Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0851 ATGCAGATAATGGCCGAACCAATATACACTGTAGCTTCTGATAGTGAAACCACTGGGGAGGAAAAAACGACATCAACCTTTCTGGAGATTGCGATTGGAATTGATATTGGTACTTCACAATGTAGTATTGCAGTCTGGAATGGATCTCAGGTAGAGCTTCTTAAGAACACTAGAAATCAAAAAATTATGAGATCATATGTCACCTTTAAGGATGACAATCCTTCTGGAGGAGTTAGTAATGAGCTAAGCCATGAAGTTGACACCGACCCAGTTGTTCATGCAAGCAAGAGTCTTCCTTTTCTAGTGCAAACTTTGGACATTGGTGTTCGTCCATTTGTTGCAGCTTTGGTGAATAATGTTTGGAGATCCACCACTCCTGAGGAAGTTCTAGCTATCTTTCTTGTTGAACTGAAAATGATGGCTGAATATCAACTAAAGCGGCCAATTAGAAATGTTGTTTTGACAATTCCAGTTTCATTCAGCCGGTTCCAGCTTACTCGGGTTGAACGAGCTTGTGCAATGGCTGGCCTTCAAGTCAGATTGATGCCTGAACCAACAGCAGTAGCTTTATTATATGCCCAACAACAGCAGCAGGCAGTACACGAGAACATGGGCAGTGGAAGTGAAAAAATTGCCCTTATTTTCAACATGGGAGCTGGGTATTGTGATGTTGCAGTATCAGCTACGGGCGGAGGAGTGTCACAGATTAGAGCCCTGGCTGGAAGTCCTATTGGAGGTGAAGATCTACTTCAAAATACCATGAAGTATCTTTTGCCAAATTCTGAATCTATATTCTCACACCGCGGAATTGATGAGATAAGAAGGATGGGATTGCTCCGAGTTGCGACCCAGGATGCTATCCATAAGCTTTCATTCCAGTCTAGGGTTCAAATCGATGTCAACTTGGGAAATGGGTCAAAAATATGCAAGGTCCTAAGCCGGGACGAGTTTGTGATGGTGAACAGCAAGGTGTTTGAGAAATGTGAGAACCTTGTAAAGCAATGCTTACAAGATGCCAGAGTAGAAATTCAAGAAGTGAGCGATGTGGTAGTCATTGGTGGATGTTCATACATACCAAGAATCAGAGAACTTCTGATGGAAATAACTAAGAAGAAGGCACTTTATGAAGGAATGGATCCTCTAGAAGCTGCTGTTTCTGGGGCAGCCTTAGAAGGTGCAGTGGCATCAGGCATTGGCGATCCATTTGGAAATTTAGATCTTCTTAGCATCCAAGTGACGCCTCTCGCCATCGGAATTCGAGCTGATGGAAACAGCTTCATTCCAATTATTCCCAAGAACACCACAATGCCAGCACGCAAGGAGTTGGTTTTCACAACTGTTCAAGATAATCAAAGCGAGGCATTGATTGTGGTCTATGAAGGCGAAGAGACAAGAGCAGAAGAAAACCATCTGCTTGGCTATTTCAAGATCATTGGAATTCCACCAGCACCCAAAGGAGTCCCTGAAATTACTATTTGTATGGACATTGACTCTTCAAATATGCTTAGGGTTCTAGCTGGGGCAACACTCCCAGGTGCTCAACACCCTGCAACTCCTTTCATGGAAGTCAAGATGCCGACTGTTGACGATGGACATGGCTGGTGTGCAGAAGCTCTGCATGGAAAATATGGTGCTGCCATGGACTTGGTTACATTGCGGAAGAAAAGCTAG 1671 43.75 MQIMAEPIYTVASDSETTGEEKTTSTFLEIAIGIDIGTSQCSIAVWNGSQVELLKNTRNQKIMRSYVTFKDDNPSGGVSNELSHEVDTDPVVHASKSLPFLVQTLDIGVRPFVAALVNNVWRSTTPEEVLAIFLVELKMMAEYQLKRPIRNVVLTIPVSFSRFQLTRVERACAMAGLQVRLMPEPTAVALLYAQQQQQAVHENMGSGSEKIALIFNMGAGYCDVAVSATGGGVSQIRALAGSPIGGEDLLQNTMKYLLPNSESIFSHRGIDEIRRMGLLRVATQDAIHKLSFQSRVQIDVNLGNGSKICKVLSRDEFVMVNSKVFEKCENLVKQCLQDARVEIQEVSDVVVIGGCSYIPRIRELLMEITKKKALYEGMDPLEAAVSGAALEGAVASGIGDPFGNLDLLSIQVTPLAIGIRADGNSFIPIIPKNTTMPARKELVFTTVQDNQSEALIVVYEGEETRAEENHLLGYFKIIGIPPAPKGVPEITICMDIDSSNMLRVLAGATLPGAQHPATPFMEVKMPTVDDGHGWCAEALHGKYGAAMDLVTLRKKS 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7064577 7066837 - Tan0012939.1 Tan10g0851 765645

