Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0722 ATGAAACCTTCTCGTCTGAATTCCCTCCGGCGAGTTCAGTCCGGCGACCTCATCATGAAGCTCCCCGACGATCCCGACGAATCCAAAAGGCCCCAATTCCCTCTCGATTCCACCTGTTACAAAATCATCGACGAAATTGGTGTCGGTGTCAGCGCCGTGGTCTATAAAGCCATTTGCATTCCGATGAATTCGGCGGTGGTGGCTATCAAAGCCATCGACCTCGATCGATCACGAGCCGATTTCGACGACATTCGAAGAGAAGCTAAGATTCTGTCACTTCTCTCTCACCCCAACATTCTAAACGCCCACTGTTCCTTCACCGTCGATCGTCGGCTTTGGGTCGTCATGCCGTTCATGTCGGCCGGATCTCTGCAGTCCATCATTACGTCGTCATTTCCCGATGGATTGCCGGAACCCTGCATCGCCGTCGTTCTCCGGGAAATTCTAAACGCTTTGGCTTACCTCCACGATCAAGGACATCTCCACCGCGACATTAAAGCCGGAAACATTCTGATGGACTCAAATGGGTCCGTCAAGCTCGCAGATTTCGGAGTTTCGGCGTCAATTTTCGAGACGAATCCGAAACAGGGGATGTCAATTTCTCCGTCATCGACGTCGATGATGCTGAAGGAATTCGCCGGAACGCCGTACTGGATGGCACCGGAGGTGATCCACTCGCACAATGGGTATAGTTTGAAGGCGGATATATGGTCATTTGGAATCACAGCGTTGGAATTAGCCCATGGAAGACCTCCTCTATCTCATCTCCCTCCTTCTAAATCTCTGCTTCTGAACATCACACGGCGTTTTCGATTCTCCGATTACGAAAAGCTCCAACACAGCAAGAACAAGAACAAATTCTCAAAAGGGTTCAAGGAATTGGTCGCGTCTTGCCTCGATCAAGAGCCGTCGAGAAGACCCTGCGCACAGAAATTGCTAAAGCATTCGTTCTTCAGGAACTGCAAGGGCCCTGATCTTGTAGTGAAAACTGTATTACAAGGTTTGCCGAGCGTGGAAGAACGGTTCAAATTGGGGAAATTGCAGCGATTGCCGTCGATGAAAACAGAGGAAGAGGAGGAAGAGGAATTGGAGAAGGAGAATATAAAACAGAGGAGGATCAGTGGGTGGAATTTCAACGAGGATGGATTAGAGCTGGACGCTGTTTTTCCAGGGGAAAATTTCGAGGAGGATGAGAGTTCGATAATCAAACAAGTTCGATTCGGAGGGGAATCGATCATGGAGGAGAAGGGGTCAGGGAATTCGAGCGAGTGCTGTTCCGGGGTGTGGGATTTGAGTTCGCCGCCGGGGAACGGGAGGAGCGGCGGCGGAGAGGAGGAGGTTGTGGAGAGAGAGTGGATCGTGGGGGGATTGGTGGCGCTGAAGAGAAGCTTGGACGAGCAGAGGAAGGCGGTGGGGAGTTTGATAGAGCTGATGGAAGGGGAGAAAGTGGGAGAGATGAGCAGAGAAGAGCAGATGGGGAGATTGATAGAGAAGATGAGGAAGGAATTGGAGAATGAGAGAAAGAGGAACTTTGAATTGGAGATGGAGTTGGAATTTCTCAGGCTTCAGATTTCTGCCGCCATTGATAACTGA 1593 50.6 MKPSRLNSLRRVQSGDLIMKLPDDPDESKRPQFPLDSTCYKIIDEIGVGVSAVVYKAICIPMNSAVVAIKAIDLDRSRADFDDIRREAKILSLLSHPNILNAHCSFTVDRRLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAVVLREILNALAYLHDQGHLHRDIKAGNILMDSNGSVKLADFGVSASIFETNPKQGMSISPSSTSMMLKEFAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLLLNITRRFRFSDYEKLQHSKNKNKFSKGFKELVASCLDQEPSRRPCAQKLLKHSFFRNCKGPDLVVKTVLQGLPSVEERFKLGKLQRLPSMKTEEEEEEELEKENIKQRRISGWNFNEDGLELDAVFPGENFEEDESSIIKQVRFGGESIMEEKGSGNSSECCSGVWDLSSPPGNGRSGGGEEEVVEREWIVGGLVALKRSLDEQRKAVGSLIELMEGEKVGEMSREEQMGRLIEKMRKELENERKRNFELEMELEFLRLQISAAIDN 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6003188 6005002 - Tan0012659.1 Tan10g0722 765516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0722 530 SMART serkin_6 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0722 530 Coils Coil 486 523 - -
Tan10g0722 530 ProSiteProfiles Protein kinase domain profile. 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0722 530 Gene3D Transferase(Phosphotransferase) domain 1 122 372 - -
Tan10g0722 530 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 32 397 IPR047173 GO:0043539(InterPro)|GO:1902456(PANTHER)
Tan10g0722 530 FunFam Serine/threonine-protein kinase BLUS1 29 118 - -
Tan10g0722 530 Coils Coil 353 373 - -
Tan10g0722 530 Gene3D Phosphorylase Kinase; domain 1 29 118 - -
Tan10g0722 530 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524(InterPro)
Tan10g0722 530 SUPERFAMILY Protein kinase-like (PK-like) 40 334 IPR011009 -
Tan10g0722 530 Pfam Protein kinase domain 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g0722 Tan-Chr10:6003188 Tan11g0629 Tan-Chr11:5528399 1.70E-93 dispersed
Tan10g0722 Tan-Chr10:6003188 Tan07g1361 Tan-Chr7:63711653 4.60E-94 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68124 PF00069 Pkinase 7.00E-59 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0722 K08835 - csv:101215648 845.114