Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0406 ATGCTCTCTTCCCACATCACTCCTTCTAAAACCCCACTCTCCACCAACCCCACTTCCCCTTTTCCTCTCTTCTACCCAAATCTCCTCCCATCCGTCCGATCAAAATCCCTCAATCGTCCCAAATTCGCCACCTTCGCCGCCATTAATGGCGTCCCTTCAAAACCCACGTCTCAGATTCTCAATCCAATCCCCAAATCGAACCGATTCTGCAAATTTCCTGTGAACCCATTTAGGGGTTTTCCGTCTAAACCTAACCCCCATGTCCCCGCCGCTGTCGCTGCAGACGACGGCGATACCACCGCCGATTCCGCCTCCAATGGCAAAACCTTTCAGCTCGCCGTCGTGTTTGGGCTCTGGTATTTTCAGAACATCGTCTTCAATATCTACAACAAGAAGGTTCTCAACATTTTCCCATTTCCATGGCTTCTCGCTTCGTTTCAGCTCTTCGCTGGATCGATTTGGATGCTCGTTCTTTGGTCGTTGAAGCTTCAGCCATGCCCTAAAATTTCAAAGCCCTTCATAATCGCTCTCCTCGGCCCCGCTTTGTTCCACACAATCGGCCATATCTCCGCCTGCGTTTCGTTCTCGAAAGTCGCTGTTTCCTTCACCCATGTCATTAAATCGGCTGAACCAGTCTTCTCGGTTCTGTTCTCCTCCTTCCTCGGCGATTCGTATCCAATCCAGGTCTGGCTCTCGATTCTCCCCATTGTTTTTGGCTGCTCTCTGGCCGCCATTACTGAAGCTTCCTTCAATTTCGAAGGTCTTTCAGGCGCCATGATCAGCAATGTAGGATTTGTGCTGAGAAATATTTACTCAAAAAGAAGCTTGCAGAGCTTCAAGGAGGTCAATGGGTTGAATTTATATGGTTGGATTAGTATAATCTCTTTGTTGTATCTGTTTCCTGTGGCCATTTTCGTTGAAGGGTCCAAATGGGTTCAAGGATATCATCAAGCAATTGCCTCCATTGGAAATGCTTCAACATTATATATCTGGGTTTTGATTTCTGGGATCTTTTATCATCTTTATAATCAATCTTCTTACCAAGCTTTGGATGAAATCAGTCCTTTGACATTCTCTGTTGGGAATACGATGAAAAGAGTGGTCGTGATTGTTTCTTCTGTGTTGGTTTTTAGAAATCCAATTAGGCCTTTGAATGCTGTTGGTTCTGCCATTGCCATTTTTGGGACTTTTCTGTATTCTCAAACGACGACTAAAAAGAGTGATAAGAAGATTGAGGAAGGAGAAAAGAAGGATTGA 1257 45.43 MLSSHITPSKTPLSTNPTSPFPLFYPNLLPSVRSKSLNRPKFATFAAINGVPSKPTSQILNPIPKSNRFCKFPVNPFRGFPSKPNPHVPAAVAADDGDTTADSASNGKTFQLAVVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFAGSIWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVLFSSFLGDSYPIQVWLSILPIVFGCSLAAITEASFNFEGLSGAMISNVGFVLRNIYSKRSLQSFKEVNGLNLYGWISIISLLYLFPVAIFVEGSKWVQGYHQAIASIGNASTLYIWVLISGIFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPIRPLNAVGSAIAIFGTFLYSQTTTKKSDKKIEEGEKKD 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3269368 3271086 - Tan0003043.1 Tan10g0406 765200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0406 418 Pfam Triose-phosphate Transporter family 111 400 IPR004853 -
Tan10g0406 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 401 - -
Tan10g0406 418 PANTHER SOLUTE CARRIER FAMILY 35 108 402 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Tan10g0406 418 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 111 410 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2333 Tan-Chr3:77306985 Tan10g0406 Tan-Chr10:3269368 8.90E-87 dispersed
Tan04g1011 Tan-Chr4:9011679 Tan10g0406 Tan-Chr10:3269368 1.30E-59 dispersed
Tan04g1012 Tan-Chr4:9011679 Tan10g0406 Tan-Chr10:3269368 4.60E-59 dispersed
Tan10g0406 Tan-Chr10:3269368 Tan05g2003 Tan-Chr5:69968059 7.90E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0406 K15283 - csv:101219051 711.064