Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0694 ATGGATCCATCACAGGATCCGAGCTGTTGGGATTTCCTTGATTACTCCTTGTTCGTCGACCACGACAGTATTCTTAACCCTTCCCTCCGTCCTTCCTGGCCGCCTAATGATTCCAGGGATGGTGGTGCGGATACGGATGTTTCAGCCGGGCGTGTTGAATCTGAAGAAAACGATTGTTCGCGGAAGAGGGCACGAGATGGGCCGTGCGCTGGACCAACTTCAAAAGCTTGTCGCGAGAGATTGCGGAGAGAGAGATTAAATGATAGGTTTCTAGATTTGAGCCATGCTTTAGAACCCGATGGACCTACCAAAACTAACAAGCCGGCCATACTTGATGATGCCATTAGAGTGTTAAATCAACTTAAGACTGAAGCCGAAGAGCTCAAACAAACTAACCAAAAGCTACGGGAAGAAGTGGAGTGTTTAAAGGCCGAGAAGAATGATCTTCGGAAAGAGAAAATCATTTTGAAGGAAGACAAAGAAAGAATCGAACAACAGTTGAAATCCATAGCCATTCCACCACCAGGGCTTATCCCTGGTCATCCAGCTGCATATCATGCTGCTCCAGGTAAGATGGCTGTTTTTCCTGGTTATGGTTTGGTCCCAATGTGGCAATATCTTCCTCCGTCCGTACGTGATACATCTCAAGATCATGAGCTCAGGCCTCCTGCTGCCTAG 678 47.49 MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCSRKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQLKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPGHPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5709531 5711699 + Tan0013236.1 Tan10g0694 765488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0694 225 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 141 IPR036638 GO:0046983(InterPro)
Tan10g0694 225 MobiDBLite consensus disorder prediction 26 75 - -
Tan10g0694 225 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 121 IPR011598 GO:0046983(InterPro)
Tan10g0694 225 Gene3D - 73 154 IPR036638 GO:0046983(InterPro)
Tan10g0694 225 SMART finulus 76 127 IPR011598 GO:0046983(InterPro)
Tan10g0694 225 MobiDBLite consensus disorder prediction 44 65 - -
Tan10g0694 225 Pfam Helix-loop-helix DNA-binding domain 74 122 IPR011598 GO:0046983(InterPro)
Tan10g0694 225 Coils Coil 111 166 - -
Tan10g0694 225 PANTHER BHLH TRANSCRIPTION FACTOR 43 225 IPR044818 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0006879(InterPro)|GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3165 Tan-Chr5:83609454 Tan10g0694 Tan-Chr10:5709531 2.10E-19 dispersed
Tan05g3166 Tan-Chr5:83609454 Tan10g0694 Tan-Chr10:5709531 9.70E-20 dispersed
Tan10g0694 Tan-Chr10:5709531 Tan01g4506 Tan-Chr1:110703556 8.90E-31 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28521 PF00010 HLH 9.10E-08 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0694 - - - 0.0