Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0800 ATGGCCACCTTGTTGCATTCTGAATCTCGGCGCTTATATTCTTGGTGGTGGGATAGCCATATCAGCCCCAAAAATTCAAAATGGCTACAGGAGAATCTTACAGACATGGATGCCAAAGTAAAAGCAATGATCAAACTCATTGAAGAAGATGCAGACTCCTTTGCAAGAAGAGCAGAAATGTACTATAAGAAACGCCCAGAGCTTATGAAACTAGTTGAGGAATTCTACCGAGCTTACCGTGCTTTAGCTGAAAGATATGACCATGCAACTGCAGAGCTTCGTCACGCACATAAAACCATGGCTCAAGCATTTGACAATCAAATGCCTCCTTTTATGTTTTCTGATGAGTCACCTTCAGGGTCTTCTATTTCTGAAGCTGAATCCCACACACCAGAAATCCACCTCCCGAATCGTCCACTGCATGACCAAGATGACTTGCACAAGGATTTGGGAGGTTTGTCATCCACGAATCAACATCCATTAAGAATGAAAGGAGATAATGCTGGGGAATCTAATTCTCGTGTAAGTAAAGGGGGTTTGAAACAGCTCAATGAGATGTTTGCATCAAGAAAAAATGTGCTAGAAAACTTAGAGGTTATTGAGGGAAGCATCGAACCACAATTAGCTTTTCATGAAGGTGAATTTGATGACCATAACTTGCAAAAAGTATCCCCTCAGTTATCGAGTAAAATTTATGACCTCAAATCTCAGGTCCTGTGTGAGTCAGGAAGTGATGAAAAATTGGATGCTGAACTTCAAAATTTAAGAAAAAGACTGAATCAGATGGAAGCTGACAAGGAAGCTTTCTTTCTTAAATACCAGAATTCTTTGGAAAAGTTGTCCAGCTTAGAGAAAGAACTTAGCTCTGCTCAGAAAGATGCCTGTGGACTTGATGAACGTGCAAGCAAAGCTGAAATTGAAATAAAAATATTGAAGGAAGCTCTTCTAGATCTGAAAGCAGAGAAGAATGCTGGCCTTTTACAATATAATCATTGTTTGCAAAAGATATCTAGCCTAGAAAAGCTATTATCTGTAGCCCAACAAGATGCTGAAGGACACAATGAGAGAGCTGCTAAGGCAGAAATTGAAGCTCAGAACCTCGAGCAACAACTTTCCAGATTAGCAGCCGAAAAGGAAGCCAGTCTTCTTCGGTATGAGCAATGCCTAAAGAAAATATCTGCTTTAGAGAATAAAATCTCTCTTTCTGAAGATTATGCAAGAATGCTTGATGAACAAATGAATAGTTCAGAGACTGAAGTCAAAGCACTGAAGAGAGCTCTTGATGAACTGAATGAGGAGAAGGAAATAGCATCTCGCCAGTATGAGCAGTGCTTGGAGAAGATTGCCAAAATGGAAAGTGAAATATCTCGTGCTCAAGATGATGCAAAACGTCTGAAAGGTGAACTTGTGATGGTTAATGCAAAACTGGAGACAACAGAAGAAAGGTGTGCTCATTTGGAGCAGTCGAACCATTCACTGCAGTTTGAGGCAGACAAACTTATACAGAAGATTGCTATTAAGGATCAAGAGCTTGCAGAAAAGCAAGATGAGTTGAAGAAACTTCAGAGTCTAATGAATGAGGAGCAGTCACGATTTGTACAAGTTGAAAACACTCTCCACACGTTGCAGAAGTTGCATTGTCAATCTCAGGAGGAGCAGAGAGCTCTAACCTTGGAGCTTAAAAATGGTCTCATGATGCTGAAGGATTTGGATATATGCAAACATGGTATGGAAGAAGAGCTTCAACGAGTTAAGGACGAAAACAAAATACTGAATAAACTGCATTTTTCTTCCAATACTTCAATGAAGAGTCTAGAGGATCAATTATCTGGCCTGAAGGAGATGAAAGAGAAGCTTGAAGAGGTTGTTGCCCAAAAAGAAGAGCAGAGCAACTTGCTTGTGAAAGAGATCCATCATTTGAGAGAAGAAATCAAGGGCTTGAGTGGAAGATACGAGGGCATAATAAGACAATTGGAGGCGGTAGGATTAGATCCTGACTCCTTTGAATCCTCTGTAAAGGAATTTCAAGCGGAGAATGCCAAGCTGAGGGAGGCCTGTGAAAAGGACAGGAACAAGATCGAAGCGCTTTATGAGAAACTCAGTTATATGGATGAACTTTCGAAGGAAAATTCCATTCTCAAGGTATCTCTTGCTGAATTGAATGCCAAATTGGAGAGGTTAAAGGAGAAAGCCAAGGAATCCCAGGAGTTTTCCCAATTTACCCAGGGAGAAAAAACTGCTCTTGTTGCAGAGAAATCTTCCTTGCTTTCACAGTTGCAGAGTGTGACTGAGAATATGTTGAAACTTTTAGAGAAGAACACATTGCTAGATGACTCCCTATCTGGTGCAAATAAAGAGCTTGAAGGTTTAAGGGCAAAATCGAAGGGCTTAGAAGAATGCTGCCAGTTGCTGAAGGATGAGAGGTCCAATCTTCTGAATGAAAGAGGCATGTTGGTGGCTCGGCTTGAAAACATTGAACTGAGACTCGGAAACCTGGAAAGAAGGTTTACAAATCTAGAAGAAAAATATTCTGATCTGGAAAATGATAAAGACTCTGCTTTACACCAAGTAGAAGAATTGAGGTTTTCCCTTCTCATGGAAGAACAAGAGCATACAAGTTACAAGCAGTCGACTGAGGCGAGACTTGCTGGTTTGGAGGACCATGTCCATACCCTACGAGAAGAAAGTAGAATGGGCAAGGAAGAAATTGAAGAACTGCTAGATAAGGCTGTAAACGCCCAGGTTGAAATCTACATCTTGCAGAGGTTTGTTGAGGATTTGGAAGAGAAAAATATTTCTTTGCTTATTGAATGTGAACAATATGAAGAGGCATCGAAGTTATCAGATAAACTTATTGCTGAGTTGGAAGGCGAAAATCTTGAGCAACAAGTTGAAGTAGAGTTTATGTACAATGAAATCGATAAGTTAAGAGCAGGGATCCGTAAGGTATTAATGGCTCTTCAAATTGATCAAGATTATGGGCAGGGAAATATGAAAGAAGAGAGAATTCTGATAGGGGATATCTTGACCAGAATTGAGAATTTGAAAACTTCCGTGTTCAAAAACAAAGACAAGAAGCAGCAACTGCTAGTTCAGAACTCGGTTTTATTAACTCTTCTCAAGCAACTGAGTTTAGAGAGTGAAGAACTTCTGTCAGAGAAAGAGAACATTATGCAGGAGTTAAAGATCATGAAAGGCCAACTAGCAATGCATGAAGATGACAAACATGAGCTTCTTAAGACGAAAAACCAGTTGATGATGCAAGTTAGCCAGTGGGAGCAACATGAGCTACTGCTGAAGGTTGAGATTGAAACTCTAAATGAGAAGCTAATAAATCTTCAAGGGGCCTGCCTTATGCTGGAAAAGGAAAATTATAATGTTGCTGAAGAAAAGAAATCTTTGCTCAAGAAAATTTTGGACCTTGAAGAGGACAAAAATATTATTCAACAAGAGCAGCACAATTTAATCATCCAGGAAGTGATTGCTTTCAATATCCTATCGTTGATTTTTGAGAGTTTCAAAACTGAGAAATTATTGGAAACGGAAAAGCTTGTTCAAGACATCTACCGTCTCCAAGTGGTTAATTCTGATACAAGGGAAGAAGTTGAAAAGTTGGCAGAGAAATTTCAGTTGAAGGAAGTGGAAAATCTGCGTTTAAATGGATCAGTAGAGAAATTGGCCAAGGAGCTAGATGAAGCAAAAGACTTGAATGATCAACTTAACTATCGAATTCTACTTGGAAACGATTTTCTGAGGCTGAAGGCTCAAGAGCTTTCAGAAACAGAAGAAGAGCTTAAAACTTCACAAGACTTCAACATGAAATTGTCTGGTACTGTTGAGGAGCTCAAGATGGAAGGTAAAGAAACAATGTTGATTAGACACAGTCTAGAGAATGAGAATCTTGAGCTTTCTGAAAAGTGCTTAAGCCAGGAGAATGAGATGCAATGCCTCTGTGAAGTGAATGAAAATTTAAAATCCGAAGTAGATTTTTTGAACGAGGAGATTGAGAAATGCAAAATTAGAGAGGAATGTCTAAATTTAGAACTACAGGAGAGAAGAGATGAGTTTGAGCTTTGGGAGGCTGAAGCCACAACATTTTACTTCGATCTTCAAATCTCATCGATCCGGGAGGTTTTATATGAACACAAGGTTCATGAACTTGCACAGGCTTGTGAAAATGCTGGGGATGAGAATGCTGCAAAAACTATGGAGATTGAACAACTCAGAGAAAGAGTTAGTTCCCTGGAAACTGAAATTGGAGAAATGGAAGCACAGCTGTCTGCATATAAGCCTGCCATAGCTTCTCTGAGGCAGGATGTAGAATCACTCAAGCACATTGTTCTTCCTCAGGCTAGGGATATCTGTAGAGGTTTTATAGGAGAAGAGGATGAGGAAACCACAATTCATGTTCATCACAGTAGCTGTTATGTCCACAAAGATGAGATACTGGATTTGCAGAAGATTGGGGCCATGATAAAAGCAGTTGAGAAGGCTGTGATCGAAGAAAAGGAAAAACTCAACAAAGAAGCTGCTGACAAACATGTCAAAGACTTCAAATCAGAAAGAACCTCGCATCAAAAAGCAACAACCAAGGAAGGGAAGGATTTTAGGGATGGAATTACCGATAAACTAAAGGCAAGAAAGAACAAACCTGACAATGGAATATTGATGAAAGATATTCCACTGGATCATGTATCAGATAGTTCTTTCCAGAGAAGAAGCAAAAGGGAAAGTAGTGAGACCAATGATCAGATGCTCAAGTTGTGGGAAACTGCTGAGCAGGATTGTGACCAGAGTTTGATTGATAGCACACCACAAAGCCCGTCAGACCTGCAAATTGAGTGTCCGCAGTTGGAAATTGTAGAACATAAGAGTCCAGACTGTTCTTCAGAACTGCAAGTAGAGAAGGAGTTGAGCATTGATAGATTGGAGCTATCACCTAGCATTAGAGAACGAATTCGACGAGGCCGAAAAGGAAAGATTTTGGAGAGACTTGATTCAGATGTTGTTCAGTTGACAGGTCTTCTAACAAGCGTTCAAGATTTGAAAAAGAGAATGGAAGTGAACACCCTTGAAATGGCTAGAAACAATGAATATGACACGGTCGAGAAACATTTAAAAGAAGTTGAGGAAGCCATCTTCCAGCAAGTAAATATAAATGGTCAACTGAAGCAGAATTTGGAGCGCAGTCCCTCATCTTTCGAGCGAAGGCCATCGGTAGAAATCGAGGCAACTGGAAACATCCCCTTAAACAAACTAACAGAGCAGGCACAAAGAGGGTCCGAGAAGATAGGAAAACTACAGTTCGAGGTACAGAACATTCAGCGTGTTGTGCTGAAACTCGAATCTGAGAAGAAAAGAAAAGGGAAGAACAGGTTCTCCAAGAGTAAACCCGGTGTTATTCTGAGAGACTTCATCTACAGAAGTGGAAAGCATAGCGAAAGACGAAAGAAGCCGTGTTCTTGTGGATGTACAAGACCACCTACTCATGGAGACTGA 5499 40.21 MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTDMDAKVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATAELRHAHKTMAQAFDNQMPPFMFSDESPSGSSISEAESHTPEIHLPNRPLHDQDDLHKDLGGLSSTNQHPLRMKGDNAGESNSRVSKGGLKQLNEMFASRKNVLENLEVIEGSIEPQLAFHEGEFDDHNLQKVSPQLSSKIYDLKSQVLCESGSDEKLDAELQNLRKRLNQMEADKEAFFLKYQNSLEKLSSLEKELSSAQKDACGLDERASKAEIEIKILKEALLDLKAEKNAGLLQYNHCLQKISSLEKLLSVAQQDAEGHNERAAKAEIEAQNLEQQLSRLAAEKEASLLRYEQCLKKISALENKISLSEDYARMLDEQMNSSETEVKALKRALDELNEEKEIASRQYEQCLEKIAKMESEISRAQDDAKRLKGELVMVNAKLETTEERCAHLEQSNHSLQFEADKLIQKIAIKDQELAEKQDELKKLQSLMNEEQSRFVQVENTLHTLQKLHCQSQEEQRALTLELKNGLMMLKDLDICKHGMEEELQRVKDENKILNKLHFSSNTSMKSLEDQLSGLKEMKEKLEEVVAQKEEQSNLLVKEIHHLREEIKGLSGRYEGIIRQLEAVGLDPDSFESSVKEFQAENAKLREACEKDRNKIEALYEKLSYMDELSKENSILKVSLAELNAKLERLKEKAKESQEFSQFTQGEKTALVAEKSSLLSQLQSVTENMLKLLEKNTLLDDSLSGANKELEGLRAKSKGLEECCQLLKDERSNLLNERGMLVARLENIELRLGNLERRFTNLEEKYSDLENDKDSALHQVEELRFSLLMEEQEHTSYKQSTEARLAGLEDHVHTLREESRMGKEEIEELLDKAVNAQVEIYILQRFVEDLEEKNISLLIECEQYEEASKLSDKLIAELEGENLEQQVEVEFMYNEIDKLRAGIRKVLMALQIDQDYGQGNMKEERILIGDILTRIENLKTSVFKNKDKKQQLLVQNSVLLTLLKQLSLESEELLSEKENIMQELKIMKGQLAMHEDDKHELLKTKNQLMMQVSQWEQHELLLKVEIETLNEKLINLQGACLMLEKENYNVAEEKKSLLKKILDLEEDKNIIQQEQHNLIIQEVIAFNILSLIFESFKTEKLLETEKLVQDIYRLQVVNSDTREEVEKLAEKFQLKEVENLRLNGSVEKLAKELDEAKDLNDQLNYRILLGNDFLRLKAQELSETEEELKTSQDFNMKLSGTVEELKMEGKETMLIRHSLENENLELSEKCLSQENEMQCLCEVNENLKSEVDFLNEEIEKCKIREECLNLELQERRDEFELWEAEATTFYFDLQISSIREVLYEHKVHELAQACENAGDENAAKTMEIEQLRERVSSLETEIGEMEAQLSAYKPAIASLRQDVESLKHIVLPQARDICRGFIGEEDEETTIHVHHSSCYVHKDEILDLQKIGAMIKAVEKAVIEEKEKLNKEAADKHVKDFKSERTSHQKATTKEGKDFRDGITDKLKARKNKPDNGILMKDIPLDHVSDSSFQRRSKRESSETNDQMLKLWETAEQDCDQSLIDSTPQSPSDLQIECPQLEIVEHKSPDCSSELQVEKELSIDRLELSPSIRERIRRGRKGKILERLDSDVVQLTGLLTSVQDLKKRMEVNTLEMARNNEYDTVEKHLKEVEEAIFQQVNINGQLKQNLERSPSSFERRPSVEIEATGNIPLNKLTEQAQRGSEKIGKLQFEVQNIQRVVLKLESEKKRKGKNRFSKSKPGVILRDFIYRSGKHSERRKKPCSCGCTRPPTHGD 1832
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6704127 6712356 - Tan0010247.1 Tan10g0800 765594

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0800 1832 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779(InterPro)
Tan10g0800 1832 MobiDBLite consensus disorder prediction 131 149 - -
Tan10g0800 1832 PANTHER PROTEIN NETWORKED 4A 353 988 IPR051861 -
Tan10g0800 1832 Coils Coil 787 807 - -
Tan10g0800 1832 Coils Coil 1293 1348 - -
Tan10g0800 1832 Coils Coil 1248 1268 - -
Tan10g0800 1832 Coils Coil 875 909 - -
Tan10g0800 1832 Coils Coil 822 856 - -
