Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0802 ATGGATTCGAAAGGGAATGATGTGGGGGGTATTACGAACCCAAAGGAGACAGAGAGTGAGGATAAAACTCTGAACTCAAAGGTTGCTGGTATGGGAAGCATTAGCAGCAAAGATATGATATTCAGAGCAGATAAGATTGATTTGAAAAACCTGGATATGCAGCTGGAAAAGCACTTGAGCCGTGTTTGGTCAAAGAGCGTTGGCGTTGAGACCCAAAAACCTAAGGAGGAGTGGGAGATTGATTTGTCTAAACTTGATATCCGATATGTTGTTGCTCATGGGACTTACGGAACAGTGTTCAGGGGTACATATGACAATCAAGATGTCGCAGTGAAGCTATTGGACTGGGGGGAGGATGGTCTTGCCACATCTGCTGAAACTGCTGCTTTGCGGGCATCATTTCGGCAAGAGGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTTACAAAATTTGTTGGAGCTTCAATGGGAGCTACAAATCTTAAGATTCCTTCAAAAGGCTCTTCAATGGATGGCGAAAACTCCCTTCCATCTAGGGCCTGCTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTAAAACAATACTTGATAAGGAACAGAAAAAGGAAACTTGCCTTTAAGGTTGTGATTCAATTAGCTTTGGATCTCTCGAGAGGGCTTAGCTATCTGCACTCCAAGAAGATTGTGCATCGTGATGTCAAAACTGAAAATATGTTGCTAGATGGTCATAGAACTCTCAAAATCGCTGATTTCGGGGTTGCCCGTGTTGAAGCTCAGAATCCAAGAGACATGACTGGGGAAACTGGTACCCTTGGATACATGGCCCCAGAGGTTCTCGATGGGAAGCCGTACAATAGAAGATGTGATGTCTATAGCTTTGGCATCTGCTTATGGGAAATTTACTGCTGTGATATGCCTTACCCTGATCTTAGTTTTGCTGACGTGTCATCTGCGGTTGTTCGACAGAATCTGCGACCCGATATCCCGAAATGCTGTCCAAGTTCTCTGGCTAATGTGATGAAGAAATGCTGGGATGGAAACCCATCTAAACGCCCTGAAATGGGTGAGGTTGTCAAAATGTTGGAAGCCATTGATACAAGTAAAGGAGGTGGGATGGTTTCTGAAGACGAAATCCCTAGCTGCTTCTGTTTCGGCCTGCCCCGCGGTCCGTGA 1179 45.21 MDSKGNDVGGITNPKETESEDKTLNSKVAGMGSISSKDMIFRADKIDLKNLDMQLEKHLSRVWSKSVGVETQKPKEEWEIDLSKLDIRYVVAHGTYGTVFRGTYDNQDVAVKLLDWGEDGLATSAETAALRASFRQEVAVWHKLDHPNVTKFVGASMGATNLKIPSKGSSMDGENSLPSRACCVVVEYLPGGTLKQYLIRNRKRKLAFKVVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDGHRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPDIPKCCPSSLANVMKKCWDGNPSKRPEMGEVVKMLEAIDTSKGGGMVSEDEIPSCFCFGLPRGP 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6778818 6782501 + Tan0003419.1 Tan10g0802 765596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0802 392 FunFam Serine/threonine-protein kinase HT1 189 374 - -
Tan10g0802 392 Gene3D Transferase(Phosphotransferase) domain 1 189 378 - -
Tan10g0802 392 SMART serkin_6 85 366 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0802 392 Pfam Protein tyrosine and serine/threonine kinase 89 363 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g0802 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g0802 392 SUPERFAMILY Protein kinase-like (PK-like) 64 363 IPR011009 -
Tan10g0802 392 Gene3D Phosphorylase Kinase; domain 1 74 166 - -
Tan10g0802 392 FunFam Kinase suppressor of Ras 1 74 168 - -
Tan10g0802 392 PRINTS Tyrosine kinase catalytic domain signature 186 199 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g0802 392 PRINTS Tyrosine kinase catalytic domain signature 224 242 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g0802 392 PRINTS Tyrosine kinase catalytic domain signature 290 312 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g0802 392 PRINTS Tyrosine kinase catalytic domain signature 334 356 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g0802 392 MobiDBLite consensus disorder prediction 1 25 - -
Tan10g0802 392 ProSiteProfiles Protein kinase domain profile. 85 366 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0802 392 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 54 364 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Tan10g0802 392 CDD STKc_MAP3K-like 91 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1007 Tan-Chr6:8848266 Tan10g0802 Tan-Chr10:6778818 3.50E-115 dispersed
Tan06g1008 Tan-Chr6:8848266 Tan10g0802 Tan-Chr10:6778818 3.50E-115 dispersed
Tan07g1352 Tan-Chr7:63201828 Tan10g0802 Tan-Chr10:6778818 3.60E-149 dispersed
Tan09g2234 Tan-Chr9:72305500 Tan10g0802 Tan-Chr10:6778818 8.80E-148 dispersed
Tan10g0802 Tan-Chr10:6778818 Tan05g0639 Tan-Chr5:4753182 1.20E-27 dispersed
Tan10g0802 Tan-Chr10:6778818 Tan10g0803 Tan-Chr10:6778818 5.90E-232 tandem
Tan10g0802 Tan-Chr10:6778818 Tan06g1006 Tan-Chr6:8848266 4.60E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68129 PF07714 PK_Tyr_Ser-Thr 6.00E-59 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0802 - - - 0.0