Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1192 ATGGAGAAGGACAAACCCCAGAGCCATTCTGGTGGATTTCTACCCCCATCGAGTCGTTACTCAGGTCTTTCACCAACTGGAAGCAGTTTCAATGGAAAATCTGAGGCAACCTCATCTTCAATGTCGCTTCCTCCAATGGCTTCGGGTGCTAATTCCGATTCGAGTCAATTCAGTCGTGGAATGTCCACTGATTCTAATCGGTTCAGCCATGATATTAGTCGGATGCCTGATAACCCGCCAAGAAATATTGGTCACAGACGTGCTCATTCAGAAATACTGACCCTTCCTGATGATATTTGTTTCGACAGTGACCTTGGTGTCATTGGCAGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTCGATATGGACAAATTCAATTCTTCCACTGCAACCTCTGCAATACAAGTTGGTGAGTCATCTTCTGCAGTGAGATCAACTCCTACTTCAGAAATTGGAGCAGCAACTTCTAAAGATGATACTGCTGTTGGTTTGAAGGAGAGGTCAAGAGTTAGACACCAGCACAGCCAGTCCATGGATGGCTTGACAACCATAAAGCCTGAGATGCTTGTCTCAGGGTCGGAAGAAGTCTCTGCCGCTGATTCCAAGAAAGCCATGTCAGCTACAAAGCTTGCTGAGCTTGCGCTAATTGACCCCAAACGTGCAAAGAGGATATGGGCAAATAGACAATCAGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTACTGCTGAGAACAGTGAACTAAAGCTGCGATTGCAGACAATGGAGCAGCAGGTTCACCTACAAGATGCTCTAAATGAAGCACTGAAAGAGGAAATTCAGCATTTGAAAGTATTGACTGGCCAATCAATCCCAAATGGTGGATCAATGACAAACTTTGCTTCCTACGGAGCTGGCCAACAATTTTACCCAAACAATCAAGCAATGCACGCTTTGTTAACTGCTCAGCAGTTTCAGCAACTTCAAATCCACTCACAGCAGCAGCAGCAACAACATTTCCAGTACCATCAGATGCATCAGCTTCAGCAACAATCAACTGGGGACATCAAAATGAAAGGTTCGGAATCAGAATCCTGGGAATCAGAAGCCTGGAGGGTTTGTCCTGAGGGGTTCTGA 1239 45.44 MEKDKPQSHSGGFLPPSSRYSGLSPTGSSFNGKSEATSSSMSLPPMASGANSDSSQFSRGMSTDSNRFSHDISRMPDNPPRNIGHRRAHSEILTLPDDICFDSDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSTATSAIQVGESSSAVRSTPTSEIGAATSKDDTAVGLKERSRVRHQHSQSMDGLTTIKPEMLVSGSEEVSAADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQSIPNGGSMTNFASYGAGQQFYPNNQAMHALLTAQQFQQLQIHSQQQQQQHFQYHQMHQLQQQSTGDIKMKGSESESWESEAWRVCPEGF 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12019986 12027749 - Tan0011396.1 Tan10g1192 765986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1192 412 MobiDBLite consensus disorder prediction 1 85 - -
Tan10g1192 412 Gene3D - 227 280 - -
Tan10g1192 412 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 226 289 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g1192 412 MobiDBLite consensus disorder prediction 11 69 - -
Tan10g1192 412 CDD bZIP_plant_RF2 229 278 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g1192 412 FunFam probable transcription factor PosF21 227 280 - -
Tan10g1192 412 Coils Coil 244 313 - -
Tan10g1192 412 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 69 387 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Tan10g1192 412 Pfam bZIP transcription factor 228 282 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g1192 412 SMART brlzneu 224 288 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g1192 412 SUPERFAMILY Leucine zipper domain 228 279 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0914 Tan-Chr5:7367698 Tan10g1192 Tan-Chr10:12019986 1.70E-09 dispersed
Tan10g1192 Tan-Chr10:12019986 Tan10g1194 Tan-Chr10:12019986 5.70E-201 dispersed
Tan10g1192 Tan-Chr10:12019986 Tan10g1193 Tan-Chr10:12019986 3.50E-158 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28569 PF00170 bZIP_1 1.10E-08 CL0018 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1192 - - - 0.0