Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g1192 | ATGGAGAAGGACAAACCCCAGAGCCATTCTGGTGGATTTCTACCCCCATCGAGTCGTTACTCAGGTCTTTCACCAACTGGAAGCAGTTTCAATGGAAAATCTGAGGCAACCTCATCTTCAATGTCGCTTCCTCCAATGGCTTCGGGTGCTAATTCCGATTCGAGTCAATTCAGTCGTGGAATGTCCACTGATTCTAATCGGTTCAGCCATGATATTAGTCGGATGCCTGATAACCCGCCAAGAAATATTGGTCACAGACGTGCTCATTCAGAAATACTGACCCTTCCTGATGATATTTGTTTCGACAGTGACCTTGGTGTCATTGGCAGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTCGATATGGACAAATTCAATTCTTCCACTGCAACCTCTGCAATACAAGTTGGTGAGTCATCTTCTGCAGTGAGATCAACTCCTACTTCAGAAATTGGAGCAGCAACTTCTAAAGATGATACTGCTGTTGGTTTGAAGGAGAGGTCAAGAGTTAGACACCAGCACAGCCAGTCCATGGATGGCTTGACAACCATAAAGCCTGAGATGCTTGTCTCAGGGTCGGAAGAAGTCTCTGCCGCTGATTCCAAGAAAGCCATGTCAGCTACAAAGCTTGCTGAGCTTGCGCTAATTGACCCCAAACGTGCAAAGAGGATATGGGCAAATAGACAATCAGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTACTGCTGAGAACAGTGAACTAAAGCTGCGATTGCAGACAATGGAGCAGCAGGTTCACCTACAAGATGCTCTAAATGAAGCACTGAAAGAGGAAATTCAGCATTTGAAAGTATTGACTGGCCAATCAATCCCAAATGGTGGATCAATGACAAACTTTGCTTCCTACGGAGCTGGCCAACAATTTTACCCAAACAATCAAGCAATGCACGCTTTGTTAACTGCTCAGCAGTTTCAGCAACTTCAAATCCACTCACAGCAGCAGCAGCAACAACATTTCCAGTACCATCAGATGCATCAGCTTCAGCAACAATCAACTGGGGACATCAAAATGAAAGGTTCGGAATCAGAATCCTGGGAATCAGAAGCCTGGAGGGTTTGTCCTGAGGGGTTCTGA | 1239 | 45.44 | MEKDKPQSHSGGFLPPSSRYSGLSPTGSSFNGKSEATSSSMSLPPMASGANSDSSQFSRGMSTDSNRFSHDISRMPDNPPRNIGHRRAHSEILTLPDDICFDSDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSTATSAIQVGESSSAVRSTPTSEIGAATSKDDTAVGLKERSRVRHQHSQSMDGLTTIKPEMLVSGSEEVSAADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQSIPNGGSMTNFASYGAGQQFYPNNQAMHALLTAQQFQQLQIHSQQQQQQHFQYHQMHQLQQQSTGDIKMKGSESESWESEAWRVCPEGF | 412 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 12019986 | 12027749 | - | Tan0011396.1 | Tan10g1192 | 765986 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g1192 | 412 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
Tan10g1192 | 412 | Gene3D | - | 227 | 280 | - | - | |
Tan10g1192 | 412 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 226 | 289 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g1192 | 412 | MobiDBLite | consensus disorder prediction | 11 | 69 | - | - | |
Tan10g1192 | 412 | CDD | bZIP_plant_RF2 | 229 | 278 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g1192 | 412 | FunFam | probable transcription factor PosF21 | 227 | 280 | - | - | |
Tan10g1192 | 412 | Coils | Coil | 244 | 313 | - | - | |
Tan10g1192 | 412 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 69 | 387 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Tan10g1192 | 412 | Pfam | bZIP transcription factor | 228 | 282 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g1192 | 412 | SMART | brlzneu | 224 | 288 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g1192 | 412 | SUPERFAMILY | Leucine zipper domain | 228 | 279 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g0914 | Tan-Chr5:7367698 | Tan10g1192 | Tan-Chr10:12019986 | 1.70E-09 | dispersed | |
Tan10g1192 | Tan-Chr10:12019986 | Tan10g1194 | Tan-Chr10:12019986 | 5.70E-201 | dispersed | |
Tan10g1192 | Tan-Chr10:12019986 | Tan10g1193 | Tan-Chr10:12019986 | 3.50E-158 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28569 | PF00170 | bZIP_1 | 1.10E-08 | CL0018 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g1192 | - | - | - | 0.0 |