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0851 556 SUPERFAMILY Actin-like ATPase domain 208 394 IPR043129 -
Tan10g0851 556 FunFam Heat shock 70 kDa protein 8 246 327 - -
Tan10g0851 556 SUPERFAMILY Actin-like ATPase domain 30 194 IPR043129 -
Tan10g0851 556 Gene3D - 84 132 - -
Tan10g0851 556 CDD HSP70_NBD 32 393 - -
Tan10g0851 556 ProSitePatterns Heat shock hsp70 proteins family signature 3. 349 363 IPR018181 -
Tan10g0851 556 PANTHER HEAT SHOCK PROTEIN 70KDA 31 506 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Tan10g0851 556 PRINTS 70kDa heat shock protein signature 58 70 - -
Tan10g0851 556 PRINTS 70kDa heat shock protein signature 346 362 - -
Tan10g0851 556 PRINTS 70kDa heat shock protein signature 406 425 - -
Tan10g0851 556 PRINTS 70kDa heat shock protein signature 152 172 - -
Tan10g0851 556 PRINTS 70kDa heat shock protein signature 30 43 - -
Tan10g0851 556 PRINTS 70kDa heat shock protein signature 378 398 - -
Tan10g0851 556 PRINTS 70kDa heat shock protein signature 487 503 - -
Tan10g0851 556 Gene3D - 32 393 - -
Tan10g0851 556 Gene3D - 197 375 - -
Tan10g0851 556 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 408 507 IPR029047 -
Tan10g0851 556 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 404 516 IPR029047 -
Tan10g0851 556 Gene3D Actin; Chain A, domain 4 246 327 - -
Tan10g0851 556 FunFam Heat shock 70 kDa protein 8 401 516 - -
Tan10g0851 556 Pfam Hsp70 protein 31 509 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0851 K09489 - - csv:101206971 1001.12
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g0851 Tan-Chr10:7064577 Tan11g0735 Tan-Chr11:6275588 1.30E-70 dispersed
Tan10g0851 Tan-Chr10:7064577 Tan11g0741 Tan-Chr11:6314563 1.10E-69 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g487 . . . . . . . . . . . Cma14g01701 . Car14g01537 Sed12g0915 . Cpe03g01430 Bhi01g00820 Tan10g0851 Cmetu06g1845 . Hepe05g1544 . Lcy11g1539 . . . . . . . . . . . Lsi05g01597 Csa02g01145 . Cme06g00615 . Blo07g00214 Bda11g00572 . . Bpe13g00611 . Bma06g01551 . . Cmo14g01744 . . . . . . . . . . . . . Cla05g00551 Cam05g0599 Cec05g0610 Cco05g0607 Clacu05g0597 Cmu05g0567 Cre05g0635 . Csa03g01338 Chy06g00585 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010241 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 32