Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0657 ATGAGAGCAAAGACCTGGATTAACGAGAAAATTTTTGGCCTCAAGAGTAAATTTAGAAAGATGATAAATTGTATTCGTTCAGGGGATCAATTAAGAGTAGATGAAATGATGCATTCATCAGATTCTCTGGCAACTCGAGACTATTCAGCCAGTGGTTTTTCATCACGAACTGGGGAGGTGGAAACAAAGGTGGATAATGGCAACATTGAAGAAGCTGAATCATCTCTTCGTGAGAGTGGCTATTTGAATTATGAGGAAGCACGTGCTTTACTTGGAAGGCTCGAGTATCAAAAGGGTAACATAGAAGCTGCTCTTCATGTTTTTGAAGGAATAGATATTGCTGCTGTAATTTCCAGGATAAAAGCTTCCATTTCAACGAGATATGGACAAAATAGACGTCAATCACAAAGCGATGTTGTGCCTATTATGTCTATGCATGCCATTAGTTTACTCCTTGAAGCTATTTTTCTGAAAGCAAAATCATTACAGGGTTTAGGAAGGTTTGTAGAGGCAGCCAAATCATGCAAACTAATTTTAGACACTGTTGAATCTGCATTACCGGAAGGCTTACCTGAAAACTTTGCTATTGATTGTAAATTGCAAGAGACACTAACGAAGGCTGTCGAATTGCTTCCAGAATTGTGGAAATCTGCCGGATCTCCAGAAGAATCTATCTTTTCATACAGGCGTGCCCTTCTCTATCAATGGAATCTAGAAATGAAAACCAGAGCAAAAATAGAAAAAGAGTTTGCAATATTCCTTCTCTACAGTGGTTGTGATGCAAGTCCTCCCAATCTCCGTTCACAGATGGAAAGCTCATTTGTGCCAAGAAATAATATGGAAGAGGCCATTCTTCTGTTAATGGATCTGATGAGAAAGTATATACTTGGATTGATCGTATGGGACCCATCAATAATAGAGCATCTCTCGTTTGCACTGTCTATTTCAGGGGAATTTGGAGCTCTAGCTAATGAGGTCGAACAATTGCCTCCAGGAATCATAGGAAGGAAGGAAAAGTACTGCACCCTAGCTCTTTGTTACTATGGGGAAGGTAAAAGCTTAGTTGCGTTGAATCTTTTGAAGAACTTCTTGAGTAACATAGAGAATGTAGACTGCTTACTGGAATTGTTGTTGGCTTCAAAGCTCTGTGGAGAAAATTTGGTTTGTCTTGATGAGGGGGTGGCTTACACATTGAGAGTGCTTTCGGAACTGTATGGTAAATGCATCCAGATGGCTTCTGTTGCTAATTGCTTACATGGTGTGTTATTGTCAGCTATATCCAAATCAGTTGCTTCTGATTCTCAAAAAACTTTGAAGCAATCTGAAGCACTCAAGGCACTACAAACTGCTGAGCAACTAATGAGACAAAGAGATCCATTCATTGTTTATCATCTTTGTCTTGAATATGCTGAACAGAGGAAGCTGGATATTGCTCTTTACTATGCAAAACAGCTAGTGAAACTCGAGGCTGGCTCTAGTCTGAAGTCTTACATCCTCTTGGCCAGAATATTGTCAGCCCAGAAACGGTTTGTGGATGCAGAGACTGTACTCAATGCTGCTCTTGAGCAGACTGGGAAGTGGGAACAGGGCGAACTCTTACGAACTAAAGCTAAGCTCCAGATTGCACAGGGCCAGTTAAAGAGCAGTATAGGAACATATACTCATCTTCTCGCTATAATTCAAGTCCGGACCAAAAGTAGTGGGGTTGGGAAGATTCTTTCAAAGGATATGAGAACAGATAGAAGTCTGGAAATAGATACATGGAACGACTTGGCCAATATTTACACAAGCTTGTCTCAGTGGCGGGATGCTGAGATCTGTCTAACAAAATTGCAGGCAATCAATCCCTATTCTGCTTCTAAGTGGCATTCCACAGGTTTACTCTATGAGTCGAAGGGTCTCCCACGAGACGCTTTGCAGGCGTACAACAAAGCATTGGACATTGATCCTGCCCATGTTCCCAGCTTGATATCAACTGCCTGTCTTCTCCAACAACTAGGCGGCAGCCAGTCATTTCCTGTGGTAAGAAGCTTGCTAACCGACGCCCTTCGACTCGATCGAGCAAATCCTTCTGCATGGTACAATCTTGGGCTGCTATATAAAGCTGATGCCGGGGCATCAGCGCTGGAGGTAGCCGAATGCTTTGAGGCTGCAACTCTGCTTGAAGAGTCGGCACCAGTTGAACCTTTCAGATGA 2196 42.21 