Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1051 ATGTCTACGGCCAGTTCGAGCTCTGTAAGGAAACCAAGTGAAGCTGTTCCCGACCAGTTTCCGGCGGGCCTTCGTGTTCTGGTTGTTGATGATGATCCGACCTGCCTTATGATCTTGGAGAAGATGCTTCGTATTTGTCGCTATGAAGTAACAAAATGTAGTCGAGCGGAGGATGCGCTGTCGCTTCTCAGACGGTACAAAAACGGGTTCGATGTCGTTTTGAGTGATGTCCACATGCCAGACATGGATGGATTCAAACTTCTGGAGTACATTGGACTGGAAATGGACTTGCCTGTGATCATGATGTCGGTGGACGATGGGAAAAATGTTGTCATGAAGGGAGTGACTCATGGTGCTTGTGACTATTTGATAAAACCTGTTCGAATTGAAGCGCTGAAGAACATATGGCAGCACGTTGTTCGCAAGCGGAAGAATGAATGGAAGGACTTGGAGCAATCTGGTGTGGAGGATGTAGATCGGCAGCAAAAAACAAATGAAGAAGCAGATTATTCATCATCTGCTAATGAAGGGAGTTGGAGGAACTCAAAGAGGAGGAAAGATGACGTAGAAGATGCCGAGGAGAGGGATGACTCATCAACCCTAAAGAAACCGAGGGTCGTTTGGTCCGTTGAGCTCCATCAGCAGTTCGTGGCTGCTGTTAATCAACTAGGAATTGATAAGGCTGTTCCCAAGAAGATTCTGGAGTTGATGAATGTTCCTGGACTCACCAGAGAAAATGTTGCCAGCCACCTTCAGAAATATCGCTTGTACCTGAGAAGACTAAGTGGAATGACACAGCACCAGAGTAATCTGAACAACACATTCATGAGTGCCCAAGATGCATTTGGTCCGTCATTGAACGGACTTGATCTTCAAACTCTCGCTGCTGCTGGTCAGCTCCAGCCTCAAAGCCTTGCTACGCTCCAAGCAGCTGGATTTGGTAGGTCTACAGCAAAATCGGGCATGCCTATGCCTCTTGTTGATCAAAGGAACCACATTTTTAGCTTTGAAAATCCAAAGTTGAGATTTGGTGATGGACAACAGCCACATTTGAACGGTAGTAAACCAATAAATCTACTTCACGGAATTCCAACAACAATGGAGCCAAAACAACTAGCTAATCTGCAGCATTCTGCACAATCTCATGGAAACATGACAATGCAAGTTAGCGCCCAAGGGGGCCAAACTAGCTCTCAACTAATGCAGACACCTCAACCACAAGCTAGACCACAGATCCTAAACGAAAGTACCGCAACTAGCGTGACAAGGCTTCCACCAACAATACAGCAGTCAATTTTGCCGAATGGAACTACCGGTGCGGTTTTGGCTAGGAATGAATTCGCCAATAATAGTAGAGGTGGAGGGTACAATCTAGTTTCACCAGCTTCAACAATGTTAAATTTTCCCATGAACCAAACTGCTGAACTGCCTGGTAACAGTTTTCCTCTTCAAAGTAACCCAGGAATGTCAAGTATTGTACCGAAGGGAAGATTTCCAGATGAGGTTAACTCAGACATTAAAGGATCTGACGGTTTTGTGCCAAGCTATGATATGTTTAGGGATCTGCATCCCCAGAAGCCAGATTGGGACTTGCAACATGTAGGTGTGACCTTCGATGCGTCTCATCAAGGTAGTCTTGACATTTCATCCTCAGCTTTTGCTCATCAAGGATATGCCTCTAGCCAACAAAATGGACAAAACAGGAACACATCTACGGCAGGCAAGGCCACGTTCTTGTTGGAAGAAGGAAGTGAGAATGGGAATGCACAAAGTATGGGTCAACAACTCAACCCTATTTTCGTTGACGGTTCAGTGAGAGTTAAAGCGGAAAGAGCTTCTGAAACTAGCAGTCAAACTGACCTTTTTTCTGAACACTTTGGTCAGGAGGACCTGATGAGTGCACTTCTTAAGCAGGTTAGATTGCAGTACCTTTGTATTTTGCTCAACTCCCCCCTCCCTCCGGTGTTCGTAAGATGGATCTCGGTAAGTTTACCGTGCTTATTACTAATAAATGTTGTAAATATTTTGTTTCACAGCAACAGGGAAGCATTACAACAGCTGAAAGTGAGTTGGAATGGGTATTTCATCATAATACTCCTGTTTAGAATGTTGCTCTAG 2118 44.9 