Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g0526 | ATGGAGAAAGACGATAACTACTCGAACGAAGCTCCAATGCCTCCAAATTTCCCCACCCACCACCAAGATCTCTACAACAACCAAGACCAATTCATGAGGTCTCGCCCCCTCGAAACCTCCGGCGACAACTCCGCCGGAATCCTCACCTACTTTCCGGCCAACCCTCCTCCGCTGCAGCCGATTACTTCATTCGACAAACTCAGCTTCGCGGAGGTTATGCAGTTCGCCGACTTTGGTCCGAAGCTCAGCCTCAACCGGTTCGACGAGCAGGACGAACCGGCCGGGATCGACCCGGTCTACTTCCTGAAGTTCCCGGTTCTGAATAATGAGAGGGTGGACGAGGCGGCGGCCGGAGAGGAGGAGGCGGCGGAGGAGATGGGAGGGAGAATTGTTGGGGAATTAGAAGAGGAGGAGAATTTTAAAAATAATAATAATAATAATAATTGCAGTAATAATAATGGTAATAATAAAAGAAAAAGAGGAAGGACGGTAAAAACAAGTGAAGAAGTGGAGAGTCAAAGAATGACGCATATTGCGGTGGAAAGGAATCGAAGGAAGCAGATGAATGAGCATCTTCGCGTTTTGCGCTCTCTCATGCCTGGTTCTTACGTTCAAAGGGGAGATCAAGCTTCAATAATCGGCGGAGCAATCGAGTTCGTGAGGGAGCTCGAGCAGCTCCTCCAATGTCTAGAATCCCAAAAACGGCGTCGTCTCCTCGGAGAACCGCCACTGCAGACTGCCGACACGCCATCGCAGCAGCAACCGCCATTTCTACCACCGCCGCCGGGAGCCGCTAATTTTGCTGCTCATCAAAACGACGGCCAAATCTTCGAAACGACGGCGGAGAGCAAATCGTGCCTTGCTGACGTGGAAGTGAAGGTTCTAGGGTTCGACGCTATGATAAAAATCCTTTCGAGAAGACGGCCGGGACAGCTCATCAAAGCCATTGCCGCCCTTGAAGATTTGCAACTCAATATTCTTCATACTAATATTACCACCATTGAACAAACTGTTCTTTATTCCTTCAACGTCAAGATAGCAAACGAGTCAAGATTCACAGCAGAAGACATAGCGAGCTCAGTTCAACAGATATTCAGTTTTATTCATGCAAACACCGGAGCCGACAATATTAAAAATATTATCCGAAAGATGTTAAATGTGTGGAAGAACTTTTCGTTAAAAAAAAAAAAAGAGGGGAATAAATAA | 1206 | 47.84 | MEKDDNYSNEAPMPPNFPTHHQDLYNNQDQFMRSRPLETSGDNSAGILTYFPANPPPLQPITSFDKLSFAEVMQFADFGPKLSLNRFDEQDEPAGIDPVYFLKFPVLNNERVDEAAAGEEEAAEEMGGRIVGELEEEENFKNNNNNNNCSNNNGNNKRKRGRTVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEPPLQTADTPSQQQPPFLPPPPGAANFAAHQNDGQIFETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIANESRFTAEDIASSVQQIFSFIHANTGADNIKNIIRKMLNVWKNFSLKKKKEGNK | 401 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4203530 | 4209958 | - | Tan0021683.2 | Tan10g0526 | 765320 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g0526 | 401 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 172 | 245 | IPR036638 | GO:0046983(InterPro) | |
Tan10g0526 | 401 | FunFam | Basic helix-loop-helix transcription factor | 163 | 238 | - | - | |
Tan10g0526 | 401 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 172 | 223 | IPR011598 | GO:0046983(InterPro) | |
Tan10g0526 | 401 | MobiDBLite | consensus disorder prediction | 242 | 262 | - | - | |
Tan10g0526 | 401 | CDD | ACT_UUR-ACR-like | 300 | 364 | - | - | |
Tan10g0526 | 401 | ProSiteProfiles | ACT domain profile. | 300 | 382 | IPR002912 | - | |
Tan10g0526 | 401 | MobiDBLite | consensus disorder prediction | 161 | 175 | - | - | |
Tan10g0526 | 401 | Pfam | Helix-loop-helix DNA-binding domain | 173 | 224 | IPR011598 | GO:0046983(InterPro) | |
Tan10g0526 | 401 | MobiDBLite | consensus disorder prediction | 141 | 157 | - | - | |
Tan10g0526 | 401 | MobiDBLite | consensus disorder prediction | 140 | 175 | - | - | |
Tan10g0526 | 401 | CDD | bHLH_AtFAMA_like | 175 | 243 | - | - | |
Tan10g0526 | 401 | PANTHER | TRANSCRIPTION FACTOR FAMA | 89 | 367 | IPR044283 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010052(InterPro)|GO:0010374(PANTHER)|GO:0045893(PANTHER) | |
Tan10g0526 | 401 | Gene3D | - | 164 | 238 | IPR036638 | GO:0046983(InterPro) | |
Tan10g0526 | 401 | SMART | finulus | 178 | 229 | IPR011598 | GO:0046983(InterPro) | |
Tan10g0526 | 401 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g0274 | Tan-Chr9:23636714 | Tan10g0526 | Tan-Chr10:4203530 | 6.90E-30 | dispersed | |
Tan10g0006 | Tan-Chr10:272000 | Tan10g0526 | Tan-Chr10:4203530 | 7.70E-36 | dispersed | |
Tan10g0526 | Tan-Chr10:4203530 | Tan10g0885 | Tan-Chr10:7421692 | 8.70E-37 | dispersed | |
Tan10g0525 | Tan-Chr10:4203530 | Tan10g0526 | Tan-Chr10:4203530 | 9.80E-190 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28506 | PF00010 | HLH | 8.50E-10 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g0526 | K26213 | - | csv:101214530 | 531.561 |