Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g0779 | ATGCCCGTACGGCAAATGAAAGAGAGCTCCGAGCAGCACCTTGTAATCAAAACCCACTTTCAGAACACTGTTCAAAAACCTCCAAAATCAACCCAAAATGGCAAAGGCCCGCCGAATCTGGAACACCAAAACATCAAATCTCGAAACCCATCTTCTCCTCCGAGCAAAAACAGGGGCCGGAGAAGGAGCAGAGGCGGCCGGAAATCCGACCAGGGAGAAGTCTTTATGAGGCCCAGTTCTCGGCCCTGCACGGTGGCGCGCAAACCTGACTCACCGGAGATTACCGCCGGAGCTCTAGTGGCGAGTACTAATCCTAATCGTAATCCAAATGGTGCAAACATTTGTGGGATGGAAATGGGTTTTCGAAATTCAAGCAAGTCTGTGAGTTTTGCGCCAAGGCCTGGATTCGGACAAGTTGGGACAAAGTGTATTGTAAAAGCAAACCATTTCTTTGCAGAGTTACCGGACAAAGATTTGAATCAATATGATGTTACAATTACTCCTGAAGTGGCATCAAGAACTGTGAACAGAGCTATCATGGCTGAATTGGTGAGATTATACAGAGAATCTGATCTGGGAAAAAGATTACCAGCTTATGATGGCAGAAAGAGTCTGTATACAGCCGGTGAGCTTCCTTTTGGTTGGAAAGAGTTTAACATCAAGCTTGTGGATGAAGAAGATGGAGTCAGTGGTCCCAAGAGGGAGAGGGAATATAAAGTGGTTATTAAGTTTGTTGCTCGTGCAAATTTACACCATTTGGGTCAGTTTCTTGCGGGTAAGCGTGCCGATGCTCCACAAGAAGCTCTTCAAATACTGGACATTGTATTGAGAGAGCTGTCATCCAAAAGGTACTGTCCTATCGGGAGATCCTTCTTTTCTCCTGATATTAGATTGCCTCAACGGCTCGGTGATGGGCTAGAATCATGGTGTGGTTTTTACCAGAGTATAAGACCTACTCAAATGGGACTATCTCTGAACATCGATATGGCTTCAGCTGCATTTATCGAGCCTCTCCCTGTCCTTGAGTTTGTTGCTCAGCTTCTAGGGAAAGATGTTTTGTCCCGACCGTTGTCTGATTCCGATCGCGTAAAGATAAAAAAGGCTCTTAGAGGGGTGAAAGTTGAAGTAACGCACCGGGGTAATGTAAGGCGGAAGTATCGGGTTTCAGGTCTGACATCACAGCCTACAAGAGAACTAGTGTTTCCTGTTGATGACAACTCGACCATGAAGTCAGTTGTTGAATACTTCCAAGAGATGTATGGCTTCACCATTCAACACACGCACCTCCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGCAAATTATTTACCAATGGAGGCATGTAAAATTGTAGGGGGACAAAGATATACAAAGAGATTGAATGAGAAGCAAATAACTGCACTTCTAAAAGTCACATGTCAAAGACCTAGGGATCGAGAAAATGACATTTTGCAGACTGTTCAACACAATGCCTATGACAATGATCCTTATGCAAAGGAGTTTGGGATTAAAATCAGTGAAAAGCTGGCTTCTGTTGAAGCTAGAATTCTTCCTCCTCCATGGCTGAAATATCATGATACTGGAAAAGAGAAGGATTGCTTGCCTCAAGTGGGTCAATGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAATCGGTGGGCATGTATCAACTTCTCAAGGAGCGTGCAAGAGAGCGTTGCTCGTGGATTTTGTTCTGAACTTGCTCAAATGTGTCAAGTGTCTGGAATGGAATTCAATCCAGAACCAGTTATTCCAATATACAATGCTAGGCCAGAACAGGTAGAGAAATCTTTGAAGCATGTTTATCATGCTTCCATGAACAAGACTAAAGGAAAAGAGTTAGAGCTACTATTAGCTATTTTACCTGACAATAATGGGTCGCTTTACGGTGATCTTAAGCGAATTTGTGAAACTGATCTTGGTTTAATATCACAATGCTGTCTTACCAAACACGTGTTCAAGATTAGTAAGCAGTACCTCGCTAATGTGTCACTGAAGATCAATGTCAAGATGGGTGGTAGAAACACTGTTCTTCTAGATGCTATCAGCTGCAGGATACCGCTTGTGAGTGACATACCAACGATAATTTTTGGAGCGGATGTGACCCATCCAGAGAACGGCGAAGATTCCAGCCCTTCAATAGCTGCTGTTGTAGCCTCTCAGGATTGGCCTGAGGTGACAAAATATGCTGGACTAGTATGTGCTCAGGCTCATAGACAAGAACTTATACAAGACTTGTACAAAACTTGGCAGGATCCTGTCCGTGGCACTGTTAGTGGTGGCATGATCAGGGATCTTCTGGTTTCCTTTAGGAGAGCAACAGGGCAGAAGCCTCTAAGAATAATATTTTACAGGGATGGCGTAAGCGAAGGACAATTCTATCAAGTATTACTTTACGAGTTGGATGCAATCAGGAAGGCATGTGCTTCTTTAGAACCGAATTACCAACCACCCGTAACGTTCATTGTTGTACAAAAGCGACACCACACCCGATTGTTTGCCAACAATTATAGAGACAGAAGTAGCACAGACAAGAGTGGAAACATTTTACCTGGCACCGTAGTCGACTCCAAAATATGCCATCCAACAGAATTTGATTTCTATCTCTGTAGCCATGCTGGAATTCAGGGGACAAGTCGGCCAGCACACTACCATGTTCTTTGGGATGAAAACAATTTTACTGCTGATGGAATTCAGTCGTTAACGAACAACCTTTGCTACACATATGCAAGGTGTACACGCTCAGTTTCTGTCGTTCCTCCAGCATACTATGCGCATTTAGCAGCATTCCGAGCTCGATTCTACATGGAACCAGAGATGCAGGAGAATGGGTCAGGTGGTCGTTCGGCCAAGAGTACACGTGCTACTGGAGAGACTGGGGTTCGTCCTTTGCCAGCTCTGAAGGAAAATGTGAAGAGAGTAATGTTTTACTGTTAG | 2967 | 44.02 | MPVRQMKESSEQHLVIKTHFQNTVQKPPKSTQNGKGPPNLEHQNIKSRNPSSPPSKNRGRRRSRGGRKSDQGEVFMRPSSRPCTVARKPDSPEITAGALVASTNPNRNPNGANICGMEMGFRNSSKSVSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVASRTVNRAIMAELVRLYRESDLGKRLPAYDGRKSLYTAGELPFGWKEFNIKLVDEEDGVSGPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRYCPIGRSFFSPDIRLPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVLEFVAQLLGKDVLSRPLSDSDRVKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVGGQRYTKRLNEKQITALLKVTCQRPRDRENDILQTVQHNAYDNDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQESVARGFCSELAQMCQVSGMEFNPEPVIPIYNARPEQVEKSLKHVYHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRRATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMQENGSGGRSAKSTRATGETGVRPLPALKENVKRVMFYC | 988 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6480366 | 6489147 | + | Tan0009358.1 | Tan10g0779 | 765573 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g0779 | 988 | Pfam | Mid domain of argonaute | 535 | 612 | IPR032473 | - | |
Tan10g0779 | 988 | CDD | Piwi_ago-like | 496 | 946 | IPR045246 | - | |
Tan10g0779 | 988 | Pfam | N-terminal domain of argonaute | 142 | 276 | IPR032474 | - | |
Tan10g0779 | 988 | ProSiteProfiles | PAZ domain profile. | 339 | 452 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Tan10g0779 | 988 | Gene3D | - | 695 | 988 | IPR036397 | GO:0003676(InterPro) | |
Tan10g0779 | 988 | Gene3D | paz domain | 331 | 456 | - | - | |
Tan10g0779 | 988 | MobiDBLite | consensus disorder prediction | 19 | 54 | - | - | |
Tan10g0779 | 988 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 133 | 953 | - | GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER) | |
Tan10g0779 | 988 | SUPERFAMILY | Ribonuclease H-like | 614 | 947 | IPR012337 | - | |
Tan10g0779 | 988 | Gene3D | - | 516 | 689 | - | - | |
Tan10g0779 | 988 | SMART | Piwi_a_2 | 626 | 947 | IPR003165 | GO:0003676(InterPro) | |
Tan10g0779 | 988 | FunFam | Protein argonaute-2 | 331 | 457 | - | - | |
Tan10g0779 | 988 | CDD | PAZ_argonaute_like | 337 | 451 | - | - | |
Tan10g0779 | 988 | SMART | DUF1785_2 | 285 | 337 | IPR014811 | - | |
Tan10g0779 | 988 | Pfam | Piwi domain | 627 | 946 | IPR003165 | GO:0003676(InterPro) | |
Tan10g0779 | 988 | FunFam | protein argonaute 10-like | 695 | 988 | - | - | |
Tan10g0779 | 988 | ProSiteProfiles | Piwi domain profile. | 626 | 947 | IPR003165 | GO:0003676(InterPro) | |
Tan10g0779 | 988 | FunFam | Argonaute 10 | 516 | 689 | - | - | |
Tan10g0779 | 988 | SMART | PAZ_2_a_3 | 342 | 474 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Tan10g0779 | 988 | Pfam | Argonaute linker 1 domain | 286 | 336 | IPR014811 | - | |
Tan10g0779 | 988 | Pfam | Argonaute linker 2 domain | 478 | 524 | IPR032472 | - | |
Tan10g0779 | 988 | SUPERFAMILY | PAZ domain | 332 | 492 | IPR036085 | GO:0005515(InterPro) | |
Tan10g0779 | 988 | MobiDBLite | consensus disorder prediction | 19 | 91 | - | - | |
Tan10g0779 | 988 | MobiDBLite | consensus disorder prediction | 951 | 970 | - | - | |
Tan10g0779 | 988 | Pfam | PAZ domain | 364 | 468 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g3353 | Tan-Chr5:85330171 | Tan10g0779 | Tan-Chr10:6480366 | 0.00E+00 | dispersed | |
Tan08g1153 | Tan-Chr8:25484847 | Tan10g0779 | Tan-Chr10:6480366 | 1.00E-304 | dispersed | |
Tan09g1341 | Tan-Chr9:65709431 | Tan10g0779 | Tan-Chr10:6480366 | 0.00E+00 | dispersed | |
Tan09g1342 | Tan-Chr9:65709431 | Tan10g0779 | Tan-Chr10:6480366 | 0.00E+00 | dispersed | |
Tan10g0779 | Tan-Chr10:6480366 | Tan10g0780 | Tan-Chr10:6480366 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g0779 | K11593 | - | csv:101221352 | 1910.58 |