Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g0948 | ATGGGGTGTGTTTTTGGGCGAGAGGTATCTGCCAAGCCCGTCGAGGAGAGAGCGAAGGCCGAGAACGAAATTAGGGCTTCTGCGAAATCGGAGGTTGCTGAAGTTCGAGCTAATGTTGATGCTAATGTTGGCAATGGGGGAAGTAGGAAGGAGGTTGAAGATGATAGAGGTTCGAGGCCGAGGCGGCGATCGTCTAGGCCGAATCCGAGATTGAGTAATCCGCCGAAGCATGTGCATGGGGAGCAAGTCGCCGCCGGTTGGCCGTCTTGGCTCTCCGCCGTCGCCGGTGAGGCTATCAATGGATGGATTCCTCGCCGTGCTGATAGTTTCCAGAAGCTTGATAAAATTGGGCAAGGGACGTATAGTAATGTGTACAAAGCAAGGGATACATTGACAGGGAAGATTGTGGCTTTAAAGAAGGTTCGTTTTGACAATTTGGAGCCTGAGAGTGTGAAATTTATGGCCCGAGAAATTCTCATTCTGCGACGTTTGGATCATCCCAATGTTGTTAAACTCGAAGGTTTGGTGACATCCCGGATGTCGTGTAGTTTATATCTTGTTTTTGAATACATGGAGCATGATTTGGCTGGACTTGCTGCGAGCCCCGGGATCAAGTTTACGGAACCGCAGGTTAAATGTTACATGAACCAATTGTTATCAGGGCTTGAACACTGTCACAACCGTCACGTGCTGCATCGTGATATAAAGGGATCGAATCTTCTGATTGATAACGATGGGATCCTTAAGATAGCTGATTTTGGATTGGCTTCCGTCTTTGATCCTAACCACAAGCATCCAATGACAAGTAGGGTGGTTACTCTATGGTATCGACCTCCCGAACTTCTTCTTGGAGCTACTGATTATGGCGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTGGCTGAACTGTTAGCTGGAAAGCCTATCATGCCCGGTCGCACGGAGGTCGAGCAGCTACATAAGATATTCAAGTTATGTGGCTCTCCTACAGAAGATTACTGGAAAAAGTCGAGGTTGCCACATGCAACCATATTCAAGCCTCAACATTCATACAAGAGATGCATATCAGAGACATTTAAAGACTTCCCGCCGTCATCTCTGCCATTAATCGAGACACTTCTTGCAATCGACCCGGCTGAACGCTTAACTGCCACGGCTGCTTTACATAGTGAATTTTTCACTACCAAGCCATATGCTTGTGAGCCTTCCAGCCTACCCAAGTATCCTCCAAGTAAGGAAATGGATGCAAAACTGCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGCTGGCAGAAGCAATGCAGATGGGGTGAAGAAAACACGGTCACGTGATCGAGCTGTTCGGGCAATTCCTGCTCCAGAAGCCAATGCTGAGCTTCAAGCCAATCTTGATAGGCGGCGCCTCATAACACACGCAAATGCGAAGAGCAAGAGTGAAAAATTTCCTCCTCCACATCAAGACGGAGCACTCGGCTACCCTTTGGGATCTTCACATCACGTCGATCCAATCTACGATCCTCCTGACGTTCCATTTAGCACTATGAATTTCTCATATCCAAAAGCAAGCATCCAAACATGGTCTGGTCCGTTGATGGATCCAGCTGCTGTTGGTGCTCCAAGAAGGAAAAAACACACAGCAGGCCATTCATCAAAGTCATCCAAGGACTTGCATAAGGATAAAGATTCTGCTCGTATCTAA | 1701 | 47.74 | MGCVFGREVSAKPVEERAKAENEIRASAKSEVAEVRANVDANVGNGGSRKEVEDDRGSRPRRRSSRPNPRLSNPPKHVHGEQVAAGWPSWLSAVAGEAINGWIPRRADSFQKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPGIKFTEPQVKCYMNQLLSGLEHCHNRHVLHRDIKGSNLLIDNDGILKIADFGLASVFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTEDYWKKSRLPHATIFKPQHSYKRCISETFKDFPPSSLPLIETLLAIDPAERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNADGVKKTRSRDRAVRAIPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHVDPIYDPPDVPFSTMNFSYPKASIQTWSGPLMDPAAVGAPRRKKHTAGHSSKSSKDLHKDKDSARI | 566 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 8276276 | 8280472 | - | Tan0019064.1 | Tan10g0948 | 765742 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g0948 | 566 | SUPERFAMILY | Protein kinase-like (PK-like) | 103 | 399 | IPR011009 | - | |
