Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0332 ATGGAGACCAATCCCGCTGCCGCGGTCGTTAGCAATACCCCAAGCATTCCGCCGGAGAAACGGAACCGTTCCATCTTCAACGTCCCGCCGGACTTCTTCGATTCTTGCAAACTCCTTCGTTCTCCATATTCACACACCTCATCAACCAGCGGCAGCTACAGGGACAGCTCAAGCGCAGAAGCAGTTGATTCGGAGCAGAACTCTAGGGATTTCAAAGAAAGCTCCGTCGCCCACAGATGGACCTGCAACACATGCAAGGCCGAGTTCGAATCCCTCCTCGACCAGCGTTCGCACTTCAAATCCGACCTTCACCGGTTCAATGTGAAACTGAGCATTGCTGGAAAGAATATTGTGAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTATGACGTGTCAAGTATTTCTGGATCAGAGGATGAAACAGAGAAGGAGATTTACTCTCGGAATGAAGCGTCTAAGGGAACAAGTGATAATATGAACAAGAAGAGGTTGTTTGTTCATCTTCAAACAGGTGAAAGAGTTTCGGTTTGGAAGTGTTTGCTCATAAATGAGTCAGATAGTATTTCGTATGAGGATGACAAAACATCAGTCAGTGGTAATGGTGTTCATGCACAGTACCTTAGAGAGAATGAAGTCATAGCAAGATTAAAATATTTAAATCACGAGCCAAGAGATGGCACCCATTTGCGGATAGTGTTGCTTGCAAGTGGTGGTCACTTTGCTGGTTGTGTTTTTGATGGGAACTTGGTTGTAGCTCATAAAACCTTTCACAGATATGTGGTGAGAGCCAAGTCTGGAAAGAAGCAGTCATCAAAAGATGCAAGTGGCAAGACAATCAATTCTGCTGGCGCTTCACTTCGTCGTCATAATGAACTGGCGTTGAAGAAGGAAATTCAAGATCTCCTTGCTGGTTGGAAGTCCTATTTTAATGCTACATCTTGCGTTTATATTTATGCTCCTTCAAACAATCGGCAATTGCTTTTTAATGGGGATAAGCCGTATTTTAGTGATCAGCACTCTTCTGTTCGGAATATTCCTTTGACTGTTAGAAGGCCTACATTGAAAGAAGCCCGGCGTGTTTATGAACAATTGGTGCAAGTAGTGTATGAAGTAGACGAGAAGGAAATATTGACCACCAGTGAGCACGATTCACCGTTAAGTGCAGTAACAACAGACAATGGCACCCAAGATACAAGTGGAAAAAAAGTCATTGGAGACTTGGAAAAAGATGCCTGTACACATCTTGAAGAATCTATTGAACGCCGCATAACTAGTGAGAGTGAAAGTGAAGTTATTTGTAGAACTACACCTTTGCATGAAGCATCAGAGTCTGGAAATGCAGATAAAGTTTTGGAACTCCTTGAACAGGGTCTTGATCCCTGCATCAAAGACGAAAGAGGGCGTACTCCTTACATGCTAGCAAGTGAGAAGGAAGTCCGGAATAACTTTAGAAGGTTCATGGCTTCAAACCTTGATAAGTGGGATTGGAATTCTGCTAAGGTGCCCAGTGCATTAACCAAGGAAATGGAGGAATCTCAAGCTGCTAAGCAGGCAGAAAAAGATGCCAAACGAAAGGCAAGAGCGAAGGAATTGAAGAAATTAAAGAAAGAAAAGGCCAAGAAAGCACAGGCGGAAGCTGCTGAATCTCAAAAAGCTGCGAAGGCGGAACAGAGCAGAGGAATCGGCTCTATTTTGAATTCCCGAGCTGAATCAACCAGTGGAAAACTGATTACCAAAGAGATGGCACAGGTAGCTGAACGGGAAAAGAGAGCAGCAGCTGCTGAGAGGAGAATTGCAGCCATGGTCGCAGCTGCAGCCACCAGTGGTTCCTCGCCAACTACTCCGAACAGCTCACAGACTAAACCCGGGTTAGCGGGGGATGCCAACTGTTCCTGTTGCGGTACGTCGCTGGCTGGTAAAGTTCCTTTCCACCGGTACAACTTCAAATATTGTAGCTCAACGTGTATGCATGTACACAGAGAGGTCCTTGAGGAAAACTAG 2016 45.04 METNPAAAVVSNTPSIPPEKRNRSIFNVPPDFFDSCKLLRSPYSHTSSTSGSYRDSSSAEAVDSEQNSRDFKESSVAHRWTCNTCKAEFESLLDQRSHFKSDLHRFNVKLSIAGKNIVKEDDFDELTSDSFRDYDVSSISGSEDETEKEIYSRNEASKGTSDNMNKKRLFVHLQTGERVSVWKCLLINESDSISYEDDKTSVSGNGVHAQYLRENEVIARLKYLNHEPRDGTHLRIVLLASGGHFAGCVFDGNLVVAHKTFHRYVVRAKSGKKQSSKDASGKTINSAGASLRRHNELALKKEIQDLLAGWKSYFNATSCVYIYAPSNNRQLLFNGDKPYFSDQHSSVRNIPLTVRRPTLKEARRVYEQLVQVVYEVDEKEILTTSEHDSPLSAVTTDNGTQDTSGKKVIGDLEKDACTHLEESIERRITSESESEVICRTTPLHEASESGNADKVLELLEQGLDPCIKDERGRTPYMLASEKEVRNNFRRFMASNLDKWDWNSAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQAEAAESQKAAKAEQSRGIGSILNSRAESTSGKLITKEMAQVAEREKRAAAAERRIAAMVAAAATSGSSPTTPNSSQTKPGLAGDANCSCCGTSLAGKVPFHRYNFKYCSSTCMHVHREVLEEN 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2728996 2734276 + Tan0021008.1 Tan10g0332 765126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0332 671 Gene3D - 412 505 IPR036770 -
Tan10g0332 671 Pfam Bacteroidetes VLRF1 release factor 236 372 IPR041175 -
Tan10g0332 671 MobiDBLite consensus disorder prediction 138 155 - -
Tan10g0332 671 ProSiteProfiles Ankyrin repeat region circular profile. 438 470 - -
Tan10g0332 671 MobiDBLite consensus disorder prediction 44 64 - -
Tan10g0332 671 MobiDBLite consensus disorder prediction 510 572 - -
Tan10g0332 671 Pfam Vms1-associating treble clef domain 634 667 IPR041540 -
Tan10g0332 671 MobiDBLite consensus disorder prediction 1 20 - -
Tan10g0332 671 MobiDBLite consensus disorder prediction 137 160 - -
Tan10g0332 671 ProSitePatterns Zinc finger C2H2 type domain signature. 82 104 IPR013087 -
Tan10g0332 671 ProSiteProfiles Ankyrin repeat profile. 438 470 IPR002110 GO:0005515(InterPro)
Tan10g0332 671 MobiDBLite consensus disorder prediction 44 70 - -
Tan10g0332 671 Coils Coil 514 564 - -
Tan10g0332 671 Coils Coil 582 602 - -
Tan10g0332 671 MobiDBLite consensus disorder prediction 1 23 - -
Tan10g0332 671 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 19 670 IPR047139 GO:0030433(PANTHER)
Tan10g0332 671 MobiDBLite consensus disorder prediction 517 531 - -
Tan10g0332 671 SUPERFAMILY Ankyrin repeat 440 492 IPR036770 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0332 K26089 - csv:101216211 1003.43