Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0517 ATGGCTTGTGAAGCTATACAAATCTGGACATTTAATGGATTAGTGGCTGCATTTCTTGATCTTGGTATAGCTTATCTTTTATTATGTGCATCAAGTCTTGTTTTCTTTACCTCCAAATTTCTTGCACTGTTTGGATTATGTCTGCCCTGCCCTTGTGACGGGCTATTTGGGAACCTTAGTAGTGATCACTGCTTCCAAAAGTTACTAGTGGATCGTTCATCCAAAAAAATATCTTCAGTCCTACACTCGGCTGGAGAAAAGTTCCCATTGAATTCCATGTGGGATCAAGAGCCAAAATGTTTTTTTAATTCAACGTTGGTGCACGAGAGGAATGGCAAGGAGGCACATGTTGAATTGGAAGGTGAAGAATCAGGTAGCTCCTTTTTTAAAACCAGATCATCACAAGGTATGATTTATGGAGACTTTCACAGTGTAAAAGAATCGCGTTGTAAAGGCAGTGTGAGTGATGGGAAGGTCTTATCGATGTCTCTGGAAGACCTTTCTCAGTCTCCTTCAAGCTTCAGTGGATTTGGGGATAATAATACCGAGGACGGCTTCTTTTCTGTTGATTCAAGAGATGGAAGAGAGGAGGCTTCATCAGACAACAGCGATCAATATAATGTATTTCCTGATGTCGAAGTAAATGAATCTCATGATGAGAAAATATGGGCTGAGAAGTATGAAGCATCTTTTGAAGAGGCAGGGAACAACTGCAGAGGGGAGTTAAGCTTTGATGGTAATGAGAGTGATACAATCAAACTATTGGAACGAGCACTTGAAGAAGAGCAAACGGTTCGTGCTACCCTGTACCTGGAACTTGAGAAAGAGAGAAGTGCTGCTGCCACTGCTGCTGATGAGGCCATGGCTATGATATTACGTCTTCAGGAGGAGAAGGCATCAATAGAAATGGATGCTAGGCAATATCAGAGGATGATAGAGGAGAAAACTGCTTATGATGCTGAGGAAATGAGTATTCTTAAAGAAATTCTAGTGAGGAGAGAGCGGGAAATGCATTTCCTGGAGAAGGAAGTTGAAGCATTTCAGAAAAGTTTCTTTGAAGATGATGGATTGGATGTTGATATGCTCGACTCAGAAGTTACACCCCAAAGAGCCCCTTCTTTCCCATATTCAACTAAACATCCATCTCATATGCTTCGATGCATGAATAGATCCATTAGAGACAAGCAGGATGCAAATTACACAAAACATTCTTCACAATATGAGAACCCATCAATGGAGTCACAAAAGTTAACTTTTGAATTTGGTGAAGAGTCACCATTTATTCAAGTGGATGAACTTGCTGATGCTGCAAAAGCTGGGGGCATGTTGTTGCACCAAGTTGCTGATAACTTCAAGTGTAATATAGAGATTGACAATGAGTTACAAGAAAAGGGCATGGTAGAAGATGAGAATTTATACATTGTACAAGGAGAAGTAAATGAACTGGAGCCATATTTGAAAAGCAACGAGTCAAATGATCTAGGTAAGGTTGAGACATCCACGGAATCGATTGCAGATGAACAAGAAAAAGTCGATGAAGTTTCATATGATGGGTTGGCATCGGCTAAGACAATTCTTCCCTGTGACGAGTACAATTTGGAAAAGAATGGTGACCATCAAAAGCAGCAGCAAAGAGATCTTGACTCTGCGACTGGTATAGTTCCCCATCCTCATGATATTCATGTCATTGATGATGAAGTGAGTGTTGATGCAAGTAAAGAATCGGTGGTCAAGGGTACCTGGAGTATTCCAGCAAAATGTGATAGCGCATCCTTCAGCTTGTTGCAGAGTGAACTAGACATCACAAGAAGCAGCTCAGATGCCACTGGTAGATTTCCACCAATGGCTCGTTCTCAAAGCAATTGCTTGCGTTCTGAATTGCGTAGAAATTCAATGTCTGCTGTCGACTATGAAAGGTCGAAAATTGGCAATGAAGTCGAGTGGCTCAGAGAAAGGTTGAAGATTATTCAGGAGGGAAGAGAGAAACTCAAGTTCCCTGTGGAACACAAAGAGAAGGAGAACAATCAGTTGCAACTTTTAGAAAATATAACAAATCACCTTCGTGAAATCCGACAATTGACAGATCCTGGAAAGGCAACTCTTCAGGCTCCATTGCCTCCATCCTCTAAGGCTATGTCAAAGAAACGATGCTGGCGAAGTTCATCTTTAAGCATTCATAGAAGCAGCTAG 2190 41.23 