MRAKTWINEKIFGLKSKFRKMINCIRSGDQLRVDEMMHSSDSLATRDYSASGFSSRTGEVETKVDNGNIEEAESSLRESGYLNYEEARALLGRLEYQKGNIEAALHVFEGIDIAAVISRIKASISTRYGQNRRQSQSDVVPIMSMHAISLLLEAIFLKAKSLQGLGRFVEAAKSCKLILDTVESALPEGLPENFAIDCKLQETLTKAVELLPELWKSAGSPEESIFSYRRALLYQWNLEMKTRAKIEKEFAIFLLYSGCDASPPNLRSQMESSFVPRNNMEEAILLLMDLMRKYILGLIVWDPSIIEHLSFALSISGEFGALANEVEQLPPGIIGRKEKYCTLALCYYGEGKSLVALNLLKNFLSNIENVDCLLELLLASKLCGENLVCLDEGVAYTLRVLSELYGKCIQMASVANCLHGVLLSAISKSVASDSQKTLKQSEALKALQTAEQLMRQRDPFIVYHLCLEYAEQRKLDIALYYAKQLVKLEAGSSLKSYILLARILSAQKRFVDAETVLNAALEQTGKWEQGELLRTKAKLQIAQGQLKSSIGTYTHLLAIIQVRTKSSGVGKILSKDMRTDRSLEIDTWNDLANIYTSLSQWRDAEICLTKLQAINPYSASKWHSTGLLYESKGLPRDALQAYNKALDIDPAHVPSLISTACLLQQLGGSQSFPVVRSLLTDALRLDRANPSAWYNLGLLYKADAGASALEVAECFEAATLLEESAPVEPFR 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5311663 5316452 - Tan0000264.1 Tan10g0657 765451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0657 731 Pfam Tetratricopeptide repeat 626 652 IPR019734 GO:0005515(InterPro)
Tan10g0657 731 PANTHER PROTEIN NPG1 14 731 IPR043376 -
Tan10g0657 731 SMART tpr_5 494 527 IPR019734 GO:0005515(InterPro)
Tan10g0657 731 SMART tpr_5 585 618 IPR019734 GO:0005515(InterPro)
Tan10g0657 731 SMART tpr_5 152 185 IPR019734 GO:0005515(InterPro)
Tan10g0657 731 SMART tpr_5 619 652 IPR019734 GO:0005515(InterPro)
Tan10g0657 731 SUPERFAMILY TPR-like 531 701 IPR011990 GO:0005515(InterPro)
Tan10g0657 731 Gene3D Tetratricopeptide repeat domain 571 726 IPR011990 GO:0005515(InterPro)
Tan10g0657 731 ProSiteProfiles Leucine-rich repeat profile. 353 374 IPR001611 GO:0005515(InterPro)
Tan10g0657 731 Gene3D Tetratricopeptide repeat domain 60 568 IPR011990 GO:0005515(InterPro)
Tan10g0657 731 ProSiteProfiles TPR repeat profile. 619 652 IPR019734 GO:0005515(InterPro)
Tan10g0657 731 SUPERFAMILY TPR-like 441 559 IPR011990 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g2189 Tan-Chr7:73379230 Tan10g0657 Tan-Chr10:5311663 1.20E-193 dispersed
Tan10g0657 Tan-Chr10:5311663 Tan10g0659 Tan-Chr10:5311663 0.00E+00 dispersed
Tan10g0657 Tan-Chr10:5311663 Tan10g0658 Tan-Chr10:5311663 0.00E+00 tandem
Tan02g1728 Tan-Chr2:80630565 Tan10g0657 Tan-Chr10:5311663 2.90E-152 transposed
Tan10g0657 Tan-Chr10:5311663 Tan07g2188 Tan-Chr7:73379230 2.20E-243 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0657 K21843 - csv:101206105 1298.11