Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1221 ATGAAATCTTCTCTTCTTCCCATTTTCAAATTCCCCGCCATTGTTTTCCCCAGATTCTTCTCCACCACCACCGCCGCCGCCCTCGTTTCCTCCACCATGTCCAGTTCCGATCACTCTCCCGCCGCCTTCGACAGACCTCGCTCCGTCATCAAGAAGATTCTCGCTAAACTCCAGCACGAAGGCGATGGCGCCGTCGTTCGTCGAGGCATCGGAAGGAGTGATTTGAAGAATCTGGATCCATTTCTGATGCTCGATGATTTTTCCGTTAGTCCGCCGGCTGGATTCCCCGATCATCCTCACAGAGGTTTTGAGACAGTGACGTACATGTTACAGGGAGGAATTACTCATCAAGATTTTGCTGGCCACAAGGGTACAATCAGAACAGGGGATGTCCAGTGGATGACAGCAGGAAGAGGTATAATCCATTCTGAAATGCCTGCTGGTGAAGGATCTCAAAAGGGTTTGCAGCTTTGGATCAATCTTGCATCCCATGACAAAATGATGGAACCACGGTATCAAGAGATCCCAAGCGACAACATTCCGAGGGCGGAGAAAGACGGTGTTGAAGTTCGTGTCATAGCAGGAGAGTCCATGGGAGTCCATTCTCCAATCTACACTCGAACTCCGACTATGTACCTCGACTTCACATTGAAACCAAGAGCTCAAGTGCATCAGAGCATCCCAGAGACGTGGACTTCTTTCGTGTACATAATCGACGGGGAAGGGGTGTTCGGGTCGTCGAACTCGTCTCGGGTGGCTGCTCACCATGTCCTAGTACTAGGACCTGGAGATGGTTTGAGTGTTTGGAACAGATCTTCAAAGCCATTGAGATTTGTTTTGATAGCAGGGAAGCCACTGAATGAGCCAATTGTTCAATATGGACCATTTGTGATGAACTCACAATCTGAAATTGACCAAGCAATTGAGGACTACCACTATGGCAAAAATGGGTTTGAAATGGCAAAGTATTGGAGATCCCAGTGA 984 48.68 MKSSLLPIFKFPAIVFPRFFSTTTAAALVSSTMSSSDHSPAAFDRPRSVIKKILAKLQHEGDGAVVRRGIGRSDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGSQKGLQLWINLASHDKMMEPRYQEIPSDNIPRAEKDGVEVRVIAGESMGVHSPIYTRTPTMYLDFTLKPRAQVHQSIPETWTSFVYIIDGEGVFGSSNSSRVAAHHVLVLGPGDGLSVWNRSSKPLRFVLIAGKPLNEPIVQYGPFVMNSQSEIDQAIEDYHYGKNGFEMAKYWRSQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12783034 12785384 - Tan0015439.1 Tan10g1221 766015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1221 327 CDD cupin_pirin_C 209 285 - -
Tan10g1221 327 Pfam Pirin 66 159 IPR003829 -
Tan10g1221 327 PIRSF Pirin 45 325 IPR012093 -
Tan10g1221 327 Gene3D Jelly Rolls 181 286 IPR014710 -
Tan10g1221 327 FunFam pirin 60 192 - -
Tan10g1221 327 CDD cupin_pirin_N 64 161 - -
Tan10g1221 327 Gene3D Jelly Rolls 60 312 IPR014710 -
Tan10g1221 327 Pfam Pirin C-terminal cupin domain 212 317 IPR008778 -
Tan10g1221 327 SUPERFAMILY RmlC-like cupins 47 325 IPR011051 -
Tan10g1221 327 PANTHER PIRIN-RELATED 33 327 IPR012093 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3147 Tan-Chr1:85019506 Tan10g1221 Tan-Chr10:12783034 5.20E-119 dispersed
Tan01g3148 Tan-Chr1:85019506 Tan10g1221 Tan-Chr10:12783034 4.10E-109 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1221 K06911 - csv:101205861 610.527