MACEAIQIWTFNGLVAAFLDLGIAYLLLCASSLVFFTSKFLALFGLCLPCPCDGLFGNLSSDHCFQKLLVDRSSKKISSVLHSAGEKFPLNSMWDQEPKCFFNSTLVHERNGKEAHVELEGEESGSSFFKTRSSQGMIYGDFHSVKESRCKGSVSDGKVLSMSLEDLSQSPSSFSGFGDNNTEDGFFSVDSRDGREEASSDNSDQYNVFPDVEVNESHDEKIWAEKYEASFEEAGNNCRGELSFDGNESDTIKLLERALEEEQTVRATLYLELEKERSAAATAADEAMAMILRLQEEKASIEMDARQYQRMIEEKTAYDAEEMSILKEILVRREREMHFLEKEVEAFQKSFFEDDGLDVDMLDSEVTPQRAPSFPYSTKHPSHMLRCMNRSIRDKQDANYTKHSSQYENPSMESQKLTFEFGEESPFIQVDELADAAKAGGMLLHQVADNFKCNIEIDNELQEKGMVEDENLYIVQGEVNELEPYLKSNESNDLGKVETSTESIADEQEKVDEVSYDGLASAKTILPCDEYNLEKNGDHQKQQQRDLDSATGIVPHPHDIHVIDDEVSVDASKESVVKGTWSIPAKCDSASFSLLQSELDITRSSSDATGRFPPMARSQSNCLRSELRRNSMSAVDYERSKIGNEVEWLRERLKIIQEGREKLKFPVEHKEKENNQLQLLENITNHLREIRQLTDPGKATLQAPLPPSSKAMSKKRCWRSSSLSIHRSS 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4141748 4146072 - Tan0014841.1 Tan10g0517 765311

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0517 729 MobiDBLite consensus disorder prediction 185 207 - -
Tan10g0517 729 MobiDBLite consensus disorder prediction 186 200 - -
Tan10g0517 729 Coils Coil 284 311 - -
Tan10g0517 729 Coils Coil 330 350 - -
Tan10g0517 729 ProSiteProfiles GTD-binding domain profile. 250 348 IPR007656 -
Tan10g0517 729 PANTHER BNAANNG28530D PROTEIN 240 713 - -
Tan10g0517 729 Pfam Zein-binding 255 344 IPR007656 -
Tan10g0517 729 MobiDBLite consensus disorder prediction 695 729 - -
Tan10g0517 729 MobiDBLite consensus disorder prediction 714 729 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0517 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0552 Tan-Chr1:5203169 Tan10g0517 Tan-Chr10:4141748 5.10E-11 dispersed
Tan06g1294 Tan-Chr6:14921386 Tan10g0517 Tan-Chr10:4141748 7.00E-52 dispersed
Tan06g1295 Tan-Chr6:14921386 Tan10g0517 Tan-Chr10:4141748 7.00E-52 dispersed
Tan09g1584 Tan-Chr9:67642169 Tan10g0517 Tan-Chr10:4141748 3.40E-15 dispersed
Tan09g1585 Tan-Chr9:67642169 Tan10g0517 Tan-Chr10:4141748 3.50E-15 dispersed
Tan10g0517 Tan-Chr10:4141748 Tan11g1753 Tan-Chr11:17918570 1.30E-14 dispersed
Tan10g0517 Tan-Chr10:4141748 Tan08g0395 Tan-Chr8:3642204 2.70E-12 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g900 . . . . . . . . . . . Cma14g01896 . Car14g01698 Sed02g1501 Cpe08g00399 Cpe03g01595 Bhi01g00229 Tan10g0517 Cmetu06g0717 . Hepe05g1763 . Lcy11g1777 . . . . . . . . . . . Lsi05g01844 . . Cme06g00379 . . . . . . . Bma06g01282 . Cmo06g01251 Cmo14g01948 . . . . . . . . . . . . . . . . . . . . . Csa03g01093 Chy06g00362 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006891 1 2 1 1 1 1 0 1 1 1 1 1 2 0 1 2 1 1 2 1 1 1 1 1 1 1 0 8 1 0 37