Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g1176 | ATGGACAACGATTTTGAGTTCCCATCTGCAAGCAATATGGACGAGGAAATGGGCATTCCCGAGGACGAAGCGCAGAGCTCGCTTTTGAAGGTTGGCGAAGAGAAGGAGATTGGAAAGAGCGGGCTGAAGAAGAAACTTGTTAAAGAAGGCGAAGGATGGGAAACTCCCGACACTGGAGATGAAGTCGAAGTGCATTATACGGGAACCCTTCTTGATGGGACTCAATTTGATTCTAGCCGTGATCGAGGAACGCCTTTCAAGTTCAAGCTCGGCGAAGGGCAAGTGATTAGAGGATGGGATGAAGGTATCCGAACTATGAAAAAGGGTGAAAATGCAGTTTTCACGATACCTCCTGAATTGGCCTATGGAGAATCTGGTTCTCCTCCAACAATTCCACCTAACGCTACTCTTCAATTTGATGTTGAGCTACTTTCATGGCACAGCGTCAAAGATATCTGTCAAGATGGAGGAATCTTCAAGAAGATCCTTGTTAAAGGAGATGGTTGGGACAAACCGAAGGATCTGGACGAAGTGTTGGTTAATTATGAGGCTCGTCTGGAAGATGGTACACTGATCTCAATGTCTGATGGGGTTGAATTCACTGCTGAAAAGGGGTACTTCTGTCCTGCCTTGGCAACATCTGTGAAGACAATGAAGAAAGGAGAGAAAGTGTTGTTGACTGTGAGGCCACAATATGCATTTGGGGAGTCTGGCAGGGCTGCAGCTGGGGAAGAAGGGGCTGTGCCTCCTAATGCTACACTTCAAATTACCCTAGAATTGGTTTCTTGGAAAACTGTTACAGACATTAATAAGGATAAGAAGGTTTTGAAAAAGACCCAGAAGGAGGGAGAGGGATATGATCAACCAAATGATGGAGCAGTGGTTCAAGTGAAACTTACTGGTAAATTGGCTGATGGGACGATTTTTACTAAGAAGGGCGATGATGAAAAGCCTTTTGAGTTCAAAACTGACGAAGAACAAGTCATTGAAGGACTTGATTTGGCTGTGAGAAAGATGAAGAAAGGAGAAGTTGCCTTGGTGACCATCCATCCACAATATGCTTTTGGATCTTCCGACTCACCTCAAGACCTGGCTGTAGTTCCTGCAAATTCAACTGTATATTACGAAGTTGAGCTGGTTTCATACGTTAAAGAAAAGGAATCTTGGGATCTAAACACACCAGAGAAAATAGAAGCAGCAGGCAAAAAGAAGGAAGAAGGAAATGCTTTATTCAAAGCCGGAAAATATGACAGAGCATCAAGAAGATATGAAAAGGCTGTGCGCTACATTGAATATGACACTTCTTTCAACGATGAGGAGAAGCAACAGAGCAAGGCACTAAAAATTTCTTGCAACCTCAACGATGCTGCGTGCAAACTGAAAGTTAAAGACTACAAGCAAGCAGAGAAACTCTGTACAAAGGTTTTGGAACTCGACAGTAGGAATGTGAAAGCTCTCTATAGAAGGGCACAAGCATATATCCAACTCGTTGATCTTGATCTTGCTGAGCAGGATATCAAGAAAGCCCTTGAGATAGACCCAGATAACAGGGAAGTGAAGATCGAATACCGTCAGTTGAAGGAAAAGGTGAGAGAATACAACAAGAGAGATGCACAGTTTTATGGCAACATTTTTGCAAGAATGAACAAGTTGGAGCAGGCAAAGTCTGCTAGTTCTTCAGCAGGGAAGCAGGAGGCAGTGCCAATGACCATTGATAGCAAAGCTTAA | 1728 | 43.63 | MDNDFEFPSASNMDEEMGIPEDEAQSSLLKVGEEKEIGKSGLKKKLVKEGEGWETPDTGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFKLGEGQVIRGWDEGIRTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDICQDGGIFKKILVKGDGWDKPKDLDEVLVNYEARLEDGTLISMSDGVEFTAEKGYFCPALATSVKTMKKGEKVLLTVRPQYAFGESGRAAAGEEGAVPPNATLQITLELVSWKTVTDINKDKKVLKKTQKEGEGYDQPNDGAVVQVKLTGKLADGTIFTKKGDDEKPFEFKTDEEQVIEGLDLAVRKMKKGEVALVTIHPQYAFGSSDSPQDLAVVPANSTVYYEVELVSYVKEKESWDLNTPEKIEAAGKKKEEGNALFKAGKYDRASRRYEKAVRYIEYDTSFNDEEKQQSKALKISCNLNDAACKLKVKDYKQAEKLCTKVLELDSRNVKALYRRAQAYIQLVDLDLAEQDIKKALEIDPDNREVKIEYRQLKEKVREYNKRDAQFYGNIFARMNKLEQAKSASSSAGKQEAVPMTIDSKA | 575 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 11837588 | 11841501 | + | Tan0018626.1 | Tan10g1176 | 765970 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g1176 | 575 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 59 | 147 | IPR001179 | GO:0003755(InterPro) | |
Tan10g1176 | 575 | SUPERFAMILY | TPR-like | 395 | 548 | IPR011990 | GO:0005515(InterPro) | |
Tan10g1176 | 575 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 32 | 145 | IPR050754 | - | |
Tan10g1176 | 575 | SUPERFAMILY | FKBP-like | 31 | 155 | - | - | |
