Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1104 ATGGCTCTCGATGCCGAAGCGGCTCCAGCGGCGGAGTTGGCGCTTGCTGATACCGACATCAACTGGAACAGGTTGGACAAGACAAAGTTTCATATAATTGGGGCAATACTCTTTACTGCTCAGTCAGCCTTGTTACATCCAACAGCAGTTGTAAAAACCAGAATGCAAGTTGCTGGATCTGGTCTATCTCACGTGCGTGGATTGTCAGTTTTCTGTAATATATTGAAGTCTGATGGAATCTCTGGCTTATATAGAGGTTTTGGTACTTCAGCGATTGGATCATTACCTGGTAGAGTACTGGCTTTAACATCCCTAGAAATATCAAAAGACATAATGTTGAAATATACTGGAAGTCTGGAAATAACTGAAGCAACACGTCTTGGTCTTGCTAATGGAGTGGCGGGCATGATCTCAAATCTAGTTTCATGCATATACTACGTGCCATTGGACGTGATTTGCCAGAGGTTGATGGTTCAAGGGCTGCCTGGAACCACCTTCTGCAATGGCCCAGTTGATGTTGTCAGAAAAGTGATGAAGGCCGAAGGATTTCGTGGTTTATATAGGGGTTTTGGATTAACGGCTGTAACTCAGTCCCCAGCATCTGCTCTCTGGTGGGGTGTCTATGGTGCTGCTCAACATATCATCTGGAGGAGCTTAGGATATCGAGATAATACGGAGAAGAAACCTTCTCACATGGAGATGGTGACGGTTCAGGCTGCAGCAGGAATGGTGGCAGGTGCTTGTTCCTCTGTTATCACGACTCCTGTGGACACAGTAAAGACTCGACTTCAGGTCATTGATAACTATGGAATTGGAAGACCATCTGTGCTCAAGACTACAAGAGCACTTCTCAAGGAAGATGGATGCTTGGGATTTTATAGGGGCTTTGGACCTCGGTTTTTGAATATGTCACTTTATGGAACCACGATGATAGTCACTTATGAACTGATCAAGAGACTTTCCGTAAAGGAGATCGTGACATCTTGA 987 44.98 MALDAEAAPAAELALADTDINWNRLDKTKFHIIGAILFTAQSALLHPTAVVKTRMQVAGSGLSHVRGLSVFCNILKSDGISGLYRGFGTSAIGSLPGRVLALTSLEISKDIMLKYTGSLEITEATRLGLANGVAGMISNLVSCIYYVPLDVICQRLMVQGLPGTTFCNGPVDVVRKVMKAEGFRGLYRGFGLTAVTQSPASALWWGVYGAAQHIIWRSLGYRDNTEKKPSHMEMVTVQAAAGMVAGACSSVITTPVDTVKTRLQVIDNYGIGRPSVLKTTRALLKEDGCLGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVKEIVTS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10667598 10670399 + Tan0018858.1 Tan10g1104 765898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1104 328 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
Tan10g1104 328 Pfam Mitochondrial carrier protein 237 322 IPR018108 -
Tan10g1104 328 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Tan10g1104 328 Pfam Mitochondrial carrier protein 32 115 IPR018108 -
Tan10g1104 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
Tan10g1104 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 214 IPR018108 -
Tan10g1104 328 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 324 - -
Tan10g1104 328 Gene3D Mitochondrial carrier domain 122 325 IPR023395 -
Tan10g1104 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 111 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g1104 Tan-Chr10:10667598 Tan11g0423 Tan-Chr11:3418696 6.30E-86 dispersed
Tan10g1104 Tan-Chr10:10667598 Tan01g4590 Tan-Chr1:111933046 1.40E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1104 K15121 - csv:101213375 596.275