Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g0802 | ATGGATTCGAAAGGGAATGATGTGGGGGGTATTACGAACCCAAAGGAGACAGAGAGTGAGGATAAAACTCTGAACTCAAAGGTTGCTGGTATGGGAAGCATTAGCAGCAAAGATATGATATTCAGAGCAGATAAGATTGATTTGAAAAACCTGGATATGCAGCTGGAAAAGCACTTGAGCCGTGTTTGGTCAAAGAGCGTTGGCGTTGAGACCCAAAAACCTAAGGAGGAGTGGGAGATTGATTTGTCTAAACTTGATATCCGATATGTTGTTGCTCATGGGACTTACGGAACAGTGTTCAGGGGTACATATGACAATCAAGATGTCGCAGTGAAGCTATTGGACTGGGGGGAGGATGGTCTTGCCACATCTGCTGAAACTGCTGCTTTGCGGGCATCATTTCGGCAAGAGGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTTACAAAATTTGTTGGAGCTTCAATGGGAGCTACAAATCTTAAGATTCCTTCAAAAGGCTCTTCAATGGATGGCGAAAACTCCCTTCCATCTAGGGCCTGCTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTAAAACAATACTTGATAAGGAACAGAAAAAGGAAACTTGCCTTTAAGGTTGTGATTCAATTAGCTTTGGATCTCTCGAGAGGGCTTAGCTATCTGCACTCCAAGAAGATTGTGCATCGTGATGTCAAAACTGAAAATATGTTGCTAGATGGTCATAGAACTCTCAAAATCGCTGATTTCGGGGTTGCCCGTGTTGAAGCTCAGAATCCAAGAGACATGACTGGGGAAACTGGTACCCTTGGATACATGGCCCCAGAGGTTCTCGATGGGAAGCCGTACAATAGAAGATGTGATGTCTATAGCTTTGGCATCTGCTTATGGGAAATTTACTGCTGTGATATGCCTTACCCTGATCTTAGTTTTGCTGACGTGTCATCTGCGGTTGTTCGACAGAATCTGCGACCCGATATCCCGAAATGCTGTCCAAGTTCTCTGGCTAATGTGATGAAGAAATGCTGGGATGGAAACCCATCTAAACGCCCTGAAATGGGTGAGGTTGTCAAAATGTTGGAAGCCATTGATACAAGTAAAGGAGGTGGGATGGTTTCTGAAGACGAAATCCCTAGCTGCTTCTGTTTCGGCCTGCCCCGCGGTCCGTGA | 1179 | 45.21 | MDSKGNDVGGITNPKETESEDKTLNSKVAGMGSISSKDMIFRADKIDLKNLDMQLEKHLSRVWSKSVGVETQKPKEEWEIDLSKLDIRYVVAHGTYGTVFRGTYDNQDVAVKLLDWGEDGLATSAETAALRASFRQEVAVWHKLDHPNVTKFVGASMGATNLKIPSKGSSMDGENSLPSRACCVVVEYLPGGTLKQYLIRNRKRKLAFKVVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDGHRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPDIPKCCPSSLANVMKKCWDGNPSKRPEMGEVVKMLEAIDTSKGGGMVSEDEIPSCFCFGLPRGP | 392 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6778818 | 6782501 | + | Tan0003419.1 | Tan10g0802 | 765596 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g0802 | 392 | FunFam | Serine/threonine-protein kinase HT1 | 189 | 374 | - | - | |
Tan10g0802 | 392 | Gene3D | Transferase(Phosphotransferase) domain 1 | 189 | 378 | - | - | |
Tan10g0802 | 392 | SMART | serkin_6 | 85 | 366 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g0802 | 392 | Pfam | Protein tyrosine and serine/threonine kinase | 89 | 363 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan10g0802 | 392 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 230 | 242 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan10g0802 | 392 | SUPERFAMILY | Protein kinase-like (PK-like) | 64 | 363 | IPR011009 | - | |
Tan10g0802 | 392 | Gene3D | Phosphorylase Kinase; domain 1 | 74 | 166 | - | - | |
Tan10g0802 | 392 | FunFam | Kinase suppressor of Ras 1 | 74 | 168 | - | - | |
Tan10g0802 | 392 | PRINTS | Tyrosine kinase catalytic domain signature | 186 | 199 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan10g0802 | 392 | PRINTS | Tyrosine kinase catalytic domain signature | 224 | 242 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan10g0802 | 392 | PRINTS | Tyrosine kinase catalytic domain signature | 290 | 312 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan10g0802 | 392 | PRINTS | Tyrosine kinase catalytic domain signature | 334 | 356 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan10g0802 | 392 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Tan10g0802 | 392 | ProSiteProfiles | Protein kinase domain profile. | 85 | 366 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g0802 | 392 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 54 | 364 | IPR051681 | GO:0004674(PANTHER)|GO:0005886(PANTHER) | |
Tan10g0802 | 392 | CDD | STKc_MAP3K-like | 91 | 363 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g1007 | Tan-Chr6:8848266 | Tan10g0802 | Tan-Chr10:6778818 | 3.50E-115 | dispersed | |
Tan06g1008 | Tan-Chr6:8848266 | Tan10g0802 | Tan-Chr10:6778818 | 3.50E-115 | dispersed | |
Tan07g1352 | Tan-Chr7:63201828 | Tan10g0802 | Tan-Chr10:6778818 | 3.60E-149 | dispersed | |
Tan09g2234 | Tan-Chr9:72305500 | Tan10g0802 | Tan-Chr10:6778818 | 8.80E-148 | dispersed | |
Tan10g0802 | Tan-Chr10:6778818 | Tan05g0639 | Tan-Chr5:4753182 | 1.20E-27 | dispersed | |
Tan10g0802 | Tan-Chr10:6778818 | Tan10g0803 | Tan-Chr10:6778818 | 5.90E-232 | tandem | |
Tan10g0802 | Tan-Chr10:6778818 | Tan06g1006 | Tan-Chr6:8848266 | 4.60E-176 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68129 | PF07714 | PK_Tyr_Ser-Thr | 6.00E-59 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g0802 | - | - | - | 0.0 |