Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1085 ATGTCGTCTTCTCTGATTCTGAATCCTGTGGCGAGTTCTGAGCGATCGCGTGATTCGTCCAGAAAGAAAAAGAAGAAGAAAGCGACCAGGGAGGATGATCGTCAAGATCAGGATCACATCAAGTGGAAATCACAAGAGCAACATCAAGTTTACTCATCGAAACTGTTGCGCGCCTTGAGTCAGGTCAGGATCAGTCCTCCTTATTCTCCGTCGGTCCCGAACGAGGCGCCGCGACGCGGCCGAGCCGTGCGGGAGGCGGCGTATACGGTCCTGGCGATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTGACGAACCGTCTGAAGCTCAAGTTTCGAAAGCATAATCGGCAGAAGGCGCGTGCGAGTGGAAATGGAAACAGCCGAACAAAGAAGCCGAGAGTTAGCGTTTTGCGATTGAGAGGGAAGGGATTACCAACTGTACAGAGGAAAGTCCGGCTTCTCGGCCGGCTGGTTCCCGGCTGCCGGAAGCAACCGCTGCCGGTGATTCTGGATGAAGCAACTGATTACATACCCGCACTGGAGATGCAGGTCCGAGTCATGACCGCCATATTCAACTTGGTTTCAAGCTCTTCTTCTTCTTCTGGTACCGATTCTTCCATCTCCCCACCTTCTTCTACCTGA 651 53.0 MSSSLILNPVASSERSRDSSRKKKKKKATREDDRQDQDHIKWKSQEQHQVYSSKLLRALSQVRISPPYSPSVPNEAPRRGRAVREAAYTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKARASGNGNSRTKKPRVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEATDYIPALEMQVRVMTAIFNLVSSSSSSSGTDSSISPPSST 216
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 10157437 10158087 + Tan0011565.1 Tan10g1085 765879
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1085 216 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 197 IPR044660 GO:0006355(InterPro)
Tan10g1085 216 MobiDBLite consensus disorder prediction 1 47 - -
Tan10g1085 216 CDD bHLH_AtIBH1_like 139 193 IPR044549 GO:0006355(InterPro)
Tan10g1085 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 197 IPR036638 GO:0046983(InterPro)
Tan10g1085 216 MobiDBLite consensus disorder prediction 25 45 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2777 Tan-Chr6:79941300 Tan10g1085 Tan-Chr10:10157437 4.30E-53 dispersed
Tan08g0681 Tan-Chr8:6761334 Tan10g1085 Tan-Chr10:10157437 1.00E-22 dispersed
Tan10g1085 Tan-Chr10:10157437 Tan09g0071 Tan-Chr9:3157852 5.50E-30 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1085 - - - 0.0