Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan10g1085 | ATGTCGTCTTCTCTGATTCTGAATCCTGTGGCGAGTTCTGAGCGATCGCGTGATTCGTCCAGAAAGAAAAAGAAGAAGAAAGCGACCAGGGAGGATGATCGTCAAGATCAGGATCACATCAAGTGGAAATCACAAGAGCAACATCAAGTTTACTCATCGAAACTGTTGCGCGCCTTGAGTCAGGTCAGGATCAGTCCTCCTTATTCTCCGTCGGTCCCGAACGAGGCGCCGCGACGCGGCCGAGCCGTGCGGGAGGCGGCGTATACGGTCCTGGCGATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTGACGAACCGTCTGAAGCTCAAGTTTCGAAAGCATAATCGGCAGAAGGCGCGTGCGAGTGGAAATGGAAACAGCCGAACAAAGAAGCCGAGAGTTAGCGTTTTGCGATTGAGAGGGAAGGGATTACCAACTGTACAGAGGAAAGTCCGGCTTCTCGGCCGGCTGGTTCCCGGCTGCCGGAAGCAACCGCTGCCGGTGATTCTGGATGAAGCAACTGATTACATACCCGCACTGGAGATGCAGGTCCGAGTCATGACCGCCATATTCAACTTGGTTTCAAGCTCTTCTTCTTCTTCTGGTACCGATTCTTCCATCTCCCCACCTTCTTCTACCTGA | 651 | 53.0 | MSSSLILNPVASSERSRDSSRKKKKKKATREDDRQDQDHIKWKSQEQHQVYSSKLLRALSQVRISPPYSPSVPNEAPRRGRAVREAAYTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKARASGNGNSRTKKPRVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEATDYIPALEMQVRVMTAIFNLVSSSSSSSGTDSSISPPSST | 216 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 10157437 | 10158087 | + | Tan0011565.1 | Tan10g1085 | 765879 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan10g1085 | 216 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 42 | 197 | IPR044660 | GO:0006355(InterPro) | |
| Tan10g1085 | 216 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Tan10g1085 | 216 | CDD | bHLH_AtIBH1_like | 139 | 193 | IPR044549 | GO:0006355(InterPro) | |
| Tan10g1085 | 216 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 154 | 197 | IPR036638 | GO:0046983(InterPro) | |
| Tan10g1085 | 216 | MobiDBLite | consensus disorder prediction | 25 | 45 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g2777 | Tan-Chr6:79941300 | Tan10g1085 | Tan-Chr10:10157437 | 4.30E-53 | dispersed | |
| Tan08g0681 | Tan-Chr8:6761334 | Tan10g1085 | Tan-Chr10:10157437 | 1.00E-22 | dispersed | |
| Tan10g1085 | Tan-Chr10:10157437 | Tan09g0071 | Tan-Chr9:3157852 | 5.50E-30 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan10g1085 | - | - | - | 0.0 |