Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1176 ATGGACAACGATTTTGAGTTCCCATCTGCAAGCAATATGGACGAGGAAATGGGCATTCCCGAGGACGAAGCGCAGAGCTCGCTTTTGAAGGTTGGCGAAGAGAAGGAGATTGGAAAGAGCGGGCTGAAGAAGAAACTTGTTAAAGAAGGCGAAGGATGGGAAACTCCCGACACTGGAGATGAAGTCGAAGTGCATTATACGGGAACCCTTCTTGATGGGACTCAATTTGATTCTAGCCGTGATCGAGGAACGCCTTTCAAGTTCAAGCTCGGCGAAGGGCAAGTGATTAGAGGATGGGATGAAGGTATCCGAACTATGAAAAAGGGTGAAAATGCAGTTTTCACGATACCTCCTGAATTGGCCTATGGAGAATCTGGTTCTCCTCCAACAATTCCACCTAACGCTACTCTTCAATTTGATGTTGAGCTACTTTCATGGCACAGCGTCAAAGATATCTGTCAAGATGGAGGAATCTTCAAGAAGATCCTTGTTAAAGGAGATGGTTGGGACAAACCGAAGGATCTGGACGAAGTGTTGGTTAATTATGAGGCTCGTCTGGAAGATGGTACACTGATCTCAATGTCTGATGGGGTTGAATTCACTGCTGAAAAGGGGTACTTCTGTCCTGCCTTGGCAACATCTGTGAAGACAATGAAGAAAGGAGAGAAAGTGTTGTTGACTGTGAGGCCACAATATGCATTTGGGGAGTCTGGCAGGGCTGCAGCTGGGGAAGAAGGGGCTGTGCCTCCTAATGCTACACTTCAAATTACCCTAGAATTGGTTTCTTGGAAAACTGTTACAGACATTAATAAGGATAAGAAGGTTTTGAAAAAGACCCAGAAGGAGGGAGAGGGATATGATCAACCAAATGATGGAGCAGTGGTTCAAGTGAAACTTACTGGTAAATTGGCTGATGGGACGATTTTTACTAAGAAGGGCGATGATGAAAAGCCTTTTGAGTTCAAAACTGACGAAGAACAAGTCATTGAAGGACTTGATTTGGCTGTGAGAAAGATGAAGAAAGGAGAAGTTGCCTTGGTGACCATCCATCCACAATATGCTTTTGGATCTTCCGACTCACCTCAAGACCTGGCTGTAGTTCCTGCAAATTCAACTGTATATTACGAAGTTGAGCTGGTTTCATACGTTAAAGAAAAGGAATCTTGGGATCTAAACACACCAGAGAAAATAGAAGCAGCAGGCAAAAAGAAGGAAGAAGGAAATGCTTTATTCAAAGCCGGAAAATATGACAGAGCATCAAGAAGATATGAAAAGGCTGTGCGCTACATTGAATATGACACTTCTTTCAACGATGAGGAGAAGCAACAGAGCAAGGCACTAAAAATTTCTTGCAACCTCAACGATGCTGCGTGCAAACTGAAAGTTAAAGACTACAAGCAAGCAGAGAAACTCTGTACAAAGGTTTTGGAACTCGACAGTAGGAATGTGAAAGCTCTCTATAGAAGGGCACAAGCATATATCCAACTCGTTGATCTTGATCTTGCTGAGCAGGATATCAAGAAAGCCCTTGAGATAGACCCAGATAACAGGGAAGTGAAGATCGAATACCGTCAGTTGAAGGAAAAGGTGAGAGAATACAACAAGAGAGATGCACAGTTTTATGGCAACATTTTTGCAAGAATGAACAAGTTGGAGCAGGCAAAGTCTGCTAGTTCTTCAGCAGGGAAGCAGGAGGCAGTGCCAATGACCATTGATAGCAAAGCTTAA 1728 43.63 MDNDFEFPSASNMDEEMGIPEDEAQSSLLKVGEEKEIGKSGLKKKLVKEGEGWETPDTGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFKLGEGQVIRGWDEGIRTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDICQDGGIFKKILVKGDGWDKPKDLDEVLVNYEARLEDGTLISMSDGVEFTAEKGYFCPALATSVKTMKKGEKVLLTVRPQYAFGESGRAAAGEEGAVPPNATLQITLELVSWKTVTDINKDKKVLKKTQKEGEGYDQPNDGAVVQVKLTGKLADGTIFTKKGDDEKPFEFKTDEEQVIEGLDLAVRKMKKGEVALVTIHPQYAFGSSDSPQDLAVVPANSTVYYEVELVSYVKEKESWDLNTPEKIEAAGKKKEEGNALFKAGKYDRASRRYEKAVRYIEYDTSFNDEEKQQSKALKISCNLNDAACKLKVKDYKQAEKLCTKVLELDSRNVKALYRRAQAYIQLVDLDLAEQDIKKALEIDPDNREVKIEYRQLKEKVREYNKRDAQFYGNIFARMNKLEQAKSASSSAGKQEAVPMTIDSKA 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11837588 11841501 + Tan0018626.1 Tan10g1176 765970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1176 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 59 147 IPR001179 GO:0003755(InterPro)
