan10g0201 | 877 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 636 | 648 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan10g0201 | 877 | SMART | Ubox_2 | 810 | 873 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Tan10g0201 | 877 | ProSiteProfiles | U-box domain profile. | 806 | 877 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Tan10g0201 | 877 | SUPERFAMILY | RING/U-box | 802 | 876 | - | - | |
Tan10g0201 | 877 | Gene3D | Phosphorylase Kinase; domain 1 | 498 | 590 | - | - | |
Tan10g0201 | 877 | Pfam | U-box domain | 808 | 877 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Tan10g0201 | 877 | MobiDBLite | consensus disorder prediction | 214 | 229 | - | - | |
Tan10g0201 | 877 | ProSiteProfiles | Protein kinase domain profile. | 518 | 811 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g0201 | 877 | Gene3D | Transferase(Phosphotransferase) domain 1 | 591 | 794 | - | - | |
Tan10g0201 | 877 | MobiDBLite | consensus disorder prediction | 236 | 252 | - | - | |
Tan10g0201 | 877 | CDD | RING-Ubox_WDSUB1-like | 808 | 863 | - | - | |
Tan10g0201 | 877 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 491 | 590 | - | - | |
Tan10g0201 | 877 | MobiDBLite | consensus disorder prediction | 213 | 255 | - | - | |
Tan10g0201 | 877 | CDD | STK_N | 48 | 198 | - | - | |
Tan10g0201 | 877 | Pfam | Protein kinase domain | 523 | 775 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g0201 | 877 | SMART | serkin_6 | 518 | 787 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g0201 | 877 | ProSitePatterns | Protein kinases ATP-binding region signature. | 524 | 545 | IPR017441 | GO:0005524(InterPro) | |
Tan10g0201 | 877 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 806 | 877 | IPR013083 | - | |
Tan10g0201 | 877 | SUPERFAMILY | Protein kinase-like (PK-like) | 492 | 784 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0232 | Tan-Chr1:2039938 | Tan10g0201 | Tan-Chr10:1942238 | 2.00E-142 | dispersed | |
Tan01g0233 | Tan-Chr1:2039938 | Tan10g0201 | Tan-Chr10:1942238 | 2.90E-129 | dispersed | |
Tan05g0388 | Tan-Chr5:2804952 | Tan10g0201 | Tan-Chr10:1942238 | 8.80E-109 | dispersed | |
Tan05g0389 | Tan-Chr5:2804952 | Tan10g0201 | Tan-Chr10:1942238 | 1.20E-106 | dispersed | |
Tan06g2031 | Tan-Chr6:65835168 | Tan10g0201 | Tan-Chr10:1942238 | 2.40E-150 | dispersed | |
Tan08g0926 | Tan-Chr8:13186541 | Tan10g0201 | Tan-Chr10:1942238 | 6.10E-77 | dispersed | |
Tan10g0201 | Tan-Chr10:1942238 | Tan01g1039 | Tan-Chr1:10185578 | 6.30E-48 | dispersed | |
Tan10g0201 | Tan-Chr10:1942238 | Tan05g0385 | Tan-Chr5:2804952 | 5.40E-132 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68109 | PF00069 | Pkinase | 1.10E-41 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g0201 | - | - | - | 0.0 |