Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0235 ATGGCATCAAGTTTGGGAGGGGCATCGATGTCGCAAACAGATGACTTTGAGACGTTCACTCCAACGTCTGATGTTGAGCCTTTAAAGAGGGCCTGGCGTAATGAAAAGGCTGCTCCTGAGATTCTACAATTTGAGGCATCTTTGGTTGGGAGAATTAAAGAGCAGATTCAACTAATGGAAGGAAATATAGAGGAATATTCAAGAAGTGGTACCGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTATTGAGATCATATATTAGGATTCGATTGCAGAAGATCGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCTGAAGAAGAGATAAGATTTACTGATAGATGTATTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCTAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCACCACTGGACACATTTGTGGTCTGCAAAAGTAAGGAATATCTGGAACATATACAGCTTGAGGATGAGGAAGAGAGGGCATCTAGTAGAATAGAGGAACCTTTTGAGATGGAGGCCAATGTATTACACATTATCCGCTACAAGCCCATAAAATCACTCGTAGAGAGCGGGAGAATCGATTTGCTGTAG 690 39.42 MASSLGGASMSQTDDFETFTPTSDVEPLKRAWRNEKAAPEILQFEASLVGRIKEQIQLMEGNIEEYSRSGTDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSEEEIRFTDRCIHDMKKHFDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2107742 2110405 + Tan0016854.1 Tan10g0235 765029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0235 229 PANTHER SLD5 PROTEIN 11 229 IPR008591 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro)
Tan10g0235 229 CDD GINS_B_Sld5 168 229 IPR031633 -
Tan10g0235 229 CDD GINS_A_Sld5 24 142 IPR038749 -
Tan10g0235 229 MobiDBLite consensus disorder prediction 1 20 - -
Tan10g0235 229 MobiDBLite consensus disorder prediction 1 22 - -
Tan10g0235 229 SUPERFAMILY PriA/YqbF domain 170 229 - -
Tan10g0235 229 PIRSF GINS_Sld5 1 229 IPR008591 GO:0006261(InterPro)
Tan10g0235 229 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 229 IPR031633 -
Tan10g0235 229 Pfam GINS complex protein helical bundle domain 76 138 IPR021151 -
Tan10g0235 229 Gene3D - 10 219 - -
Tan10g0235 229 FunFam DNA replication complex GINS protein SLD5 9 219 - -
Tan10g0235 229 SUPERFAMILY GINS helical bundle-like 20 154 IPR036224 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0235 K10735 - csv:101210888 419.083