Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0966 ATGGGTGGGTGTTTTCCTTGTTTTGGATCCTCCGATGAAGACGGTAATGGCGTAAAGGAAGCTACTAAGAAGGATTCAGCTAAGGACGGCTCCACCGCTCAGTCTCACCAGAGAGTGAACTCAGATAAATCGAAGTCACGGAGTGTATCTGATTCTAAGAAGGAACCAACCGTTCAAAAGGATGGAACAACAGCACATATTGCAGCCCAAACATTTACATTTCGGGAACTCGCTACAGCTACAAAGAACTTCAGACCAGAATGCTTACTGGGAGAAGGGGGGTTTGGAAGGGTTTACAAAGGCCGCTTGGAGAGCACAGGACAGGTAGTGGCTGTGAAGCAGCTTGACCGTAATGGTCTTCAAGGAAATCGGGAATTTCTGGTGGAGGTTCTGATGCTTAGCCTGTTACATCACCCAAATCTTGTTAACTTGATAGGCTATTGTGCTGATGGGGATCAACGTCTTCTTGTTTATGAATTCATGCCATTGGGGTCGTTGGAAGATCATTTGCATGATCTTCCACCAGATAAGGAACCCTTGGATTGGAATACTAGAATGAAGATCGCAGCTGGTGCTGCAAAAGGATTGGAATATTTGCACGACAAAGCAAATCCCCCTGTTATATATCGAGACTTGAAATCATCTAATATTCTTCTTGACGAGGGCTACCACCCCAAACTATCAGATTTCGGTCTTGCAAAACTGGGTCCTGTTGGTGATAAGACTCATGTCTCGACGAGAGTAATGGGAACATATGGTTATTGTGCTCCAGAATATGCTATGACTGGTCAGCTCACTCTCAAGTCGGATGTATATAGTTTTGGAGTTGTCTTTCTTGAACTTATCACAGGGCGGAAGGCGATCGATAATACCAGAGGTCCAGGGGAGCATAATCTTGTAGCATGGGCTCGGCCACTTTTTAAGGATCGTCGGAAGTTCCCTAAGATGGCTGATCCGCTGCTGCAAGGCCGTTATCCCATGCGGGGACTTTATCAGGCATTGGCAGTTGCAGCAATGTGCTTGCAAGAGCAGGCTGCTACTAGACCTCTAATCGGGGATGTTGTTACTGCTTTGACGTATTTAGCTTCGCAAACTTATGATCCTAATACAGCTGCTTCTCAAAGCAATCGAATGAGTGGATCTACTCCACGAGCCCGAGATGAGCGGAGAGGCTTGCCCGATGGACTGGATAGCCCTGATGAGCGTGGCCGCGGACGTGGTTCCCCATCGAACTACAGAAACTCGCCTGATTACAGAAAAAAAGACCTCCATAGGGAATTGAGTTGTGGAGGTACAGAGCTGAGCAAAATAGACACGGGAGGCGGGTCTGGTCGAAAGTGGGGATTGGATGAGTTAGATCGACAAGAATCTCTGCGAGACAGTCCTGTATATACTGGGAGAGCAAGGGAAACACCAAGGAACCGCGACCTAAACAGAGAACGTGCAGTCGCAGAAGCAAAAGTTTGGGGTGAAAACTGGAGAGAGAGAAAGCGTGCGAACGCACAAGGCAGCTTCGACGGTTCACAAGAATGA 1533 47.55 MGGCFPCFGSSDEDGNGVKEATKKDSAKDGSTAQSHQRVNSDKSKSRSVSDSKKEPTVQKDGTTAHIAAQTFTFRELATATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNTAASQSNRMSGSTPRARDERRGLPDGLDSPDERGRGRGSPSNYRNSPDYRKKDLHRELSCGGTELSKIDTGGGSGRKWGLDELDRQESLRDSPVYTGRARETPRNRDLNRERAVAEAKVWGENWRERKRANAQGSFDGSQE 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8421793 8427651 - Tan0012127.1 Tan10g0966 765760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0966 510 Gene3D Transferase(Phosphotransferase) domain 1 161 382 - -
Tan10g0966 510 ProSiteProfiles Protein kinase domain profile. 84 361 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0966 510 MobiDBLite consensus disorder prediction 40 60 - -
Tan10g0966 510 PANTHER OS07G0668900 PROTEIN 34 378 - -
Tan10g0966 510 FunFam Serine/threonine-protein kinase PBS1 161 376 - -
Tan10g0966 510 MobiDBLite consensus disorder prediction 415 431 - -
Tan10g0966 510 CDD STKc_IRAK 90 359 - -
Tan10g0966 510 MobiDBLite consensus disorder prediction 369 479 - -
Tan10g0966 510 MobiDBLite consensus disorder prediction 16 31 - -
Tan10g0966 510 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524(InterPro)
Tan10g0966 510 Gene3D Phosphorylase Kinase; domain 1 54 160 - -
Tan10g0966 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g0966 510 SMART serkin_6 84 361 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0966 510 SUPERFAMILY Protein kinase-like (PK-like) 70 370 IPR011009 -
Tan10g0966 510 MobiDBLite consensus disorder prediction 382 407 - -
Tan10g0966 510 FunFam Serine/threonine-protein kinase PBS1 57 160 - -
Tan10g0966 510 Pfam Protein kinase domain 89 296 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0966 510 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1509 Tan-Chr2:64392830 Tan10g0966 Tan-Chr10:8421793 3.20E-113 dispersed
Tan02g1510 Tan-Chr2:64392830 Tan10g0966 Tan-Chr10:8421793 3.20E-113 dispersed
Tan04g0375 Tan-Chr4:3103382 Tan10g0966 Tan-Chr10:8421793 1.30E-161 dispersed
Tan05g0315 Tan-Chr5:2343838 Tan10g0966 Tan-Chr10:8421793 4.00E-117 dispersed
Tan06g1301 Tan-Chr6:15269416 Tan10g0966 Tan-Chr10:8421793 5.30E-136 dispersed
Tan06g1468 Tan-Chr6:19782002 Tan10g0966 Tan-Chr10:8421793 1.00E-185 dispersed
Tan08g1943 Tan-Chr8:71591498 Tan10g0966 Tan-Chr10:8421793 3.10E-154 dispersed
Tan09g0420 Tan-Chr9:40551742 Tan10g0966 Tan-Chr10:8421793 3.30E-101 dispersed
Tan09g1144 Tan-Chr9:63759171 Tan10g0966 Tan-Chr10:8421793 2.00E-88 dispersed
Tan10g0966 Tan-Chr10:8421793 Tan11g0532 Tan-Chr11:4619100 8.00E-96 dispersed
Tan10g0966 Tan-Chr10:8421793 Tan10g0967 Tan-Chr10:8421793 1.90E-222 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68137 PF00069 Pkinase 9.70E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0966 - - - 0.0