Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0527 ATGGGTAGCGGAGAAAAGGTCTTCACCTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATCAGTGGCAAGGTGTATGATGTGACCAAATTCTTAGAAGACCATCCTGGTGGTGATGATGTTTTGTTGTCAGCTACAGGAAAGGACGCTACCGATGATTTCGAAGACGTGGGGCACAGTGACAATGCAAGAGAAATGATGGATCAATACTATGTTGGGGAGGTTGATGCTTCGACAATTCCGAAGAAGGTCGCATACACACCTCCAAAACAGCCTCATTACAATCAGGACAAGACGTCTGAGTTCATCATCAAGCTTCTCCAGTTCCTCGTTCCGCTTGCGATTTTGGGATTGGCAGTCGCCATACGTTTCTACACCAAACAAGCTTGA 405 46.67 MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEVDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4230019 4233072 + Tan0014958.1 Tan10g0527 765321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0527 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Tan10g0527 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Tan10g0527 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Tan10g0527 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Tan10g0527 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Tan10g0527 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Tan10g0527 134 FunFam Cytochrome b5 type B 3 85 - -
Tan10g0527 134 Gene3D - 2 86 IPR036400 -
Tan10g0527 134 SMART Cyt_b5_2 8 81 IPR001199 -
Tan10g0527 134 PANTHER CYTOCHROME B5 5 131 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Tan10g0527 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Tan10g0527 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2283 Tan-Chr2:91698087 Tan10g0527 Tan-Chr10:4230019 2.30E-26 dispersed
Tan02g2284 Tan-Chr2:91698087 Tan10g0527 Tan-Chr10:4230019 1.40E-22 dispersed
Tan06g1967 Tan-Chr6:61804512 Tan10g0527 Tan-Chr10:4230019 2.50E-08 dispersed
Tan07g0521 Tan-Chr7:8904175 Tan10g0527 Tan-Chr10:4230019 1.40E-52 dispersed
Tan07g0522 Tan-Chr7:8904175 Tan10g0527 Tan-Chr10:4230019 9.50E-42 dispersed
Tan10g0077 Tan-Chr10:1104879 Tan10g0527 Tan-Chr10:4230019 7.80E-37 dispersed
Tan08g0116 Tan-Chr8:1005662 Tan10g0527 Tan-Chr10:4230019 3.50E-15 transposed
Tan10g0527 Tan-Chr10:4230019 Tan06g2314 Tan-Chr6:74361886 7.40E-57 wgd
Tan10g0527 Tan-Chr10:4230019 Tan07g2098 Tan-Chr7:72379437 8.70E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0527 K23490 - csv:101214209 275.018