MSTASSSSVRKPSEAVPDQFPAGLRVLVVDDDPTCLMILEKMLRICRYEVTKCSRAEDALSLLRRYKNGFDVVLSDVHMPDMDGFKLLEYIGLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGVEDVDRQQKTNEEADYSSSANEGSWRNSKRRKDDVEDAEERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGMTQHQSNLNNTFMSAQDAFGPSLNGLDLQTLAAAGQLQPQSLATLQAAGFGRSTAKSGMPMPLVDQRNHIFSFENPKLRFGDGQQPHLNGSKPINLLHGIPTTMEPKQLANLQHSAQSHGNMTMQVSAQGGQTSSQLMQTPQPQARPQILNESTATSVTRLPPTIQQSILPNGTTGAVLARNEFANNSRGGGYNLVSPASTMLNFPMNQTAELPGNSFPLQSNPGMSSIVPKGRFPDEVNSDIKGSDGFVPSYDMFRDLHPQKPDWDLQHVGVTFDASHQGSLDISSSAFAHQGYASSQQNGQNRNTSTAGKATFLLEEGSENGNAQSMGQQLNPIFVDGSVRVKAERASETSSQTDLFSEHFGQEDLMSALLKQVRLQYLCILLNSPLPPVFVRWISVSLPCLLLINVVNILFHSNREALQQLKVSWNGYFIIILLFRMLL 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9414877 9419326 + Tan0017519.2 Tan10g1051 765845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1051 705 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160(InterPro)
Tan10g1051 705 SUPERFAMILY Homeodomain-like 200 260 IPR009057 -
Tan10g1051 705 FunFam Two-component response regulator 24 161 - -
Tan10g1051 705 CDD REC_typeB_ARR-like 26 140 - -
Tan10g1051 705 SUPERFAMILY CheY-like 23 148 IPR011006 -
Tan10g1051 705 SMART REC_2 24 136 IPR001789 GO:0000160(InterPro)
Tan10g1051 705 Pfam Myb-like DNA-binding domain 205 255 IPR001005 -
Tan10g1051 705 PIRSF RR_ARR_type-B 3 642 IPR017053 GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro)
Tan10g1051 705 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 370 IPR045279 GO:0009736(InterPro)
Tan10g1051 705 MobiDBLite consensus disorder prediction 151 166 - -
Tan10g1051 705 Gene3D - 24 161 - -
Tan10g1051 705 Gene3D - 200 262 - -
Tan10g1051 705 MobiDBLite consensus disorder prediction 151 200 - -
Tan10g1051 705 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160(InterPro)
Tan10g1051 705 FunFam Two-component response regulator 199 262 - -
Tan10g1051 705 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 259 IPR017930 -
Tan10g1051 705 MobiDBLite consensus disorder prediction 179 200 - -
Tan10g1051 705 NCBIfam myb-like DNA-binding domain, SHAQKYF class 203 256 IPR006447 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2150 Tan-Chr2:90886131 Tan10g1051 Tan-Chr10:9414877 7.10E-80 dispersed
Tan06g2115 Tan-Chr6:70257542 Tan10g1051 Tan-Chr10:9414877 7.90E-40 dispersed
Tan06g2722 Tan-Chr6:79583258 Tan10g1051 Tan-Chr10:9414877 6.60E-215 dispersed
Tan10g1050 Tan-Chr10:9414877 Tan10g1051 Tan-Chr10:9414877 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28554 PF00072 Response_reg 1.20E-22 CL0304 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1051 K14491 - csv:101209013 1181.01