Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0527 ATGGGTAGCGGAGAAAAGGTCTTCACCTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATCAGTGGCAAGGTGTATGATGTGACCAAATTCTTAGAAGACCATCCTGGTGGTGATGATGTTTTGTTGTCAGCTACAGGAAAGGACGCTACCGATGATTTCGAAGACGTGGGGCACAGTGACAATGCAAGAGAAATGATGGATCAATACTATGTTGGGGAGGTTGATGCTTCGACAATTCCGAAGAAGGTCGCATACACACCTCCAAAACAGCCTCATTACAATCAGGACAAGACGTCTGAGTTCATCATCAAGCTTCTCCAGTTCCTCGTTCCGCTTGCGATTTTGGGATTGGCAGTCGCCATACGTTTCTACACCAAACAAGCTTGA 405 46.67 MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEVDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4230019 4233072 + Tan0014958.1 Tan10g0527 765321

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0527 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Tan10g0527 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Tan10g0527 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Tan10g0527 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Tan10g0527 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Tan10g0527 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Tan10g0527 134 FunFam Cytochrome b5 type B 3 85 - -
Tan10g0527 134 Gene3D - 2 86 IPR036400 -
Tan10g0527 134 SMART Cyt_b5_2 8 81 IPR001199 -
Tan10g0527 134 PANTHER CYTOCHROME B5 5 131 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Tan10g0527 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Tan10g0527 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0527 K23490 - - csv:101214209 275.018
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2283 Tan-Chr2:91698087 Tan10g0527 Tan-Chr10:4230019 2.30E-26 dispersed
Tan02g2284 Tan-Chr2:91698087 Tan10g0527 Tan-Chr10:4230019 1.40E-22 dispersed
Tan06g1967 Tan-Chr6:61804512 Tan10g0527 Tan-Chr10:4230019 2.50E-08 dispersed
Tan07g0521 Tan-Chr7:8904175 Tan10g0527 Tan-Chr10:4230019 1.40E-52 dispersed
Tan07g0522 Tan-Chr7:8904175 Tan10g0527 Tan-Chr10:4230019 9.50E-42 dispersed
Tan10g0077 Tan-Chr10:1104879 Tan10g0527 Tan-Chr10:4230019 7.80E-37 dispersed
Tan08g0116 Tan-Chr8:1005662 Tan10g0527 Tan-Chr10:4230019 3.50E-15 transposed
Tan10g0527 Tan-Chr10:4230019 Tan06g2314 Tan-Chr6:74361886 7.40E-57 wgd
Tan10g0527 Tan-Chr10:4230019 Tan07g2098 Tan-Chr7:72379437 8.70E-50 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156