Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0407 ATGGAAGAAGAACTGAAGCTATTCAGAACGTGGTCGAGTCCGTTCGCTCTGAGAATTGTATGGGCGTTGAAGTTGAAAGGATTAGAATACGACACCGTTTACGAAGATCTGACGAACAAGAGTTCGTTGCTTTTGGAGTACAATCCGATCCACAAGAAGGTTCCGGTGCTCGTCCATGGCGGAAAACCGATCGCCGAATCGCTCGTCATTCTCGAATATATCGATGAAGTATGGAACCAAAATCCATTGCTGCCTCCAGATCCTTATCAGAGAGCCCTTGCTCGCTTTTGGGCCAAATTTGGGGATGAGAAGGTTTTTGAATCAATAAAGAAAGTGTTTATGAACAAGGGGAAAGTGAAAGAGGAAGGCATAGAAGAAGCCTTGGAGAATTTGAAGCATTTGGAAGAAGAATTAAAGGGAAAGAGGTTCTTTGGAGGGGAGGCCATTGGATTTGTGGATATTGCACTTGGTTGGCTTGCAAACTTAATAAGTGTATTGGAGGAAGTGATTGGACTTAAACTGATAACTGAAGAAAGCTTTCCCCTCTTATCCAAATGGATTGAGGAATTTGCTGCTGCTCCAATCATCAATCAAAATTGGCCTTCTAGGGACCAACTTGTCACCAAGTTTCAAGCAATGCATCAAACTTTTATGAGTAAACTACCATAA 669 42.45 MEEELKLFRTWSSPFALRIVWALKLKGLEYDTVYEDLTNKSSLLLEYNPIHKKVPVLVHGGKPIAESLVILEYIDEVWNQNPLLPPDPYQRALARFWAKFGDEKVFESIKKVFMNKGKVKEEGIEEALENLKHLEEELKGKRFFGGEAIGFVDIALGWLANLISVLEEVIGLKLITEESFPLLSKWIEEFAAAPIINQNWPSRDQLVTKFQAMHQTFMSKLP 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3273542 3276419 - Tan0009751.1 Tan10g0407 765201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0407 222 Coils Coil 117 141 - -
Tan10g0407 222 Pfam Glutathione S-transferase, C-terminal domain 109 194 IPR004046 -
Tan10g0407 222 Gene3D Glutaredoxin 1 83 - -
Tan10g0407 222 CDD GST_C_Tau 88 213 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Tan10g0407 222 FunFam Tau class glutathione S-transferase 84 220 - -
Tan10g0407 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 211 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Tan10g0407 222 SUPERFAMILY GST C-terminal domain-like 76 217 IPR036282 -
Tan10g0407 222 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Tan10g0407 222 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Tan10g0407 222 Gene3D - 84 220 - -
Tan10g0407 222 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Tan10g0407 222 SFLD Glutathione Transferase (cytosolic) 2 220 IPR040079 -
Tan10g0407 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Tan10g0407 222 CDD GST_N_Tau 5 78 - -
Tan10g0407 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 210 IPR010987 -
Tan10g0407 222 FunFam Tau class glutathione S-transferase 1 86 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0878 Tan-Chr3:64978901 Tan10g0407 Tan-Chr10:3273542 7.60E-59 dispersed
Tan03g0879 Tan-Chr3:64986299 Tan10g0407 Tan-Chr10:3273542 7.20E-53 dispersed
Tan04g1084 Tan-Chr4:9721737 Tan10g0407 Tan-Chr10:3273542 3.20E-44 dispersed
Tan04g1142 Tan-Chr4:10624661 Tan10g0407 Tan-Chr10:3273542 6.60E-45 dispersed
Tan04g1143 Tan-Chr4:10637086 Tan10g0407 Tan-Chr10:3273542 9.40E-44 dispersed
Tan05g3321 Tan-Chr5:85078506 Tan10g0407 Tan-Chr10:3273542 9.50E-36 dispersed
Tan09g1846 Tan-Chr9:69807788 Tan10g0407 Tan-Chr10:3273542 5.10E-58 dispersed
Tan10g0407 Tan-Chr10:3273542 Tan10g0599 Tan-Chr10:4865211 4.80E-53 dispersed
Tan10g0407 Tan-Chr10:3273542 Tan10g0409 Tan-Chr10:3282856 2.10E-85 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0407 K00799 - csv:101219529 383.645