Tan10g0800 1832 Coils Coil 952 972 - -
Tan10g0800 1832 Coils Coil 1131 1151 - -
Tan10g0800 1832 Coils Coil 336 384 - -
Tan10g0800 1832 Coils Coil 245 293 - -
Tan10g0800 1832 Coils Coil 406 538 - -
Tan10g0800 1832 MobiDBLite consensus disorder prediction 115 175 - -
Tan10g0800 1832 Coils Coil 1391 1425 - -
Tan10g0800 1832 Coils Coil 602 643 - -
Tan10g0800 1832 Coils Coil 567 594 - -
Tan10g0800 1832 Coils Coil 301 321 - -
Tan10g0800 1832 Coils Coil 1040 1074 - -
Tan10g0800 1832 Coils Coil 1195 1243 - -
Tan10g0800 1832 MobiDBLite consensus disorder prediction 1808 1832 - -
Tan10g0800 1832 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779(InterPro)
Tan10g0800 1832 Coils Coil 703 737 - -
Tan10g0800 1832 Gene3D - 1364 1447 - -
Tan10g0800 1832 Coils Coil 672 699 - -
Tan10g0800 1832 Coils Coil 1103 1123 - -
Tan10g0800 1832 Coils Coil 924 944 - -
Tan10g0800 1832 SUPERFAMILY Tropomyosin 335 520 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0800 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3853 Tan-Chr1:103283121 Tan10g0800 Tan-Chr10:6704127 3.20E-29 dispersed
Tan06g1011 Tan-Chr6:8923732 Tan10g0800 Tan-Chr10:6704127 1.30E-70 dispersed
Tan01g1483 Tan-Chr1:15054311 Tan10g0800 Tan-Chr10:6704127 5.80E-32 transposed
Tan10g0800 Tan-Chr10:6704127 Tan06g1010 Tan-Chr6:8923732 7.40E-75 wgd
Tan10g0800 Tan-Chr10:6704127 Tan07g2302 Tan-Chr7:74350660 6.20E-98 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g541 . . . . . Bpe14g01206 . . . . Cma06g01386 Cma14g01737 Car06g01195 Car14g01566 Sed02g1335 Cpe08g00276 Cpe03g01456 Bhi01g00773 Tan10g0800 Cmetu06g0678 . . . . . . . . . . . . . . . Lsi05g01629 . . Cme06g00583 Blo02g00526 Blo07g00230 Bda11g00592 Bda13g00105 . Bpe13g00592 Bma02g00829 . . Cmo06g01392 Cmo14g01776 . . . . . . . . . . . . . Cla05g00517 Cam05g0568 Cec05g0580 Cco05g0578 Clacu05g0565 Cmu05g0536 Cre05g0605 . Csa03g01300 Chy06g00554 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003822 2 2 2 1 2 1 2 1 1 1 1 1 4 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 1 2 44