Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g1193 | ATGGAGAAGGACAAACCCCAGAGCCATTCTGGTGGATTTCTACCCCCATCGAGTCGTTACTCAGGTCTTTCACCAACTGGAAGCAGTTTCAATGGAAAATCTGAGGCAACCTCATCTTCAATGTCGCTTCCTCCAATGGCTTCGGGTGCTAATTCCGATTCGAGTCAATTCAGTCGTGGAATGTCCACTGATTCTAATCGGTTCAGCCATGATATTAGTCGGATGCCTGATAACCCGCCAAGAAATATTGGTCACAGACGTGCTCATTCAGAAATACTGACCCTTCCTGATGATATTTGTTTCGACAGTGACCTTGGTGTCATTGGCAGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTCGATATGGACAAATTCAATTCTTCCACTGCAACCTCTGCAATACAAGTTGGTGAGTCATCTTCTGCAGTGAGATCAACTCCTACTTCAGAAATTGGAGCAGCAACTTCTAAAGATGATACTGCTGTTGGTTTGAAGGAGAGGTCAAGAGTTAGACACCAGCACAGCCAGTCCATGGATGGCTTGACAACCATAAAGCCTGAGATGCTTGTCTCAGGGTCGGAAGAAGTCTCTGCCGCTGATTCCAAGAAAGCCATGTCAGCTACAAAGCTTGCTGAGCTTGCGCTAATTGACCCCAAACGTGCAAAGAGGATATGGGCAAATAGACAATCAGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTACTGCTGAGAACAGTGAACTAAAGCTGCGATTGCAGACAATGGAGCAGCAGGTTCACCTACAAGATGGTAAGGACCTCATCTGTAATTTCATTTTTCAGGTGACTGCACATTATGGTTGCCTTCTCTTAGTTTTCATCTAA | 987 | 45.19 | MEKDKPQSHSGGFLPPSSRYSGLSPTGSSFNGKSEATSSSMSLPPMASGANSDSSQFSRGMSTDSNRFSHDISRMPDNPPRNIGHRRAHSEILTLPDDICFDSDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSTATSAIQVGESSSAVRSTPTSEIGAATSKDDTAVGLKERSRVRHQHSQSMDGLTTIKPEMLVSGSEEVSAADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDGKDLICNFIFQVTAHYGCLLLVFI | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 12019986 | 12027749 | - | Tan0011396.2 | Tan10g1193 | 765987 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g1193 | 328 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
Tan10g1193 | 328 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 226 | 289 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g1193 | 328 | MobiDBLite | consensus disorder prediction | 11 | 69 | - | - | |
Tan10g1193 | 328 | Coils | Coil | 244 | 299 | - | - | |
Tan10g1193 | 328 | Gene3D | - | 227 | 279 | - | - | |
Tan10g1193 | 328 | CDD | bZIP_plant_RF2 | 229 | 278 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g1193 | 328 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 69 | 305 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Tan10g1193 | 328 | FunFam | probable transcription factor PosF21 | 227 | 280 | - | - | |
Tan10g1193 | 328 | SUPERFAMILY | Leucine zipper domain | 228 | 279 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g1193 | 328 | SMART | brlzneu | 224 | 288 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan10g1193 | 328 | Pfam | bZIP transcription factor | 228 | 282 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan10g1193 | Tan-Chr10:12019986 | Tan10g1196 | Tan-Chr10:12019986 | 1.40E-173 | dispersed | |
Tan10g1192 | Tan-Chr10:12019986 | Tan10g1193 | Tan-Chr10:12019986 | 3.50E-158 | tandem | |
Tan10g1193 | Tan-Chr10:12019986 | Tan10g1194 | Tan-Chr10:12019986 | 5.60E-159 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28570 | PF00170 | bZIP_1 | 9.30E-09 | CL0018 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g1193 | - | - | - | 0.0 |