Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0608 ATGGATTCAGAATTTTGCGCCTCCCATCTCTCCGGCCTCTTCGGCCCCAACACCACCAACGCCACCGCCGCTGCAAATTTCATCTGCGACCAACTCACCACCATCTCCAACAACTTCTCCGATACCAAAAACGCCCTCGACAACACCTACCTTCTCTTCTCCGCCTACCTCGTCTTCTCTATGCAACTCGGCTTCGCCATGCTCTGTGCCGGCTCCGTCCGCGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGTGGCCTCTTCTACTACCTCTTCGGCTACGCCTTCGCGTTCGGATCCCCCTCCAACGGCTTCATCGGCCGTCACAACTTCGGTCTCACCTCCTTCCCGACCTCCTCTGCCGATTACAGTGTCTTCCTCTACCAGTGGGCCTTTGCGATCGCCGCCGCGGGGATTACGAGTGGATCTATCGCTGAGCGGACTCAGTTCGTTGCGTATTTGATTTACTCCTCTGTTTTGACCGGATTCGTTTATCCGGTGGTTTCTCATTGGTTCTGGTCGCCCGATGGTTGGGCTGGGGCTGTGAAATCGGGAGGCGGATTGTTGTTTGGATCTGGAGTTATCGACTTCGCCGGCTCCGGCGTCGTCCATATGGTTGGGGGAATTGCAGGTCTGTGGGGCGCTTTGATCGAGGGGCCGAGAATAGGTCGATTCGATCACTCCGGCCGGTCGGTGGCTCTGCGAGGGCACAGCGCCTCTCTAGTCGTTCTCGGAACTTTCATGCTCTGGTTCGGATGGTACGGTTTCAATCCAGGTTCCTTCACGAAGATTCTCGTTCCATACACCACCGGAAACTTCTACGGCCAGTGGAGCGCCGTCGGACGCACGGCGGTGACCACCACGCTCGCCGGTTGCACAGCCGCGCTCACCACGCTCTTCGGGAAAAGATTCCTCTCCGGACATTGGAACGTGACGGACGTCTGTAACGGACTCCTCGGCGGCTTCGCCGCCATCACCGCCGGCTGCTCAGTCGTCGAGCCGTGGGCAGCGATCATCTGCGGCTTCGTCGCAGCCCTCGTCCTAATCTCCTGCAACCGGCTCGCGGAGAAGGTGAAGTACGACGATCCGCTGGAAGCCGCCCAACTCCACGGCGGCTGCGGTGCGTGGGGAGTGATATTCACGGCACTGTTCGCGACGAAGGAATACGTAACAGAAGTGTACGGAGGATCGGGGCGACCGTACGGACTACTGATGGGCGGCGGCGGGAGGTTACTGGCGGCGCATTTGATACAGATTGTGGTGATTGTGGGGTGGGTGAGTGCAACGATGGGGCCATTGTTCTTCGTTCTGCATAAACTGAAGCTTCTGAGAATCTCCAATGAAGACGAAATGGCGGGGATGGATCTGACCCGTCATGGAGGATTTGCTTACATATATCACGATGAAGATGAAGCGGAGAAAAGGGGGATTCAGTTAAGCAGAGTTGAACCAAAATCTGCAACTCCAAGTAGTGGAGATTATTGA 1506 57.17 MDSEFCASHLSGLFGPNTTNATAAANFICDQLTTISNNFSDTKNALDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGRHNFGLTSFPTSSADYSVFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPVVSHWFWSPDGWAGAVKSGGGLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGRSVALRGHSASLVVLGTFMLWFGWYGFNPGSFTKILVPYTTGNFYGQWSAVGRTAVTTTLAGCTAALTTLFGKRFLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFVAALVLISCNRLAEKVKYDDPLEAAQLHGGCGAWGVIFTALFATKEYVTEVYGGSGRPYGLLMGGGGRLLAAHLIQIVVIVGWVSATMGPLFFVLHKLKLLRISNEDEMAGMDLTRHGGFAYIYHDEDEAEKRGIQLSRVEPKSATPSSGDY 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4967294 4969057 - Tan0011264.1 Tan10g0608 765402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0608 501 Gene3D Ammonium transporter AmtB like domains 25 490 IPR029020 -
Tan10g0608 501 PANTHER AMMONIUM TRANSPORTER 21 480 - GO:0005887(PANTHER)|GO:0008519(PANTHER)|GO:0072488(PANTHER)|GO:0097272(PANTHER)
Tan10g0608 501 FunFam Ammonium transporter 28 486 - -
Tan10g0608 501 SUPERFAMILY Ammonium transporter 44 452 - -
Tan10g0608 501 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Tan10g0608 501 Pfam Ammonium Transporter Family 50 471 IPR024041 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Tan10g0608 501 NCBIfam ammonium transporter 47 471 IPR001905 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2341 Tan-Chr6:75480335 Tan10g0608 Tan-Chr10:4967294 1.70E-237 dispersed
Tan08g1053 Tan-Chr8:18443531 Tan10g0608 Tan-Chr10:4967294 2.10E-205 dispersed
Tan10g0608 Tan-Chr10:4967294 Tan07g2156 Tan-Chr7:73198943 3.20E-198 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0608 K03320 - csv:101208366 887.486