Tan10g0948 | 566 | SMART | serkin_6 | 110 | 394 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g0948 | 566 | FunFam | probable serine/threonine-protein kinase At1g54610 | 193 | 434 | - | - | |
Tan10g0948 | 566 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 230 | 242 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan10g0948 | 566 | PANTHER | CELL DIVISION PROTEIN KINASE | 109 | 394 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Tan10g0948 | 566 | ProSitePatterns | Protein kinases ATP-binding region signature. | 116 | 139 | IPR017441 | GO:0005524(InterPro) | |
Tan10g0948 | 566 | Gene3D | Transferase(Phosphotransferase) domain 1 | 193 | 433 | - | - | |
Tan10g0948 | 566 | MobiDBLite | consensus disorder prediction | 10 | 30 | - | - | |
Tan10g0948 | 566 | MobiDBLite | consensus disorder prediction | 550 | 566 | - | - | |
Tan10g0948 | 566 | Gene3D | Phosphorylase Kinase; domain 1 | 97 | 192 | - | - | |
Tan10g0948 | 566 | FunFam | probable serine/threonine-protein kinase At1g54610 | 97 | 192 | - | - | |
Tan10g0948 | 566 | MobiDBLite | consensus disorder prediction | 474 | 495 | - | - | |
Tan10g0948 | 566 | ProSiteProfiles | Protein kinase domain profile. | 110 | 394 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g0948 | 566 | MobiDBLite | consensus disorder prediction | 524 | 566 | - | - | |
Tan10g0948 | 566 | MobiDBLite | consensus disorder prediction | 47 | 62 | - | - | |
Tan10g0948 | 566 | CDD | STKc_CDK9_like | 110 | 394 | - | - | |
Tan10g0948 | 566 | MobiDBLite | consensus disorder prediction | 1 | 82 | - | - | |
Tan10g0948 | 566 | Pfam | Protein kinase domain | 110 | 394 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1373 | Tan-Chr3:70215394 | Tan10g0948 | Tan-Chr10:8276276 | 2.50E-122 | dispersed | |
Tan05g0764 | Tan-Chr5:5558954 | Tan10g0948 | Tan-Chr10:8276276 | 3.10E-164 | dispersed | |
Tan05g0765 | Tan-Chr5:5567601 | Tan10g0948 | Tan-Chr10:8276276 | 7.60E-157 | dispersed | |
Tan05g3001 | Tan-Chr5:81954766 | Tan10g0948 | Tan-Chr10:8276276 | 5.90E-201 | dispersed | |
Tan09g0363 | Tan-Chr9:34041110 | Tan10g0948 | Tan-Chr10:8276276 | 2.80E-235 | dispersed | |
Tan09g0364 | Tan-Chr9:34041110 | Tan10g0948 | Tan-Chr10:8276276 | 2.20E-188 | dispersed | |
Tan10g0948 | Tan-Chr10:8276276 | Tan11g2116 | Tan-Chr11:50229547 | 3.30E-175 | dispersed | |
Tan10g0948 | Tan-Chr10:8276276 | Tan10g0949 | Tan-Chr10:8276276 | 2.80E-267 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68135 | PF00069 | Pkinase | 1.90E-69 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g0948 | K08819 | - | csv:101217952 | 1014.99 |