Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1202 ATGGAGAAGGACAAACCCCCAAGCCATTCTGGTGGATTTCTTCCCCCATCGAGTCGTTACTCGGCTCTTTCACCAACTGCAAGCAGTTTCAATGGAAAATCTGAGGCAGCTTCGTGTTCAATGTCGCTTCCTCCAATGGCTCCGAGTGCTAATTCTTCCGATTCGGGTCAATTTGGCCGTGGAATGTCAAGTGATTCCAATCGGTTCAGCCATGATATTAGTCGGATGCCTGATAACCCGCCGAGAAATATTGGTCATAGACGTGCCCATTCAGAAATACTGACCCTTCCTGATGATATTTGTTTTGACAGTGATCTTGGTATCATTGGTGGTGCTGATGGGCCTTCCTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGATAAATTCAATTCTTCGACTGCAACCTCTGCAGTACAAGTTGGCGAGTCATCTTCTGCTGTTGTAGAACCGAGATCAAATCCTACTTCAGCAATTGGAGCTGCAACTTCCAAGGATGATGCTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGGCACCAGCACAGCCAGTCCATGGATGGCTTAACAACCATCAAGCCTGAGATGCTTGTCTCCGGGTCTGAAGAAGTCTCTGCAGCTGATTCCAAGAAAGCCATGTCAGCTACAAAGCTTGCTGAACTTGCACTAATTGACCCCAAACGTGCAAAGAGGATATGGGCAAATAGACAGTCAGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACCGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTACTGCTGAGAACAGTGAACTAAAGCTGAGGTTGCAGACAATGGAGCAGCAGGTTCACCTACAAGATGCTCTAAATGAAGCACTGAAAGAGGAAATTCAACATTTGAAAATATTGACTGGCCAAGCAATCCCAAATGGTGGATCAATGTCAAACTTTGCTTCCTTTGGAGCTGGCCAACAATTTTACCCAAACAATCAAGCAATGCACACTTTGTTAACTGCTCAGCAATTTCAGCAACTTCAAATCCACTCACAGCAGCAGCAGCAGCAGCATTTTCAGTACCATCAGCTGCATCATCAGCTTCAGCAGCAACCAACTGGAGACATCAAAATGAAAGGATCGACTTCTTCTCCGAGTCTGAAAGACAACAACACATCAGATACATCCTCTCCTGCTTGTTGA 1260 45.63 MEKDKPPSHSGGFLPPSSRYSALSPTASSFNGKSEAASCSMSLPPMAPSANSSDSGQFGRGMSSDSNRFSHDISRMPDNPPRNIGHRRAHSEILTLPDDICFDSDLGIIGGADGPSFSDDTEEDLLSMYLDMDKFNSSTATSAVQVGESSSAVVEPRSNPTSAIGAATSKDDAAVGLKERPRVRHQHSQSMDGLTTIKPEMLVSGSEEVSAADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNEALKEEIQHLKILTGQAIPNGGSMSNFASFGAGQQFYPNNQAMHTLLTAQQFQQLQIHSQQQQQQHFQYHQLHHQLQQQPTGDIKMKGSTSSPSLKDNNTSDTSSPAC 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12104647 12109815 - Tan0002397.1 Tan10g1202 765996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1202 419 FunFam probable transcription factor PosF21 231 284 - -
Tan10g1202 419 CDD bZIP_plant_RF2 233 282 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g1202 419 MobiDBLite consensus disorder prediction 14 70 - -
Tan10g1202 419 MobiDBLite consensus disorder prediction 376 419 - -
Tan10g1202 419 Pfam bZIP transcription factor 232 286 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g1202 419 Coils Coil 248 317 - -
Tan10g1202 419 MobiDBLite consensus disorder prediction 1 86 - -
Tan10g1202 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 230 293 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g1202 419 SMART brlzneu 228 292 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan10g1202 419 Gene3D - 231 284 - -
Tan10g1202 419 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 70 392 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Tan10g1202 419 SUPERFAMILY Leucine zipper domain 232 283 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0743 Tan-Chr2:6982572 Tan10g1202 Tan-Chr10:12104647 4.10E-40 dispersed
Tan04g0726 Tan-Chr4:6260926 Tan10g1202 Tan-Chr10:12104647 1.90E-06 dispersed
Tan10g1194 Tan-Chr10:12019986 Tan10g1202 Tan-Chr10:12104647 2.60E-193 dispersed
Tan10g1195 Tan-Chr10:12019986 Tan10g1202 Tan-Chr10:12104647 2.60E-193 dispersed
Tan10g1202 Tan-Chr10:12104647 Tan11g1147 Tan-Chr11:9086250 3.10E-45 dispersed
Tan10g1196 Tan-Chr10:12019986 Tan10g1202 Tan-Chr10:12104647 6.40E-147 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28574 PF00170 bZIP_1 1.00E-08 CL0018 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1202 - - - 0.0