Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan10g0325 | ATGGAAATGGATATCAATATCTTCACCGCCTTTTCCTTCATATTATTATTCACACTCTCCCTCTTCTTTCTCTCCTTCTTGATTCTCCTCCTTCGAACCTTCGCAGGAAAATCCATAATAAAATCCGACTACGCGCCGGTGTACGGCACCATCTACGGTCAGGCTTTTTACTTCCACAACCTCCACGATCATCTAACGGCGGTGGCGAAGCGGCACCGAACCTTCCGGCTGCTTGGGCCGGCGTACAGCGAGATATACACGGTCGATCCGAGAAACGTTGAGCACATATTGAAGACGAAATTTGACAAGTACGCGAAAGGAAGAAAAGATCAAGAAATCTCTGGGGATCTGTTTGGAGAGGGAATATTTGCAGTGGATGGAGAAAAGTGGAAGCAGCAGCGGAAATTGGCTAGCTATGAATTCTCGACGAGGGTTCTTAGGGATTTTAGCTGCTCTGTTTTCAGAAGAAATGCTGCTAAACTTGTGGGAGTTCTTTCGGAGTTCTCCACCACGGGTCGGGATTTCAATATCCAGGATTTGCTAATGCGATGCTCTTTGGACTCCATTTTCAAAGTTGGGTTCGGCGTGGATTTAAATTGCTTGGAGGAACCAAGCAAAGCAGGGAGCGGGTTCATGAAGGCCTTTGATGATTCTAGCGCTCAGATTTTTTGGCGCTATATTGATCCTTTCTGGAAATTGAAAAGATTTCTCAACATCGGTTCCGAAGCTTCATTTAGGAACAACGTCAAAGTCATCGATGCTTTTGTGCACCAGTTGATCAGTGGTCGGAGAAAATTGCTTCAGCAACCAAACCTCAAGAATGACAAAGAGGACATACTTTCGAGGTTTCTGATGGAAAGTGAGAAGGATCCAACAAGAATGAATGATCAATATCTAAGAGATATAGTCCTGAATTTCATGTTGGCTGGCAAGGATACAACTGCAGGAACTCTGTCTTGGTTCTTCTACATGCTATGCAAGAACCCTTTAATTCAGGAAAAAGTTGCAGAAGAAGTGAGGCAAATTGTTGGGGTTCAAAGGGAAGAAGCTGATATTGATTATGATTTGTTCGTACAAAATTTAACTGATTCAGCTCTGGACAAAATGCATTATCTTCATGCAGCATTGGCAGAGACTCTGAGGCTTTATCCTGCAGTCCCCTTGGATGGAAGGACTGCAGAAATAGATGACATTCTTCCTGATGGCTATAAACTTAGAAAAGGGGATGGAGTATACTACTTGGCCTATTCCATGGGCAGGATGCCCTGCCTTTGGGGAGAAGATGCCGAAGATTTTAAACCTGAGAGATGGCTTGAAAATGGAACTTTTCGACCCGAATCGCCTTTTAAATTCATCGCATTTCATGCGGGTCCTCGAATGTGCTTGGGAAAAGAGTTTGCTTATCGACAAATGAAGATAATGTCTGCTGCTCTGCTTCACTTTTTTCGATTCAAATTAGCTGATCCAACAAGAAAGGAATTCAAATTCATTTCCGTCCAACGTTCCCAATTCCCTCGCTTTGCTCCTTCCCCACATTTCTTGCCATCGGAGTTCTACGGTGGCGAACCGATGAAATCTCTGGCGAAGGACGAAAATGAATCTCCGAAGCGGCAATGGTCCTTGCAAGACTTCGACGTAGGAAAGCCCCTCGGTAAAGGAAAATTCGGCAGAGTCTATCTAGCAAGGGAAGTCAAGGAGCTTCGATTTGATTTTCAGAGCAAGTACATAGTGGCACTGAAGGTGATTTTTAAGGAGCAGATGGAGAAGTACAGGATTCATCATCAGTTAAGGAGAGAGATGGAGATCCAGACCAGTCTCCGGCATCCCAACATCCTGCGCCTCTATGGATGGTTTCATGATGCTGAACGGATTTTCTTGATATTGGAATACGCTCACCGCGGCGAGCTTTATAGGGAACTTAGGAAAAGTGGTCATCTCAGCGAGAAACAAGCCGCCACTTACATTTTAAGCCTCACACAAGCACTGGCATACTGCCATGAGAAGCATGTGATTCACCGGGACATTAAGCCAGAAAATTTGCTGCTTGATCATGAGGGCCGGTTGAAAATTGCAGATTTTGGATGGTCTGTACAGTCAAGAAGTAAGAGACATACTATGTGTGGAACTCTGGATTATTTAGCCCCAGAAATGGTAGAGAATAAAGCTCACGACTATGCAGTAGATAATTGGACTTTGGGCATCCTTTGCTATGAGTTCCTTTATGGACTGCCTCCATTTGAGGCTGAAAGTCAAAGTGACACGTTTAAAAGGATAATGAAGGTTGACTTGAATTTTCCTTTGACCCCTCAAGTTTCTTCCGAAGCAAAAGATCTAATTGGCCGGCTCTTGGTGAAGGATTCCTCTAAAAGGCTTTCACTTCAGAAGATAGTGGAGCATCCTTGGATAATCAAGAATGCAGATCCATCTGGTATTTGCAATAATAGGTAG | 2448 | 44.08 | MEMDINIFTAFSFILLFTLSLFFLSFLILLLRTFAGKSIIKSDYAPVYGTIYGQAFYFHNLHDHLTAVAKRHRTFRLLGPAYSEIYTVDPRNVEHILKTKFDKYAKGRKDQEISGDLFGEGIFAVDGEKWKQQRKLASYEFSTRVLRDFSCSVFRRNAAKLVGVLSEFSTTGRDFNIQDLLMRCSLDSIFKVGFGVDLNCLEEPSKAGSGFMKAFDDSSAQIFWRYIDPFWKLKRFLNIGSEASFRNNVKVIDAFVHQLISGRRKLLQQPNLKNDKEDILSRFLMESEKDPTRMNDQYLRDIVLNFMLAGKDTTAGTLSWFFYMLCKNPLIQEKVAEEVRQIVGVQREEADIDYDLFVQNLTDSALDKMHYLHAALAETLRLYPAVPLDGRTAEIDDILPDGYKLRKGDGVYYLAYSMGRMPCLWGEDAEDFKPERWLENGTFRPESPFKFIAFHAGPRMCLGKEFAYRQMKIMSAALLHFFRFKLADPTRKEFKFISVQRSQFPRFAPSPHFLPSEFYGGEPMKSLAKDENESPKRQWSLQDFDVGKPLGKGKFGRVYLAREVKELRFDFQSKYIVALKVIFKEQMEKYRIHHQLRREMEIQTSLRHPNILRLYGWFHDAERIFLILEYAHRGELYRELRKSGHLSEKQAATYILSLTQALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGLPPFEAESQSDTFKRIMKVDLNFPLTPQVSSEAKDLIGRLLVKDSSKRLSLQKIVEHPWIIKNADPSGICNNR | 815 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 2709173 | 2718948 | + | Tan0006878.1 | Tan10g0325 | 765119 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan10g0325 | 815 | PANTHER | CYTOCHROME P450 | 27 | 489 | - | - | |
| Tan10g0325 | 815 | Gene3D | Phosphorylase Kinase; domain 1 | 532 | 634 | - | - | |
| Tan10g0325 | 815 | Pfam | Protein kinase domain | 545 | 802 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Tan10g0325 | 815 | ProSitePatterns | Protein kinases ATP-binding region signature. | 550 | 580 | IPR017441 | GO:0005524(InterPro) | |
| Tan10g0325 | 815 | Pfam | Cytochrome P450 | 51 | 495 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | Gene3D | Transferase(Phosphotransferase) domain 1 | 635 | 811 | - | - | |
| Tan10g0325 | 815 | PRINTS | P450 superfamily signature | 374 | 385 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | Gene3D | Cytochrome P450 | 45 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | FunFam | Serine/threonine-protein kinase ark1 | 536 | 814 | - | - | |
| Tan10g0325 | 815 | CDD | STKc_Aurora | 543 | 802 | - | - | |
| Tan10g0325 | 815 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan10g0325 | 815 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 670 | 682 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Tan10g0325 | 815 | SUPERFAMILY | Cytochrome P450 | 45 | 496 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | SUPERFAMILY | Protein kinase-like (PK-like) | 535 | 806 | IPR011009 | - | |
| Tan10g0325 | 815 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | PRINTS | E-class P450 group I signature | 373 | 391 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan10g0325 | 815 | SMART | serkin_6 | 544 | 802 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Tan10g0325 | 815 | FunFam | Aurora kinase A | 536 | 634 | - | - | |
| Tan10g0325 | 815 | CDD | CYP86A | 73 | 496 | - | - | |
| Tan10g0325 | 815 | ProSiteProfiles | Protein kinase domain profile. | 544 | 802 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g3907 | Tan-Chr1:104041169 | Tan10g0325 | Tan-Chr10:2709173 | 2.20E-106 | dispersed | |
| Tan09g2184 | Tan-Chr9:71899468 | Tan10g0325 | Tan-Chr10:2709173 | 2.80E-42 | dispersed | |
| Tan09g2367 | Tan-Chr9:73398559 | Tan10g0325 | Tan-Chr10:2709173 | 1.60E-80 | dispersed | |
| Tan10g0325 | Tan-Chr10:2709173 | Tan10g0764 | Tan-Chr10:6327613 | 1.70E-39 | dispersed | |
| Tan10g0318 | Tan-Chr10:2638667 | Tan10g0325 | Tan-Chr10:2709173 | 3.30E-134 | proximal |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 68113 | PF00067 | p450 | 3.10E-76 | No_clan | Tan | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan10g0325 | - | - | - | 0.0 |