Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g1051 | ATGTCTACGGCCAGTTCGAGCTCTGTAAGGAAACCAAGTGAAGCTGTTCCCGACCAGTTTCCGGCGGGCCTTCGTGTTCTGGTTGTTGATGATGATCCGACCTGCCTTATGATCTTGGAGAAGATGCTTCGTATTTGTCGCTATGAAGTAACAAAATGTAGTCGAGCGGAGGATGCGCTGTCGCTTCTCAGACGGTACAAAAACGGGTTCGATGTCGTTTTGAGTGATGTCCACATGCCAGACATGGATGGATTCAAACTTCTGGAGTACATTGGACTGGAAATGGACTTGCCTGTGATCATGATGTCGGTGGACGATGGGAAAAATGTTGTCATGAAGGGAGTGACTCATGGTGCTTGTGACTATTTGATAAAACCTGTTCGAATTGAAGCGCTGAAGAACATATGGCAGCACGTTGTTCGCAAGCGGAAGAATGAATGGAAGGACTTGGAGCAATCTGGTGTGGAGGATGTAGATCGGCAGCAAAAAACAAATGAAGAAGCAGATTATTCATCATCTGCTAATGAAGGGAGTTGGAGGAACTCAAAGAGGAGGAAAGATGACGTAGAAGATGCCGAGGAGAGGGATGACTCATCAACCCTAAAGAAACCGAGGGTCGTTTGGTCCGTTGAGCTCCATCAGCAGTTCGTGGCTGCTGTTAATCAACTAGGAATTGATAAGGCTGTTCCCAAGAAGATTCTGGAGTTGATGAATGTTCCTGGACTCACCAGAGAAAATGTTGCCAGCCACCTTCAGAAATATCGCTTGTACCTGAGAAGACTAAGTGGAATGACACAGCACCAGAGTAATCTGAACAACACATTCATGAGTGCCCAAGATGCATTTGGTCCGTCATTGAACGGACTTGATCTTCAAACTCTCGCTGCTGCTGGTCAGCTCCAGCCTCAAAGCCTTGCTACGCTCCAAGCAGCTGGATTTGGTAGGTCTACAGCAAAATCGGGCATGCCTATGCCTCTTGTTGATCAAAGGAACCACATTTTTAGCTTTGAAAATCCAAAGTTGAGATTTGGTGATGGACAACAGCCACATTTGAACGGTAGTAAACCAATAAATCTACTTCACGGAATTCCAACAACAATGGAGCCAAAACAACTAGCTAATCTGCAGCATTCTGCACAATCTCATGGAAACATGACAATGCAAGTTAGCGCCCAAGGGGGCCAAACTAGCTCTCAACTAATGCAGACACCTCAACCACAAGCTAGACCACAGATCCTAAACGAAAGTACCGCAACTAGCGTGACAAGGCTTCCACCAACAATACAGCAGTCAATTTTGCCGAATGGAACTACCGGTGCGGTTTTGGCTAGGAATGAATTCGCCAATAATAGTAGAGGTGGAGGGTACAATCTAGTTTCACCAGCTTCAACAATGTTAAATTTTCCCATGAACCAAACTGCTGAACTGCCTGGTAACAGTTTTCCTCTTCAAAGTAACCCAGGAATGTCAAGTATTGTACCGAAGGGAAGATTTCCAGATGAGGTTAACTCAGACATTAAAGGATCTGACGGTTTTGTGCCAAGCTATGATATGTTTAGGGATCTGCATCCCCAGAAGCCAGATTGGGACTTGCAACATGTAGGTGTGACCTTCGATGCGTCTCATCAAGGTAGTCTTGACATTTCATCCTCAGCTTTTGCTCATCAAGGATATGCCTCTAGCCAACAAAATGGACAAAACAGGAACACATCTACGGCAGGCAAGGCCACGTTCTTGTTGGAAGAAGGAAGTGAGAATGGGAATGCACAAAGTATGGGTCAACAACTCAACCCTATTTTCGTTGACGGTTCAGTGAGAGTTAAAGCGGAAAGAGCTTCTGAAACTAGCAGTCAAACTGACCTTTTTTCTGAACACTTTGGTCAGGAGGACCTGATGAGTGCACTTCTTAAGCAGGTTAGATTGCAGTACCTTTGTATTTTGCTCAACTCCCCCCTCCCTCCGGTGTTCGTAAGATGGATCTCGGTAAGTTTACCGTGCTTATTACTAATAAATGTTGTAAATATTTTGTTTCACAGCAACAGGGAAGCATTACAACAGCTGAAAGTGAGTTGGAATGGGTATTTCATCATAATACTCCTGTTTAGAATGTTGCTCTAG | 2118 | 44.9 | MSTASSSSVRKPSEAVPDQFPAGLRVLVVDDDPTCLMILEKMLRICRYEVTKCSRAEDALSLLRRYKNGFDVVLSDVHMPDMDGFKLLEYIGLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGVEDVDRQQKTNEEADYSSSANEGSWRNSKRRKDDVEDAEERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGMTQHQSNLNNTFMSAQDAFGPSLNGLDLQTLAAAGQLQPQSLATLQAAGFGRSTAKSGMPMPLVDQRNHIFSFENPKLRFGDGQQPHLNGSKPINLLHGIPTTMEPKQLANLQHSAQSHGNMTMQVSAQGGQTSSQLMQTPQPQARPQILNESTATSVTRLPPTIQQSILPNGTTGAVLARNEFANNSRGGGYNLVSPASTMLNFPMNQTAELPGNSFPLQSNPGMSSIVPKGRFPDEVNSDIKGSDGFVPSYDMFRDLHPQKPDWDLQHVGVTFDASHQGSLDISSSAFAHQGYASSQQNGQNRNTSTAGKATFLLEEGSENGNAQSMGQQLNPIFVDGSVRVKAERASETSSQTDLFSEHFGQEDLMSALLKQVRLQYLCILLNSPLPPVFVRWISVSLPCLLLINVVNILFHSNREALQQLKVSWNGYFIIILLFRMLL | 705 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 9414877 | 9419326 | + | Tan0017519.2 | Tan10g1051 | 765845 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g1051 | 705 | Pfam | Response regulator receiver domain | 26 | 134 | IPR001789 | GO:0000160(InterPro) | |
Tan10g1051 | 705 | SUPERFAMILY | Homeodomain-like | 200 | 260 | IPR009057 | - | |
Tan10g1051 | 705 | FunFam | Two-component response regulator | 24 | 161 | - | - | |
Tan10g1051 | 705 | CDD | REC_typeB_ARR-like | 26 | 140 | - | - | |
Tan10g1051 | 705 | SUPERFAMILY | CheY-like | 23 | 148 | IPR011006 | - | |
Tan10g1051 | 705 | SMART | REC_2 | 24 | 136 | IPR001789 | GO:0000160(InterPro) | |
Tan10g1051 | 705 | Pfam | Myb-like DNA-binding domain | 205 | 255 | IPR001005 | - | |
Tan10g1051 | 705 | PIRSF | RR_ARR_type-B | 3 | 642 | IPR017053 | GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro) | |
Tan10g1051 | 705 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 19 | 370 | IPR045279 | GO:0009736(InterPro) | |
Tan10g1051 | 705 | MobiDBLite | consensus disorder prediction | 151 | 166 | - | - | |
Tan10g1051 | 705 | Gene3D | - | 24 | 161 | - | - | |
Tan10g1051 | 705 | Gene3D | - | 200 | 262 | - | - | |
Tan10g1051 | 705 | MobiDBLite | consensus disorder prediction | 151 | 200 | - | - | |
Tan10g1051 | 705 | ProSiteProfiles | Response regulatory domain profile. | 25 | 140 | IPR001789 | GO:0000160(InterPro) | |
Tan10g1051 | 705 | FunFam | Two-component response regulator | 199 | 262 | - | - | |
Tan10g1051 | 705 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 202 | 259 | IPR017930 | - | |
Tan10g1051 | 705 | MobiDBLite | consensus disorder prediction | 179 | 200 | - | - | |
Tan10g1051 | 705 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 203 | 256 | IPR006447 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2150 | Tan-Chr2:90886131 | Tan10g1051 | Tan-Chr10:9414877 | 7.10E-80 | dispersed | |
Tan06g2115 | Tan-Chr6:70257542 | Tan10g1051 | Tan-Chr10:9414877 | 7.90E-40 | dispersed | |
Tan06g2722 | Tan-Chr6:79583258 | Tan10g1051 | Tan-Chr10:9414877 | 6.60E-215 | dispersed | |
Tan10g1050 | Tan-Chr10:9414877 | Tan10g1051 | Tan-Chr10:9414877 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28554 | PF00072 | Response_reg | 1.20E-22 | CL0304 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g1051 | K14491 | - | csv:101209013 | 1181.01 |