Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0356 ATGGACTTCGAAGCTCAGGCTCAGAAGAGCTCCGACGATTCATCGTCGTCCTCGAAGCTGGTTCTTTATTCTTTCTGGCAGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGCTGAACCTCAAAGGGCTTTCTTACGAGTACAGAGCAGTGAACCTTGGAAGGGGAGAACAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTTAAGTATGTTCCCGTATTAGTAGATGGTCCGGTGGTAGTTTCAGACTCTTACGCGATTTTGCTGTATTTGGAAGAGAAATATCCACAGAAGGCGCTGCTGCCTGCTGATCTTCATTTAAAATCTCTTAATCTACAAGTGGCAAGTATCGTCAGCTCAAGCATACAACCTCTTCTTATGTTGGGATTGCTGAAAACTATCGAGGAAAAATTTGGTCCAGAAGAGCAACTACCATGGACTCAGACTAATATAGAAAAAGGTTTCAATGCTCTTGAGAAACTGTTGAAGGATTTTTCTGGCCGATATGCCTTGGGAGATGAAATATATATGGCTGATGTATTTTTGGCCCCCCAGATTTCAATTGCTTTTGGGAGGTTCAACATTGACACGTCCAAGTTTCCGACTTTAGCGAGGATTTATGAATCTTACAAGACGTTACCAGAATTCCAAGCCTCGTCACCAGAAAGACAGCCCGACGCCCTTCGTTAA 690 44.35 MDFEAQAQKSSDDSSSSSKLVLYSFWQSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLSPDFERLNPLKYVPVLVDGPVVVSDSYAILLYLEEKYPQKALLPADLHLKSLNLQVASIVSSSIQPLLMLGLLKTIEEKFGPEEQLPWTQTNIEKGFNALEKLLKDFSGRYALGDEIYMADVFLAPQISIAFGRFNIDTSKFPTLARIYESYKTLPEFQASSPERQPDALR 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2895871 2900771 + Tan0016933.1 Tan10g0356 765150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0356 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 104 229 IPR010987 -
Tan10g0356 229 NCBIfam maleylacetoacetate isomerase 22 227 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Tan10g0356 229 Pfam Glutathione S-transferase, C-terminal domain 149 205 - -
Tan10g0356 229 Gene3D - 101 229 - -
Tan10g0356 229 CDD GST_C_Zeta 105 224 IPR034330 -
Tan10g0356 229 SUPERFAMILY Thioredoxin-like 16 102 IPR036249 -
Tan10g0356 229 SFLD Main (cytGST) 20 210 - -
Tan10g0356 229 Gene3D Glutaredoxin 22 98 - -
Tan10g0356 229 PANTHER MALEYLACETOACETATE ISOMERASE 18 227 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Tan10g0356 229 Pfam Glutathione S-transferase, N-terminal domain 22 98 IPR004045 -
Tan10g0356 229 FunFam Glutathione S-transferase Z1 18 102 - -
Tan10g0356 229 FunFam Maleylacetoacetate isomerase 103 229 - -
Tan10g0356 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 18 99 IPR004045 -
Tan10g0356 229 SFLD Glutathione Transferase (cytosolic) 20 210 IPR040079 -
Tan10g0356 229 SUPERFAMILY GST C-terminal domain-like 100 226 IPR036282 -
Tan10g0356 229 CDD GST_N_Zeta 20 92 IPR034333 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0050 Tan-Chr5:560484 Tan10g0356 Tan-Chr10:2895871 2.20E-53 dispersed
Tan05g0051 Tan-Chr5:560484 Tan10g0356 Tan-Chr10:2895871 6.60E-56 dispersed
Tan10g0356 Tan-Chr10:2895871 Tan10g0599 Tan-Chr10:4865211 4.00E-10 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0356 K01800 - csv:101213403 365.54