Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0779 ATGCCCGTACGGCAAATGAAAGAGAGCTCCGAGCAGCACCTTGTAATCAAAACCCACTTTCAGAACACTGTTCAAAAACCTCCAAAATCAACCCAAAATGGCAAAGGCCCGCCGAATCTGGAACACCAAAACATCAAATCTCGAAACCCATCTTCTCCTCCGAGCAAAAACAGGGGCCGGAGAAGGAGCAGAGGCGGCCGGAAATCCGACCAGGGAGAAGTCTTTATGAGGCCCAGTTCTCGGCCCTGCACGGTGGCGCGCAAACCTGACTCACCGGAGATTACCGCCGGAGCTCTAGTGGCGAGTACTAATCCTAATCGTAATCCAAATGGTGCAAACATTTGTGGGATGGAAATGGGTTTTCGAAATTCAAGCAAGTCTGTGAGTTTTGCGCCAAGGCCTGGATTCGGACAAGTTGGGACAAAGTGTATTGTAAAAGCAAACCATTTCTTTGCAGAGTTACCGGACAAAGATTTGAATCAATATGATGTTACAATTACTCCTGAAGTGGCATCAAGAACTGTGAACAGAGCTATCATGGCTGAATTGGTGAGATTATACAGAGAATCTGATCTGGGAAAAAGATTACCAGCTTATGATGGCAGAAAGAGTCTGTATACAGCCGGTGAGCTTCCTTTTGGTTGGAAAGAGTTTAACATCAAGCTTGTGGATGAAGAAGATGGAGTCAGTGGTCCCAAGAGGGAGAGGGAATATAAAGTGGTTATTAAGTTTGTTGCTCGTGCAAATTTACACCATTTGGGTCAGTTTCTTGCGGGTAAGCGTGCCGATGCTCCACAAGAAGCTCTTCAAATACTGGACATTGTATTGAGAGAGCTGTCATCCAAAAGGTACTGTCCTATCGGGAGATCCTTCTTTTCTCCTGATATTAGATTGCCTCAACGGCTCGGTGATGGGCTAGAATCATGGTGTGGTTTTTACCAGAGTATAAGACCTACTCAAATGGGACTATCTCTGAACATCGATATGGCTTCAGCTGCATTTATCGAGCCTCTCCCTGTCCTTGAGTTTGTTGCTCAGCTTCTAGGGAAAGATGTTTTGTCCCGACCGTTGTCTGATTCCGATCGCGTAAAGATAAAAAAGGCTCTTAGAGGGGTGAAAGTTGAAGTAACGCACCGGGGTAATGTAAGGCGGAAGTATCGGGTTTCAGGTCTGACATCACAGCCTACAAGAGAACTAGTGTTTCCTGTTGATGACAACTCGACCATGAAGTCAGTTGTTGAATACTTCCAAGAGATGTATGGCTTCACCATTCAACACACGCACCTCCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGCAAATTATTTACCAATGGAGGCATGTAAAATTGTAGGGGGACAAAGATATACAAAGAGATTGAATGAGAAGCAAATAACTGCACTTCTAAAAGTCACATGTCAAAGACCTAGGGATCGAGAAAATGACATTTTGCAGACTGTTCAACACAATGCCTATGACAATGATCCTTATGCAAAGGAGTTTGGGATTAAAATCAGTGAAAAGCTGGCTTCTGTTGAAGCTAGAATTCTTCCTCCTCCATGGCTGAAATATCATGATACTGGAAAAGAGAAGGATTGCTTGCCTCAAGTGGGTCAATGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAATCGGTGGGCATGTATCAACTTCTCAAGGAGCGTGCAAGAGAGCGTTGCTCGTGGATTTTGTTCTGAACTTGCTCAAATGTGTCAAGTGTCTGGAATGGAATTCAATCCAGAACCAGTTATTCCAATATACAATGCTAGGCCAGAACAGGTAGAGAAATCTTTGAAGCATGTTTATCATGCTTCCATGAACAAGACTAAAGGAAAAGAGTTAGAGCTACTATTAGCTATTTTACCTGACAATAATGGGTCGCTTTACGGTGATCTTAAGCGAATTTGTGAAACTGATCTTGGTTTAATATCACAATGCTGTCTTACCAAACACGTGTTCAAGATTAGTAAGCAGTACCTCGCTAATGTGTCACTGAAGATCAATGTCAAGATGGGTGGTAGAAACACTGTTCTTCTAGATGCTATCAGCTGCAGGATACCGCTTGTGAGTGACATACCAACGATAATTTTTGGAGCGGATGTGACCCATCCAGAGAACGGCGAAGATTCCAGCCCTTCAATAGCTGCTGTTGTAGCCTCTCAGGATTGGCCTGAGGTGACAAAATATGCTGGACTAGTATGTGCTCAGGCTCATAGACAAGAACTTATACAAGACTTGTACAAAACTTGGCAGGATCCTGTCCGTGGCACTGTTAGTGGTGGCATGATCAGGGATCTTCTGGTTTCCTTTAGGAGAGCAACAGGGCAGAAGCCTCTAAGAATAATATTTTACAGGGATGGCGTAAGCGAAGGACAATTCTATCAAGTATTACTTTACGAGTTGGATGCAATCAGGAAGGCATGTGCTTCTTTAGAACCGAATTACCAACCACCCGTAACGTTCATTGTTGTACAAAAGCGACACCACACCCGATTGTTTGCCAACAATTATAGAGACAGAAGTAGCACAGACAAGAGTGGAAACATTTTACCTGGCACCGTAGTCGACTCCAAAATATGCCATCCAACAGAATTTGATTTCTATCTCTGTAGCCATGCTGGAATTCAGGGGACAAGTCGGCCAGCACACTACCATGTTCTTTGGGATGAAAACAATTTTACTGCTGATGGAATTCAGTCGTTAACGAACAACCTTTGCTACACATATGCAAGGTGTACACGCTCAGTTTCTGTCGTTCCTCCAGCATACTATGCGCATTTAGCAGCATTCCGAGCTCGATTCTACATGGAACCAGAGATGCAGGAGAATGGGTCAGGTGGTCGTTCGGCCAAGAGTACACGTGCTACTGGAGAGACTGGGGTTCGTCCTTTGCCAGCTCTGAAGGAAAATGTGAAGAGAGTAATGTTTTACTGTTAG 2967 44.02 