Tan10g1176 | 575 | FunFam | Peptidylprolyl isomerase | 151 | 264 | - | - | |
Tan10g1176 | 575 | Pfam | Tetratricopeptide repeat | 483 | 516 | IPR019734 | GO:0005515(InterPro) | |
Tan10g1176 | 575 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 53 | 144 | IPR001179 | GO:0003755(InterPro) | |
Tan10g1176 | 575 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 287 | 380 | IPR001179 | GO:0003755(InterPro) | |
Tan10g1176 | 575 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 170 | 261 | IPR001179 | GO:0003755(InterPro) | |
Tan10g1176 | 575 | Gene3D | - | 151 | 263 | IPR046357 | GO:0003755(InterPro) | |
Tan10g1176 | 575 | FunFam | Peptidylprolyl isomerase | 32 | 150 | - | - | |
Tan10g1176 | 575 | Coils | Coil | 516 | 536 | - | - | |
Tan10g1176 | 575 | MobiDBLite | consensus disorder prediction | 27 | 42 | - | - | |
Tan10g1176 | 575 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 175 | 264 | IPR001179 | GO:0003755(InterPro) | |
Tan10g1176 | 575 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Tan10g1176 | 575 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 292 | 383 | IPR001179 | GO:0003755(InterPro) | |
Tan10g1176 | 575 | FunFam | Peptidylprolyl isomerase | 388 | 543 | - | - | |
Tan10g1176 | 575 | SUPERFAMILY | FKBP-like | 269 | 400 | - | - | |
Tan10g1176 | 575 | ProSiteProfiles | TPR repeat profile. | 483 | 516 | IPR019734 | GO:0005515(InterPro) | |
Tan10g1176 | 575 | Gene3D | - | 264 | 388 | IPR046357 | GO:0003755(InterPro) | |
Tan10g1176 | 575 | Gene3D | - | 31 | 150 | IPR046357 | GO:0003755(InterPro) | |
Tan10g1176 | 575 | MobiDBLite | consensus disorder prediction | 555 | 575 | - | - | |
Tan10g1176 | 575 | FunFam | Peptidylprolyl isomerase | 265 | 385 | - | - | |
Tan10g1176 | 575 | SMART | tpr_5 | 449 | 482 | IPR019734 | GO:0005515(InterPro) | |
Tan10g1176 | 575 | SMART | tpr_5 | 400 | 433 | IPR019734 | GO:0005515(InterPro) | |
Tan10g1176 | 575 | SMART | tpr_5 | 483 | 516 | IPR019734 | GO:0005515(InterPro) | |
Tan10g1176 | 575 | Gene3D | Tetratricopeptide repeat domain | 389 | 543 | IPR011990 | GO:0005515(InterPro) | |
Tan10g1176 | 575 | SUPERFAMILY | FKBP-like | 152 | 267 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1177 | Tan-Chr2:26231071 | Tan10g1176 | Tan-Chr10:11837588 | 4.00E-16 | dispersed | |
Tan03g0866 | Tan-Chr3:64888470 | Tan10g1176 | Tan-Chr10:11837588 | 1.10E-62 | dispersed | |
Tan03g0867 | Tan-Chr3:64888470 | Tan10g1176 | Tan-Chr10:11837588 | 1.10E-62 | dispersed | |
Tan04g2407 | Tan-Chr4:82907819 | Tan10g1176 | Tan-Chr10:11837588 | 5.40E-09 | dispersed | |
Tan06g1207 | Tan-Chr6:12544498 | Tan10g1176 | Tan-Chr10:11837588 | 6.80E-242 | dispersed | |
Tan07g0629 | Tan-Chr7:9760002 | Tan10g1176 | Tan-Chr10:11837588 | 3.00E-14 | dispersed | |
Tan07g0630 | Tan-Chr7:9760002 | Tan10g1176 | Tan-Chr10:11837588 | 2.50E-14 | dispersed | |
Tan10g1176 | Tan-Chr10:11837588 | Tan11g0200 | Tan-Chr11:1687992 | 1.40E-19 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g1176 | K09571 | - | csv:101210041 | 1017.68 |