Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0685 ATGGCAGCAGGAGAGCAACTGAAAGTGTTGAATGCGCTCGATGTAGCCAAAACCCAATGGTACCATTTCACTGCAATTGTAATAGCCGGAATGGGCTTTTTCACTGACGCTTATGATCTCTTCTGCGTTTCTCTCGTCACCAAATTGTTGGGCCGAATTTACTATCACAAAGAAGGCTCAGAAAAGCCTGGTGAATTGCCTTCAAACATCGCCGCCGCCATCAACGGCGTCGCTTTTTGCGGCACCCTCTCCGGCCAGCTCTTCTTCGGCTGGCTCGGTGACAAAATGGGCCGCAAACGAGTCTATGGTATGACCCTTATGCTTATGGTCATTTGCTCTGTCGCTTCAGGTCTTTCTTTCAGCAGCACCCCAACATCTGTCGTTGCCACTCTTTGCTTCTTCCGATTCTGGCTCGGCTTTGGCATCGGCGGCGATTACCCACTTTCCGCCACCATCATGTCGGAATATGCCAATAAAAGGACGAGGGGTGCATTCATCGCCGCCGTGTTTGCGATGCAGGGGTTTGGGATTTTGGCTGGTGGGGTGGTGGCTATCATTGTCTCCGCCGCTTTCGACGCCAAATACCCAGCTCCGGCGTACCAGGAAAATGCCGCCGCCTCCACCGTTCCACAGGCGGATTACGTGTGGCGAATCATTGTGATTTTTGGTGCTTTTCCAGCTCTCCTCACTTATTACTGGCGAATGAAAATGCCTGAAACTGCTCGTTACACCGCCTTGGTTGCTAAAAACGCCAAACAGGCGGCGGCCGATATGTCTAAAGTGCTGCAGGTCGAATTGGAATCCGAGCAGGACAAAGTCGACGAGGTAAAATCGAAGAACGATTTCGGTTTGTTCTCGAGGAGCTTTGTTCGTCGACATGGGCTTCATTTGCTCGGAACCACCACCACTTGGTTCTTGTTGGACATTGCATTTTACAGTCAGAATCTCTTCCAAAAAGACATTTTCACCGCCATTGGCTGGCTTCCTCCCGCCAAGACAATGAACGCCATTGAAGAGGTTTTCAAAATCGCCAGAGCTCAAACTCTAATTGCACTATGCAGTACAGTTCCAGGGTATTGGTTCACCGTCGCCTTGATCGACGTAATGGGCCGATTCGCAATTCAATTGATGGGGTTCTTCTTCATGACGGTGTTCATGTTCGCATTGGCCATTCCTTACAAACACTGGACTCTGGAAGCCAACAGAATTGGGTTCGTCGTTATGTATTCCCTCACGTTTTTCTTCGCGAATTTCGGGCCTAACGCCACCACTTTCGTGGTTCCGGCGGAGATTTTCCCGGCCAGGCTTCGATCGACCTGCCATGGAATATCAGCCGCATCGGGAAAAGCAGGGGCCATTGTTGGGGCGTTTGGATTTCAGTATGCGGAAAAAGGGCTTGGAGTGAAAAAGACATTGATAATTCTGGGCGTTGTGAATGCTCTTGGGATGTTCTTCACTTTGTTGGTTCCTGAATCGAAGGGGAAATCTTTGGAAGAAATGTCTGGCGAAGCTGGAGAAGAAGTTGAAAGCAAAACAGAGTCGAGGAATCAATCTGATCATAGAACTATGCCTGTTTGA 1578 49.68 MAAGEQLKVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYHKEGSEKPGELPSNIAAAINGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFSSTPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSAAFDAKYPAPAYQENAAASTVPQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQDKVDEVKSKNDFGLFSRSFVRRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWLPPAKTMNAIEEVFKIARAQTLIALCSTVPGYWFTVALIDVMGRFAIQLMGFFFMTVFMFALAIPYKHWTLEANRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFQYAEKGLGVKKTLIILGVVNALGMFFTLLVPESKGKSLEEMSGEAGEEVESKTESRNQSDHRTMPV 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5556828 5564018 - Tan0019520.1 Tan10g0685 765479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0685 525 Coils Coil 259 279 - -
Tan10g0685 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 10 499 - -
Tan10g0685 525 SUPERFAMILY MFS general substrate transporter 13 501 IPR036259 -
Tan10g0685 525 Pfam Sugar (and other) transporter 27 501 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Tan10g0685 525 FunFam Inorganic phosphate transporter 1-6 21 515 - -
Tan10g0685 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 25 494 IPR020846 GO:0022857(InterPro)
Tan10g0685 525 MobiDBLite consensus disorder prediction 498 525 - -
Tan10g0685 525 NCBIfam phosphate:H+ symporter 12 503 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Tan10g0685 525 CDD MFS_PhT 26 493 - -
Tan10g0685 525 Gene3D MFS general substrate transporter like domains 21 518 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5152 Tan-Chr1:116696426 Tan10g0685 Tan-Chr10:5556828 1.60E-147 dispersed
Tan10g0685 Tan-Chr10:5556828 Tan11g1301 Tan-Chr11:11154807 2.10E-216 dispersed
Tan10g0685 Tan-Chr10:5556828 Tan10g0686 Tan-Chr10:5591253 8.20E-229 tandem
Tan01g0158 Tan-Chr1:1443603 Tan10g0685 Tan-Chr10:5556828 2.90E-189 transposed
Tan10g0685 Tan-Chr10:5556828 Tan06g2413 Tan-Chr6:76501840 3.00E-231 wgd
Tan10g0685 Tan-Chr10:5556828 Tan07g2221 Tan-Chr7:73629893 3.30E-230 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0685 K08176 - csv:101209582 916.376