Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0506 ATGGGGAAAGCCGACAACATCCTCCAAACTCTCGGAGACTTTACCAGCAAAGAGAATTGGGACAATTTCTTCACCATCCGCGGCCATGGCGATGCTTTCGAGTGGTATTCCGAGTGGCCTGAGCTCAAAGACCCACTCATTTCGCACCTTCCCACCCTCTCCCAATCCCCATCTCCTCAGATTCTCGTTCCTGGTTGCGGAAATTCCAGTCTCTCTGAGCAGCTATACGACGCCGGCTTTCGATGCATCACCAACATTGATTTCTCTAAAGTTGCAATTTCCGATATGCTGCGCCGGAACGTGAGGGAACGCCCCGATATGCGGTGGCGCGTCATGGATATGACGAACATGCAGTTCACAAACGATACATTTGATGCTGTTGTTGATAAAGGTGGGTTGGATGCTTTAATGGAGCCAGAAGTTGGTTCTAAGCTGGGAAGTCAATACTTATCTGAGGTGAAAAGAGTTCTAAAACCAGGAGGAAAGTTTATCTGTCTTACCTTAGCAGAATCTCATGTTATAGGCTTGCTCTTTCCCAAGTTCCGTTTTGGATGGAAAATGAGTATTCATGTCATACCTCAAAAACCACCGAGTAAGCCTAATTTTCAAACCTTTATGGTGGTGGTGGAGAAAGATGAATCTACTACATGGCACCAGATAGAATCTTCTTTAAATTTTTCTTTGCTTGATTCCCGTGGAAATCAGACTCGTGAACTTGTCCAAACTCTTGAGAATGAGAATATAATTCGCCAAAAGTATTCCACTGGTGCTGATCTGTTGTTCTCTCTTGAAGACCTGCAACTAGGAGCAAAGGGAGATCTGCACAAGCTTCACCAGGGCCGTCGGGTTCAATTTACTTTAGGTGGACAAGGGACCTCCATTTTCAGTTACAGAGCTGTACTTCTTGATGCTCGGGAACAGTCTGGCCCATTCTTGTATGAATGTGGAGTTTTTATAGTGCCTAAGACTCGAGCTCATGAATGGCTGTTCTCTTCAGAAGAAGGCCAGTGGATGGTCGTTGAAAGCTCAAAAGCAGCTCGCCTTATAATGATTCTATTAGATGAGACACAATCTGGTGCCAACATGGATGCTATTCAGAAAGATTTATCTCCCCTAGTTAAACAATTGGCACCTGGAGAAGATGACAGTGGATCTCAAATTCCATTTATGATGGCAAGTGATGGGATCAAGGAACGGAATTGTGTTTTCCAGGGTACATCTTCATTAACTGGTTCAATAGTTGTTGAAGATGTAATATATGAAAATGTAAGTGGAGATGTCAGCCGCATCTTTCCATCTGGAGATTTGATATTCCGTCGCCTTATTTTCCAAAGAACAGAGAGTTTGGTGCAGTCTGAAGCTTTGTTGACAAGGGAAAGACTTCAGGAGAAAATTTCTGGTCAGATGGACAGGAAAAAGTCTGATTCATCATCCAAATCAAAAAATAAAGGAAAGAAGAGGATGAATAAGGAGTCTAGTGACCAAATGAAGGTTTATCATGGCTATCTGGCAAGTTCTTATCATTCGGGGATCATTTCTGGGTTTATGTTGATATCTCGATATTTGGAAAGTGTGAACACAGTTGTCATCGGTCTTGGAGCAGGTTTACTGCCCATGTTCCTCCGTGCATGCATGTGTTTTTTACACATTGAGGTGGTTGAGTTGGATTCAACTATCCTCAATCTTGCAAGGGATTACTTTGATTTTGCTGAGGATGCCGATTTGATGGTTCATATTGCCGATGGGATTCAGTTTGTTAGAGAATTCAGAAATTCTGGGGCAAATGATTCATCAACTGTTGCTCTTGACAATGGAAACTCTTCTCAAGTAAAACAGCAAGGAAACAAGAAGGTCGACATACTTATTATTGACGTTGATGCAACAGACTCAAGCTCTGGAATGACCTGCCCAGCGGCTGATTTTGTAGAAGAGCCATTTCTTCTGGCAGTGAAAGATGCCCTCTCCGAGCAGGGTCTTTTTATTGTAAACTTGGTCACACGATCTCCAACCGTTAACGATATGGTTGTCTCGAGGATGAAAGGAGTCTTTAACCACCTCTTTTCCCTTCAACTTGAGGAAGATGTGAATGAAGTGCTTTTTGCTCTTCCTTCAGAGTTTTGTACAGAGGAACATCTCTTCAATGAAGCAGCTCTTCAACTTGAGAAACTTTTAAATCTGAAACACCCAGAAATGAGGCAGAGCATAGTTGATGCTACAAAGAAAATCAGATGTTTGAAGTAG 