Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g0798 | ATGAAAACCTCAAACTTCCTTCTCCCAAAATCTCTCCTCATCATCTCCATTCTCATCCTCCTCCCTAAACCTTCCCTTCAAGCATCTCGGCCGCCATCGCCGTCACCGTCACCACCACCGTCATTTCTCCCGAACCCGAGACTCCTCAAGGCCTACACCGCTCTCCAAGCTTGGAAACACGCCATCACCGCTGACCCGACCAACTTCACCGCCGACTGGTACGGCCCCAATGTCTGCAACTACTCCGGTGTCTTCTGCGCCCCCGCCCCCGATGACCCCTACATTCTCACTGTCGCCGGGATCGACCTCAACCATGCCAACCTCTCGGGCACCCTGCCCGATGACCTCGGCCTCCTGACCGACCTTGCCCTGTTCCACATCAACTCCAATCGCTTCTGTGGCACCATCCCTAACTCCTTCCGGTGCCTCACTCTCCTCTTTGAGCTTGATCTCAGCAACAATGACTTCTCAGGCGAGTTCCCCTCTGTAATTCTCTCTCTCCCATCTCTCAAATTCCTCGACATTCGATTCAACAAATTCCATGGCGATCTCCCTTCCCCCCTGTTTGACATGAAACTCGATGCTCTGTTCATCAACAACAACGATTTCAAATTCTCCCTGCCGGAAAACATCGGCAATTCCCCTGTTTCTGTTCTCGTTTTTGCTAATAATAACATCAATGGATGCCTCCCCTCGAGTTTGTCGAAAATGAACAGAACACTCAATGAAATTATAATCACGAATAGTGGGTTGAATGGGTGTTTACCGCCGGAAATTGGATCGTTAAGCAATCTCACCGTCTTTGATGTCAGTGACAACAATCTCTTCGGGCCGTTGCCTGAGACGATGACCGGAATGAAGAAATTGGAACAGTTAAACGTCGCACACAACCAATTATCCGGCGAGATTCCGGCGAGTATCTGCTCGTTGCCGAAATTGCAGAACTTCACTTACTCGTATAATTTCTTCTGCAGTGAGCCGTCGGTGTGCCTGAAACTTCAGGCCAGTGATGACCGGAAAAATTGCTTGCCAGAAAGGCCATTGCAACGTTCGCCGGAGGAATGTAAAGCTTTCTACTCTTACCCTGTTGATTGCGGCGTCTTTGGCTGTACTCGTCGGCCGCCACCGCCGCCTCCGCCTCCACCTCCACCTCCACCACCACCGCCGCCGCCATATTATTAG | 1182 | 52.03 | MKTSNFLLPKSLLIISILILLPKPSLQASRPPSPSPSPPPSFLPNPRLLKAYTALQAWKHAITADPTNFTADWYGPNVCNYSGVFCAPAPDDPYILTVAGIDLNHANLSGTLPDDLGLLTDLALFHINSNRFCGTIPNSFRCLTLLFELDLSNNDFSGEFPSVILSLPSLKFLDIRFNKFHGDLPSPLFDMKLDALFINNNDFKFSLPENIGNSPVSVLVFANNNINGCLPSSLSKMNRTLNEIIITNSGLNGCLPPEIGSLSNLTVFDVSDNNLFGPLPETMTGMKKLEQLNVAHNQLSGEIPASICSLPKLQNFTYSYNFFCSEPSVCLKLQASDDRKNCLPERPLQRSPEECKAFYSYPVDCGVFGCTRRPPPPPPPPPPPPPPPPPPYY | 393 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6686244 | 6687560 | + | Tan0007036.1 | Tan10g0798 | 765592 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g0798 | 393 | Pfam | Leucine rich repeat N-terminal domain | 53 | 86 | IPR013210 | - | |
Tan10g0798 | 393 | Gene3D | Ribonuclease Inhibitor | 50 | 212 | IPR032675 | - | |
Tan10g0798 | 393 | SUPERFAMILY | L domain-like | 51 | 332 | - | - | |
Tan10g0798 | 393 | Gene3D | Ribonuclease Inhibitor | 213 | 334 | IPR032675 | - | |
Tan10g0798 | 393 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 40 | 389 | IPR051582 | - | |
Tan10g0798 | 393 | Pfam | Leucine Rich Repeat | 288 | 310 | IPR001611 | GO:0005515(InterPro) | |
Tan10g0798 | 393 | Pfam | Leucine Rich Repeat | 169 | 189 | IPR001611 | GO:0005515(InterPro) | |
Tan10g0798 | 393 | Pfam | Leucine Rich Repeat | 264 | 285 | IPR001611 | GO:0005515(InterPro) | |
Tan10g0798 | 393 | Pfam | Leucine Rich Repeat | 146 | 166 | IPR001611 | GO:0005515(InterPro) | |
Tan10g0798 | 393 | FunFam | Leucine-rich repeat extensin-like protein 1 | 52 | 213 | - | - | |
Tan10g0798 | 393 | MobiDBLite | consensus disorder prediction | 372 | 393 | - | - | |
Tan10g0798 | 393 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 237 | 326 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0208 | Tan-Chr2:1755214 | Tan10g0798 | Tan-Chr10:6686244 | 8.50E-43 | dispersed | |
Tan08g0179 | Tan-Chr8:1557380 | Tan10g0798 | Tan-Chr10:6686244 | 1.00E-30 | dispersed | |
Tan09g1193 | Tan-Chr9:64274014 | Tan10g0798 | Tan-Chr10:6686244 | 5.90E-28 | dispersed | |
Tan10g0798 | Tan-Chr10:6686244 | Tan09g1311 | Tan-Chr9:65422738 | 8.30E-32 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g0798 | - | - | - | 0.0 |