Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g0332 | ATGGAGACCAATCCCGCTGCCGCGGTCGTTAGCAATACCCCAAGCATTCCGCCGGAGAAACGGAACCGTTCCATCTTCAACGTCCCGCCGGACTTCTTCGATTCTTGCAAACTCCTTCGTTCTCCATATTCACACACCTCATCAACCAGCGGCAGCTACAGGGACAGCTCAAGCGCAGAAGCAGTTGATTCGGAGCAGAACTCTAGGGATTTCAAAGAAAGCTCCGTCGCCCACAGATGGACCTGCAACACATGCAAGGCCGAGTTCGAATCCCTCCTCGACCAGCGTTCGCACTTCAAATCCGACCTTCACCGGTTCAATGTGAAACTGAGCATTGCTGGAAAGAATATTGTGAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTATGACGTGTCAAGTATTTCTGGATCAGAGGATGAAACAGAGAAGGAGATTTACTCTCGGAATGAAGCGTCTAAGGGAACAAGTGATAATATGAACAAGAAGAGGTTGTTTGTTCATCTTCAAACAGGTGAAAGAGTTTCGGTTTGGAAGTGTTTGCTCATAAATGAGTCAGATAGTATTTCGTATGAGGATGACAAAACATCAGTCAGTGGTAATGGTGTTCATGCACAGTACCTTAGAGAGAATGAAGTCATAGCAAGATTAAAATATTTAAATCACGAGCCAAGAGATGGCACCCATTTGCGGATAGTGTTGCTTGCAAGTGGTGGTCACTTTGCTGGTTGTGTTTTTGATGGGAACTTGGTTGTAGCTCATAAAACCTTTCACAGATATGTGGTGAGAGCCAAGTCTGGAAAGAAGCAGTCATCAAAAGATGCAAGTGGCAAGACAATCAATTCTGCTGGCGCTTCACTTCGTCGTCATAATGAACTGGCGTTGAAGAAGGAAATTCAAGATCTCCTTGCTGGTTGGAAGTCCTATTTTAATGCTACATCTTGCGTTTATATTTATGCTCCTTCAAACAATCGGCAATTGCTTTTTAATGGGGATAAGCCGTATTTTAGTGATCAGCACTCTTCTGTTCGGAATATTCCTTTGACTGTTAGAAGGCCTACATTGAAAGAAGCCCGGCGTGTTTATGAACAATTGGTGCAAGTAGTGTATGAAGTAGACGAGAAGGAAATATTGACCACCAGTGAGCACGATTCACCGTTAAGTGCAGTAACAACAGACAATGGCACCCAAGATACAAGTGGAAAAAAAGTCATTGGAGACTTGGAAAAAGATGCCTGTACACATCTTGAAGAATCTATTGAACGCCGCATAACTAGTGAGAGTGAAAGTGAAGTTATTTGTAGAACTACACCTTTGCATGAAGCATCAGAGTCTGGAAATGCAGATAAAGTTTTGGAACTCCTTGAACAGGGTCTTGATCCCTGCATCAAAGACGAAAGAGGGCGTACTCCTTACATGCTAGCAAGTGAGAAGGAAGTCCGGAATAACTTTAGAAGGTTCATGGCTTCAAACCTTGATAAGTGGGATTGGAATTCTGCTAAGGTGCCCAGTGCATTAACCAAGGAAATGGAGGAATCTCAAGCTGCTAAGCAGGCAGAAAAAGATGCCAAACGAAAGGCAAGAGCGAAGGAATTGAAGAAATTAAAGAAAGAAAAGGCCAAGAAAGCACAGGCGGAAGCTGCTGAATCTCAAAAAGCTGCGAAGGCGGAACAGAGCAGAGGAATCGGCTCTATTTTGAATTCCCGAGCTGAATCAACCAGTGGAAAACTGATTACCAAAGAGATGGCACAGGTAGCTGAACGGGAAAAGAGAGCAGCAGCTGCTGAGAGGAGAATTGCAGCCATGGTCGCAGCTGCAGCCACCAGTGGTTCCTCGCCAACTACTCCGAACAGCTCACAGACTAAACCCGGGTTAGCGGGGGATGCCAACTGTTCCTGTTGCGGTACGTCGCTGGCTGGTAAAGTTCCTTTCCACCGGTACAACTTCAAATATTGTAGCTCAACGTGTATGCATGTACACAGAGAGGTCCTTGAGGAAAACTAG | 2016 | 45.04 | METNPAAAVVSNTPSIPPEKRNRSIFNVPPDFFDSCKLLRSPYSHTSSTSGSYRDSSSAEAVDSEQNSRDFKESSVAHRWTCNTCKAEFESLLDQRSHFKSDLHRFNVKLSIAGKNIVKEDDFDELTSDSFRDYDVSSISGSEDETEKEIYSRNEASKGTSDNMNKKRLFVHLQTGERVSVWKCLLINESDSISYEDDKTSVSGNGVHAQYLRENEVIARLKYLNHEPRDGTHLRIVLLASGGHFAGCVFDGNLVVAHKTFHRYVVRAKSGKKQSSKDASGKTINSAGASLRRHNELALKKEIQDLLAGWKSYFNATSCVYIYAPSNNRQLLFNGDKPYFSDQHSSVRNIPLTVRRPTLKEARRVYEQLVQVVYEVDEKEILTTSEHDSPLSAVTTDNGTQDTSGKKVIGDLEKDACTHLEESIERRITSESESEVICRTTPLHEASESGNADKVLELLEQGLDPCIKDERGRTPYMLASEKEVRNNFRRFMASNLDKWDWNSAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQAEAAESQKAAKAEQSRGIGSILNSRAESTSGKLITKEMAQVAEREKRAAAAERRIAAMVAAAATSGSSPTTPNSSQTKPGLAGDANCSCCGTSLAGKVPFHRYNFKYCSSTCMHVHREVLEEN | 671 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2728996 | 2734276 | + | Tan0021008.1 | Tan10g0332 | 765126 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g0332 | 671 | Gene3D | - | 412 | 505 | IPR036770 | - | |
Tan10g0332 | 671 | Pfam | Bacteroidetes VLRF1 release factor | 236 | 372 | IPR041175 | - | |
Tan10g0332 | 671 | MobiDBLite | consensus disorder prediction | 138 | 155 | - | - | |
Tan10g0332 | 671 | ProSiteProfiles | Ankyrin repeat region circular profile. | 438 | 470 | - | - | |
Tan10g0332 | 671 | MobiDBLite | consensus disorder prediction | 44 | 64 | - | - | |
Tan10g0332 | 671 | MobiDBLite | consensus disorder prediction | 510 | 572 | - | - | |
Tan10g0332 | 671 | Pfam | Vms1-associating treble clef domain | 634 | 667 | IPR041540 | - | |
Tan10g0332 | 671 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Tan10g0332 | 671 | MobiDBLite | consensus disorder prediction | 137 | 160 | - | - | |
Tan10g0332 | 671 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 82 | 104 | IPR013087 | - | |
Tan10g0332 | 671 | ProSiteProfiles | Ankyrin repeat profile. | 438 | 470 | IPR002110 | GO:0005515(InterPro) | |
Tan10g0332 | 671 | MobiDBLite | consensus disorder prediction | 44 | 70 | - | - | |
Tan10g0332 | 671 | Coils | Coil | 514 | 564 | - | - | |
Tan10g0332 | 671 | Coils | Coil | 582 | 602 | - | - | |
Tan10g0332 | 671 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Tan10g0332 | 671 | PANTHER | ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 19 | 670 | IPR047139 | GO:0030433(PANTHER) | |
Tan10g0332 | 671 | MobiDBLite | consensus disorder prediction | 517 | 531 | - | - | |
Tan10g0332 | 671 | SUPERFAMILY | Ankyrin repeat | 440 | 492 | IPR036770 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g0332 | K26089 | - | csv:101216211 | 1003.43 |