2241 42.79 MGKADNILQTLGDFTSKENWDNFFTIRGHGDAFEWYSEWPELKDPLISHLPTLSQSPSPQILVPGCGNSSLSEQLYDAGFRCITNIDFSKVAISDMLRRNVRERPDMRWRVMDMTNMQFTNDTFDAVVDKGGLDALMEPEVGSKLGSQYLSEVKRVLKPGGKFICLTLAESHVIGLLFPKFRFGWKMSIHVIPQKPPSKPNFQTFMVVVEKDESTTWHQIESSLNFSLLDSRGNQTRELVQTLENENIIRQKYSTGADLLFSLEDLQLGAKGDLHKLHQGRRVQFTLGGQGTSIFSYRAVLLDAREQSGPFLYECGVFIVPKTRAHEWLFSSEEGQWMVVESSKAARLIMILLDETQSGANMDAIQKDLSPLVKQLAPGEDDSGSQIPFMMASDGIKERNCVFQGTSSLTGSIVVEDVIYENVSGDVSRIFPSGDLIFRRLIFQRTESLVQSEALLTRERLQEKISGQMDRKKSDSSSKSKNKGKKRMNKESSDQMKVYHGYLASSYHSGIISGFMLISRYLESVNTVVIGLGAGLLPMFLRACMCFLHIEVVELDSTILNLARDYFDFAEDADLMVHIADGIQFVREFRNSGANDSSTVALDNGNSSQVKQQGNKKVDILIIDVDATDSSSGMTCPAADFVEEPFLLAVKDALSEQGLFIVNLVTRSPTVNDMVVSRMKGVFNHLFSLQLEEDVNEVLFALPSEFCTEEHLFNEAALQLEKLLNLKHPEMRQSIVDATKKIRCLK 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4075720 4083619 - Tan0014836.1 Tan10g0506 765300

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0506 746 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 169 IPR029063 -
Tan10g0506 746 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 526 710 IPR029063 -
Tan10g0506 746 CDD AdoMet_MTases 61 165 - -
Tan10g0506 746 Pfam Methyltransferase domain 64 165 IPR013216 GO:0008757(InterPro)
Tan10g0506 746 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 485 726 - -
Tan10g0506 746 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 474 666 IPR051419 -
Tan10g0506 746 Gene3D Vaccinia Virus protein VP39 481 739 IPR029063 -
Tan10g0506 746 Gene3D Vaccinia Virus protein VP39 12 227 IPR029063 -
Tan10g0506 746 FunFam Methyltransferase-like protein 13 12 223 - -
Tan10g0506 746 MobiDBLite consensus disorder prediction 465 492 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0506 K25166 - - csv:101211869 1338.17
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2269 Tan-Chr6:73676986 Tan10g0506 Tan-Chr10:4075720 3.80E-109 transposed
Tan10g0506 Tan-Chr10:4075720 Tan06g2268 Tan-Chr6:73656349 2.20E-70 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g950 . . Bda03g01134 . Bpe04g01077 . . . . . . . . . Sed02g1516 Cpe08g00405 . Bhi01g00216 Tan10g0506 Cmetu06g0645 Lac12g2024 Hepe05g1769 . Lcy11g1784 . . . . . . . . Cone15ag0259 . . Lsi05g01851 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 2 32