Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1130 ATGAGAGTTGGGAAGTATGAGTTGGGGAAAACTCTTGGAGAAGGCAATTTCGGCAAGGTAAAGTTGGCCGCCGACCTCCGTACCGGCCGCCGTTACGCCGTCAAGATCCTCGACAAGACCAAGATTATCCATCTCAACTTCTCCGATCAGATTAAGCGTGAAATAAGCACTCTCAAGCTCCTCAGGCATCCGAATGTTGTTAGACTCTATGAGGTTTTAGCTAGTAAGACGAAGATTTATATGGTTTTGGAGTGCGCCACTGGTGGCGAATTGTTTGATAGAATCGAATCGAAAGGTAAAGTGGATGAAGCTGAAGGACGGCGACTATTCCAGCAGCTTATTGATGGTCTAAGCTATTGCCATGACAAAGGAGTTTACCACAGGGATCTCAAGCTGGAAAACGTGCTTGTTGATGCTAAGGGAAACATTAAGATTTCTGATTTTGGCCTCAGTGCTTTACCACAGAATTGCAGGGAAGATGGTTTGCTGCACACAACCTGTGGAAGTCCCAACTATGTTGCACCAGAGGTACTTGCTAATAGAGGATATAATGGAGCTGCCTCTGATATATGGTCATGTGGGGTTATCTTGTATGTTATTCTGACAGCTTGTCTTCCTTTCGACGAGACGAATCTGGCTCTACTTTATAAAAAGACTTTGAGAGGGGATTTTCAGATACCCAAATGGTTATCAGCAGGTGCCAGAAATTTGATAAAGAAAACTCTTGACCCCAATCCCAATACTCGGATTACAATGGCAGGAATTAAAAAGGATGAATGGTTCAAGACTGACTATAATCCTGCTTCTCCTTGTTATGATGATGATGAGGAGGAGGAGGAGGAGGGTCCGTTTATTGTTCAGGATGATGCCATCTCAACGCATGATGAGCCATCTGACGTTGAAAACAGCCCAGAATCTCCAACTATTATCAACGCGTTTGAGTTAATTGGGATGTCTTCAAGTCTGGACCTGTCCGGCTTCTTTGAGCAAGAGGATGTTTCTGAGAGGAAGATCAGATTTACATCCAACCATTCTGCCAAAGACCTGCTTGAGAGAATCGAGATTATTGCAACGGATATGGGATTTCGAGTTCAAAAGAAAAGTGGAAAGCTGAAAGTGGTGCAAGAGATGAGAAGTCAAAGAAGCCTAAGTAATCTCTCCTTTGTAGCCGAGGTCTTTGAGATAAGCCCATTGCTTCACGTAGTTGAACTGAAAAAATCTTTTGGAGATTCATCAGCTTACCGACAGTTATGTGAAAGGCTGTCGAATGATTTGGGCACGAACCCTGAGCTCGAACGGCATAATTCAGGTTCATTCACATTAAAAAGTACATGTTAG 1338 43.57 MRVGKYELGKTLGEGNFGKVKLAADLRTGRRYAVKILDKTKIIHLNFSDQIKREISTLKLLRHPNVVRLYEVLASKTKIYMVLECATGGELFDRIESKGKVDEAEGRRLFQQLIDGLSYCHDKGVYHRDLKLENVLVDAKGNIKISDFGLSALPQNCREDGLLHTTCGSPNYVAPEVLANRGYNGAASDIWSCGVILYVILTACLPFDETNLALLYKKTLRGDFQIPKWLSAGARNLIKKTLDPNPNTRITMAGIKKDEWFKTDYNPASPCYDDDEEEEEEGPFIVQDDAISTHDEPSDVENSPESPTIINAFELIGMSSSLDLSGFFEQEDVSERKIRFTSNHSAKDLLERIEIIATDMGFRVQKKSGKLKVVQEMRSQRSLSNLSFVAEVFEISPLLHVVELKKSFGDSSAYRQLCERLSNDLGTNPELERHNSGSFTLKSTC 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10956116 10959938 + Tan0014791.1 Tan10g1130 765924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1130 445 Gene3D Kinase associated domain 1, KA1 309 427 - -
Tan10g1130 445 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524(InterPro)
Tan10g1130 445 FunFam Non-specific serine/threonine protein kinase 1 304 - -
Tan10g1130 445 FunFam Non-specific serine/threonine protein kinase 1 85 - -
Tan10g1130 445 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165(InterPro)
Tan10g1130 445 FunFam Non-specific serine/threonine protein kinase 307 429 - -
Tan10g1130 445 ProSiteProfiles Protein kinase domain profile. 6 261 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1130 445 Pfam NAF domain 307 366 IPR004041 GO:0007165(InterPro)
Tan10g1130 445 SUPERFAMILY Protein kinase-like (PK-like) 3 262 IPR011009 -
Tan10g1130 445 CDD CIPK_C 311 422 - -
Tan10g1130 445 Gene3D Transferase(Phosphotransferase) domain 1 2 308 - -
Tan10g1130 445 SMART serkin_6 6 261 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1130 445 Pfam Protein kinase domain 6 261 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1130 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g1130 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 415 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2817 Tan-Chr6:80264138 Tan10g1130 Tan-Chr10:10956116 4.70E-156 dispersed
Tan07g1124 Tan-Chr7:38064942 Tan10g1130 Tan-Chr10:10956116 6.20E-50 dispersed
Tan10g0068 Tan-Chr10:1022351 Tan10g1130 Tan-Chr10:10956116 1.50E-114 dispersed
Tan10g0764 Tan-Chr10:6327613 Tan10g1130 Tan-Chr10:10956116 7.10E-77 dispersed
Tan10g1130 Tan-Chr10:10956116 Tan03g1517 Tan-Chr3:71442478 1.60E-39 dispersed
Tan10g1130 Tan-Chr10:10956116 Tan05g2668 Tan-Chr5:78077264 1.70E-121 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68139 PF00069 Pkinase 4.20E-72 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1130 K07198 - csv:101205987 813.527