MPVRQMKESSEQHLVIKTHFQNTVQKPPKSTQNGKGPPNLEHQNIKSRNPSSPPSKNRGRRRSRGGRKSDQGEVFMRPSSRPCTVARKPDSPEITAGALVASTNPNRNPNGANICGMEMGFRNSSKSVSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVASRTVNRAIMAELVRLYRESDLGKRLPAYDGRKSLYTAGELPFGWKEFNIKLVDEEDGVSGPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRYCPIGRSFFSPDIRLPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVLEFVAQLLGKDVLSRPLSDSDRVKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVGGQRYTKRLNEKQITALLKVTCQRPRDRENDILQTVQHNAYDNDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQESVARGFCSELAQMCQVSGMEFNPEPVIPIYNARPEQVEKSLKHVYHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRRATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMQENGSGGRSAKSTRATGETGVRPLPALKENVKRVMFYC 988
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6480366 6489147 + Tan0009358.1 Tan10g0779 765573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0779 988 Pfam Mid domain of argonaute 535 612 IPR032473 -
Tan10g0779 988 CDD Piwi_ago-like 496 946 IPR045246 -
Tan10g0779 988 Pfam N-terminal domain of argonaute 142 276 IPR032474 -
Tan10g0779 988 ProSiteProfiles PAZ domain profile. 339 452 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Tan10g0779 988 Gene3D - 695 988 IPR036397 GO:0003676(InterPro)
Tan10g0779 988 Gene3D paz domain 331 456 - -
Tan10g0779 988 MobiDBLite consensus disorder prediction 19 54 - -
Tan10g0779 988 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 133 953 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
Tan10g0779 988 SUPERFAMILY Ribonuclease H-like 614 947 IPR012337 -
Tan10g0779 988 Gene3D - 516 689 - -
Tan10g0779 988 SMART Piwi_a_2 626 947 IPR003165 GO:0003676(InterPro)
Tan10g0779 988 FunFam Protein argonaute-2 331 457 - -
Tan10g0779 988 CDD PAZ_argonaute_like 337 451 - -
Tan10g0779 988 SMART DUF1785_2 285 337 IPR014811 -
Tan10g0779 988 Pfam Piwi domain 627 946 IPR003165 GO:0003676(InterPro)
Tan10g0779 988 FunFam protein argonaute 10-like 695 988 - -
Tan10g0779 988 ProSiteProfiles Piwi domain profile. 626 947 IPR003165 GO:0003676(InterPro)
Tan10g0779 988 FunFam Argonaute 10 516 689 - -
Tan10g0779 988 SMART PAZ_2_a_3 342 474 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Tan10g0779 988 Pfam Argonaute linker 1 domain 286 336 IPR014811 -
Tan10g0779 988 Pfam Argonaute linker 2 domain 478 524 IPR032472 -
Tan10g0779 988 SUPERFAMILY PAZ domain 332 492 IPR036085 GO:0005515(InterPro)
Tan10g0779 988 MobiDBLite consensus disorder prediction 19 91 - -
Tan10g0779 988 MobiDBLite consensus disorder prediction 951 970 - -
Tan10g0779 988 Pfam PAZ domain 364 468 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3353 Tan-Chr5:85330171 Tan10g0779 Tan-Chr10:6480366 0.00E+00 dispersed
Tan08g1153 Tan-Chr8:25484847 Tan10g0779 Tan-Chr10:6480366 1.00E-304 dispersed
Tan09g1341 Tan-Chr9:65709431 Tan10g0779 Tan-Chr10:6480366 0.00E+00 dispersed
Tan09g1342 Tan-Chr9:65709431 Tan10g0779 Tan-Chr10:6480366 0.00E+00 dispersed
Tan10g0779 Tan-Chr10:6480366 Tan10g0780 Tan-Chr10:6480366 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0779 K11593 - csv:101221352 1910.58