Tan10g1176 575 SUPERFAMILY TPR-like 395 548 IPR011990 GO:0005515(InterPro)
Tan10g1176 575 PANTHER PEPTIDYLPROLYL ISOMERASE 32 145 IPR050754 -
Tan10g1176 575 SUPERFAMILY FKBP-like 31 155 - -
Tan10g1176 575 FunFam Peptidylprolyl isomerase 151 264 - -
Tan10g1176 575 Pfam Tetratricopeptide repeat 483 516 IPR019734 GO:0005515(InterPro)
Tan10g1176 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 53 144 IPR001179 GO:0003755(InterPro)
Tan10g1176 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 287 380 IPR001179 GO:0003755(InterPro)
Tan10g1176 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 170 261 IPR001179 GO:0003755(InterPro)
Tan10g1176 575 Gene3D - 151 263 IPR046357 GO:0003755(InterPro)
Tan10g1176 575 FunFam Peptidylprolyl isomerase 32 150 - -
Tan10g1176 575 Coils Coil 516 536 - -
Tan10g1176 575 MobiDBLite consensus disorder prediction 27 42 - -
Tan10g1176 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 175 264 IPR001179 GO:0003755(InterPro)
Tan10g1176 575 MobiDBLite consensus disorder prediction 1 42 - -
Tan10g1176 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 383 IPR001179 GO:0003755(InterPro)
Tan10g1176 575 FunFam Peptidylprolyl isomerase 388 543 - -
Tan10g1176 575 SUPERFAMILY FKBP-like 269 400 - -
Tan10g1176 575 ProSiteProfiles TPR repeat profile. 483 516 IPR019734 GO:0005515(InterPro)
Tan10g1176 575 Gene3D - 264 388 IPR046357 GO:0003755(InterPro)
Tan10g1176 575 Gene3D - 31 150 IPR046357 GO:0003755(InterPro)
Tan10g1176 575 MobiDBLite consensus disorder prediction 555 575 - -
Tan10g1176 575 FunFam Peptidylprolyl isomerase 265 385 - -
Tan10g1176 575 SMART tpr_5 449 482 IPR019734 GO:0005515(InterPro)
Tan10g1176 575 SMART tpr_5 400 433 IPR019734 GO:0005515(InterPro)
Tan10g1176 575 SMART tpr_5 483 516 IPR019734 GO:0005515(InterPro)
Tan10g1176 575 Gene3D Tetratricopeptide repeat domain 389 543 IPR011990 GO:0005515(InterPro)
Tan10g1176 575 SUPERFAMILY FKBP-like 152 267 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1177 Tan-Chr2:26231071 Tan10g1176 Tan-Chr10:11837588 4.00E-16 dispersed
Tan03g0866 Tan-Chr3:64888470 Tan10g1176 Tan-Chr10:11837588 1.10E-62 dispersed
Tan03g0867 Tan-Chr3:64888470 Tan10g1176 Tan-Chr10:11837588 1.10E-62 dispersed
Tan04g2407 Tan-Chr4:82907819 Tan10g1176 Tan-Chr10:11837588 5.40E-09 dispersed
Tan06g1207 Tan-Chr6:12544498 Tan10g1176 Tan-Chr10:11837588 6.80E-242 dispersed
Tan07g0629 Tan-Chr7:9760002 Tan10g1176 Tan-Chr10:11837588 3.00E-14 dispersed
Tan07g0630 Tan-Chr7:9760002 Tan10g1176 Tan-Chr10:11837588 2.50E-14 dispersed
Tan10g1176 Tan-Chr10:11837588 Tan11g0200 Tan-Chr11:1687992 1.40E-19 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1176 K09571 - csv:101210041 1017.68