Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1052 ATGGTCATTGCCGATCTGATCCTCCTCCTCATCTTCACGGCCATACCCTTTTCGATTTCTCAGCCAACTGACCAAGCTCCACCTCCGGCCGCCGATTCTTGCAATGGCATCTTCTTGTCCTACACTTTCAACCAAGGAACGAAGCTTCCACCGAATCTCACTGATCTCGCCCGTCAGCCGTACCGATTCGAGTCCACTCTTTCGATCCTCAACAATGGCCTTCAGGAGCTCAAGTCTTGGAGGGTTTTTGTGGGGTTTCAGCACGATGAGTTCTTGGTCTCGGCCTCTGGCGCCGTCCTCGCCGATGGGAATAGTGTTCCCGGAAACGTCGGCAATGGGACCATCTTTGCTGGGTTTCCGATGACCGACTTGAAGACGGCGATTGAAACTGCCGGAGACTTCACTCAGATGCAGGTTCAAGTCAAACTGCTTGGGACTCAATTTGGGGTTGCCCCTCCGAATAGTCCGATGCCTTCGAATATATCTCTTGCTAACGATGGATATCGCTGCCCCAGACCTACTCTACAAGGAAAGAGTGAGATGCACATCTGTTGCACACCTGATACAGACGTTAAAACAAACATCACAACCAGTGAAGAGTTCTTGCCTCGCCAAAATGGCGATCTAACGATCCTATATGATGTGACAAGAACATATGATTCAAGTTATTGGGCACAAGTCACAATCTCTAACCATAATCCACTCGGTCGTCTTGACTATTGGAAATTAAGCTGGGATTGGATGAGGGATGAGTTTATCTTTTCAATGAAAGGGGCTTATCCTTCTGTTGTCGATTCTACTGATTGCATTTTTGGTAGACAAGGCACTTATTATCGGGATTTAGACTTTTCCAATGTATTAAGTTGTGAAAGAAGGCCAACAATTATTGATTTGCCTCCAACTAAGGCCAACGACACCACTCTTGGGTTGATCCCTTTCTGCTGTCGAAATGGGACTATCTTGCCTTCTCATATGGACCCGAGCAAGTCGGTTTCTGCATTTCAGATGCAAGTTTTTAAAATGCCACCAGATCTCAACAGATCCCAGATTACACCACCTCAGAATTGGCAAATCAGTGGCGTTCTCAACCCCACATATAAATGTGGTGCTCCAGTGAGGGTAAGTCCTAGCGAATTCCCCGACGCAAGTGGTTTACCATTGAATTCGACTGCGGTAGCTAGCTGGCAGGTTGTTTGTAATATAACACATGTCAAGGATGACACACCAAAGTGCTGTGTTTCATTTTCGGCTTACTACAACGATTCTGTCGTCCCATGCAGAACGTGTGCTTGTGGTTGTTCGCGTAACTCTGACCGTACGTGTAATGCAACTTCTCCTGCAATGCTCCTCCCACCTGAAGCCCTTCTTGTTCCTTTTGAGAATAGGACTGCTCTGGCCGTTGCTTGGGCTGGTCTTAAACATTACCCAGTTCCTAACCCAATGCCTTGTGCGGATAACTGCGGTGTCAGTATCAATTGGCATTTATATACTGATTATAGAGACGGATGGAGTGCGAGGATCACTCTCTTCAACTGGGATGAAGTGAATTTTGCAGATTGGTTTGCTGCAGTTGAGATGAAGAAAGCAGCACCCGGTTTCCAGGCAATGTACTCGTTCAATGCAACCACCCTGGAATTGGATGGTGCCAATAATACTATCTTTATGCAGGGTCATCCTGGACTAAACTATCTCGTGGGTGAAACAGACGGAGTCAACCCGGGGAAGGATCCGAGGGTACCTGGAAAACAGCAATCTGTGATCTCATTTACAAAGAAGAACATACAAGTTCTTAACATGGCTGCAGGAGATGGGTTCCCCACAAAAGTGTTCTTCAATGGGGAAGAATGCCTACTTCCGAAAATATTCCCAGCTAACGACAGCCGAAGGAACTTAGCTTCGTTCGTTCCGAGCATCCTAATGCTACTATTTGTGTTCGCGTTTATTCAGCAATAG 1953 46.8 MVIADLILLLIFTAIPFSISQPTDQAPPPAADSCNGIFLSYTFNQGTKLPPNLTDLARQPYRFESTLSILNNGLQELKSWRVFVGFQHDEFLVSASGAVLADGNSVPGNVGNGTIFAGFPMTDLKTAIETAGDFTQMQVQVKLLGTQFGVAPPNSPMPSNISLANDGYRCPRPTLQGKSEMHICCTPDTDVKTNITTSEEFLPRQNGDLTILYDVTRTYDSSYWAQVTISNHNPLGRLDYWKLSWDWMRDEFIFSMKGAYPSVVDSTDCIFGRQGTYYRDLDFSNVLSCERRPTIIDLPPTKANDTTLGLIPFCCRNGTILPSHMDPSKSVSAFQMQVFKMPPDLNRSQITPPQNWQISGVLNPTYKCGAPVRVSPSEFPDASGLPLNSTAVASWQVVCNITHVKDDTPKCCVSFSAYYNDSVVPCRTCACGCSRNSDRTCNATSPAMLLPPEALLVPFENRTALAVAWAGLKHYPVPNPMPCADNCGVSINWHLYTDYRDGWSARITLFNWDEVNFADWFAAVEMKKAAPGFQAMYSFNATTLELDGANNTIFMQGHPGLNYLVGETDGVNPGKDPRVPGKQQSVISFTKKNIQVLNMAAGDGFPTKVFFNGEECLLPKIFPANDSRRNLASFVPSILMLLFVFAFIQQ 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9420233 9423808 - Tan0003801.1 Tan10g1052 765846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1052 650 PANTHER COBRA-LIKE PROTEIN 7 20 647 - -
Tan10g1052 650 Pfam COBRA-like protein 223 402 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4517 Tan-Chr1:110815503 Tan10g1052 Tan-Chr10:9420233 7.80E-224 dispersed
Tan09g2023 Tan-Chr9:70835222 Tan10g1052 Tan-Chr10:9420233 6.00E-34 dispersed
Tan10g1052 Tan-Chr10:9420233 Tan04g1898 Tan-Chr4:62525551 3.70E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1052 - - - 0.0