Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1258 ATGGGGTTATTCTTGTGGGTGGATTTGATGCTTTTGTTCTTGAAGAAGATGTGTGGCTGGAGAGGGGGATTGTTAGTGGAATTGGTTGTTTTTGCAGATATGTGTTTATTGGTGTCTGGTTTAGGTTCTATGTCTTCTGTTGCTGTTTCTTATGGTGAGAAAGGGCCTGTTTTCTGTGGTTTAAAGTCAGATGGGTCTCATCTTGTGAGCTGTTTTGGTTCAAATTCAGCCATAACTTATGGAACCCCTTCTCATTTCCCATTCATTGGTCTCACTGCTGGTGATGGTTTTGTTTGTGGGCTTCTTTTGGATTCTAACCAACCTTACTGTTGGGGAAGCAGTGGCTATGTTCAAATGGGTGTTCCTCAGCCCATGATCAAAGGAGCTCAATACCTGGAAATCAGTGCTGGTGATTACCATCTCTGTGGACTCCGAACGCCTTTGACTGGAAGGCGTAGGAACACGTCTTTTGTTGATTGTTGGGGTTACAACATGACGAGAACCTTTGCATTTGATGGGCCGATTGAATCGATCTCTGCAGGGTCTGAGTTCAACTGTGGACTGTTTTCTCTTAATAGAACTGTTTTCTGTTGGGGTGATGAGACGAGCAGCCGGGTAATTAGTTTGATACCTCAAGATATGAGGTTTCAAAAGATTGCGTCTGGTGGATATCATGTTTGTGGGATTTTAGAGGGCGCGAAGGCGAGAGCTTTCTGTTGGGGAAGGAGCTTAGACATTGAAGAAGAGATCTCAGTTGCATATTCTGGTGAAGGAAATGTAGACTTGGTCCCAGTTGATCCATTAGACTCTGTTGTTGGGGGCAAATTCCATGCTTGTGGAATCAAGAGCTTGGACCGTGGTGTGATTTGTTGGGGTTTTACGGTAAAACCGAGTACTCCAGCACCGGATGGGATTAAAGTTTACGACGTTGCAGCCGGAGATTACTTCACCTGTGGAATTCTAGCTGAAAAATCTCTCCTGCCTGTTTGCTGGGGTCTTGGATTTCCTACTTCTCTACCTTTAGCTGTCTCACCTGGAATCTGTAAAGCAACTCCTTGTGCTCCTGGTTTCTATGAAATAAGCCAAGACAATGCTCGCTGTAAGTCGCCGAGTTTTCACGTGTGTATGCCCTGCAGTACTACTTGCCCTCCCGAGATGTACCAAAAATTTGAGTGCTCCTTAAAATCTGATAGGCAGTGTGAATATAACTGCTCAAGTTGCTTTTCTTCTGAATGTTCCTCAAACTGCTCATCCATGAATTCAAATGGTATGATGGGGAAGAAGAACGAGAAGTTCTGGTCAATGCAGCTTCCAGCTCTTGTAGCTGAGATTGCTTTTGCTGTGTTTTTAGTAGCTATTGTGTCTTTAACTGCAATCTTATATGTTCGATACAAGTTACGTAACTGCCATTGCTCAGGAAAGGAGTTGAAGTCCAAGAAAAACAAAGGGACTGCCTCTTCCTTCCAGAAGGAAAACTACAAAATACGCCCCGACTTAGACGAGCTAAAGATAAGAAGGGCTCAGATGTTCACCTACGAAGAACTCGAGAGAGCGACATGTGGGTTTAAGGAAGAGTCTATCGTGGGAAAGGGAAGTTTCTCTTGTGTTTTTCGAGGTGTTTTGAAGGATGGAACGGTTGTAGCAGTCAAACGGGCTATAATGTCCCCCAACATGCAGAAGAATTCAAAAGAGTTTCACACTGAACTTGACTTACTCTCAAGATTAAACCATGCCCATTTGCTTAATCTGCTTGGTTATTGTGAAGAAGGTGGAGAGAGGCTTTTAGTTTATGAGTTCATGGCTCATGGTTCCTTACATCAGCACCTCCATGGCAAGAACAAGGCCTTGAAAGAGCAACTAGATTGGGTAAGAAGGGTCACAATTGCAGTCCAAGCAGCAAGGGGAATTGAATACTTGCACGGCTATGCTTGTCCTCCCGTCATTCATCGAGACATCAAGTCGTCAAACATTCTCATCGATGAAGAGCATAATGCTCGAGTCGCTGATTTTGGCTTGTCATTGTTGGGACCGACTGATAGTAGCTCTCCATTAGCTGAGCTACCTGCTGGGACTCTTGGCTATCTAGATCCTGAATACTATAGACTTCACTACCTTACGACCAAGTCCGATGTCTATAGCTTTGGTGTTTTGCTACTAGAAATTCTCAGTGGTAGAAAAGCCATTGATATGCAATATGAAGAAGGGAACATAGTAGAATGGGCAGTGCCTCTGATCAAATCTGGAGATATCTCTGCAATTTTAGATCCGATACTAAAACCGCCATCCGATATTGAGGCCTTGAAGAGGATTGCGAACGTAGCCTGTAAATGTGTGAGGATGAGGGCGAAGGAGAGGCCATCAATGGACAAAGTGACAACTGCATTGGAGCGTGCTCTTGCCCAATTAATGGGAAGCCCATGTAACGAACAACCAATCTTACCAACTGAGGTGGTTTTGGGAAGCAGCAGACTACACAAAAAGTCATCCCAAAGATCATCAAACCGTTCGGTCTCTGAAACGGATATAGCAGAAGCTGAGGATCAAAGGTTCGAATTCAGAGCTCCGTCGTGGATTACATTCCCAAGCGTGACGTCGTCCCAGAGGAGGAAATCCTCAGTGTCAGAAGCAGATGTTGATGGAAAGAATTTGGAAGGAAGAAATGTAGGGAACTGTGGAGGAGTTGGGGATGGATTGAAGAGTTTAGAGGAAGAGATTGGGCCTGCTTCCCCTCAGGAAAAGTTGTTCTTGGAGCACAATTTCTAA 2763 44.48 MGLFLWVDLMLLFLKKMCGWRGGLLVELVVFADMCLLVSGLGSMSSVAVSYGEKGPVFCGLKSDGSHLVSCFGSNSAITYGTPSHFPFIGLTAGDGFVCGLLLDSNQPYCWGSSGYVQMGVPQPMIKGAQYLEISAGDYHLCGLRTPLTGRRRNTSFVDCWGYNMTRTFAFDGPIESISAGSEFNCGLFSLNRTVFCWGDETSSRVISLIPQDMRFQKIASGGYHVCGILEGAKARAFCWGRSLDIEEEISVAYSGEGNVDLVPVDPLDSVVGGKFHACGIKSLDRGVICWGFTVKPSTPAPDGIKVYDVAAGDYFTCGILAEKSLLPVCWGLGFPTSLPLAVSPGICKATPCAPGFYEISQDNARCKSPSFHVCMPCSTTCPPEMYQKFECSLKSDRQCEYNCSSCFSSECSSNCSSMNSNGMMGKKNEKFWSMQLPALVAEIAFAVFLVAIVSLTAILYVRYKLRNCHCSGKELKSKKNKGTASSFQKENYKIRPDLDELKIRRAQMFTYEELERATCGFKEESIVGKGSFSCVFRGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKNKALKEQLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDISAILDPILKPPSDIEALKRIANVACKCVRMRAKERPSMDKVTTALERALAQLMGSPCNEQPILPTEVVLGSSRLHKKSSQRSSNRSVSETDIAEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNLEGRNVGNCGGVGDGLKSLEEEIGPASPQEKLFLEHNF 920
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14197040 14201009 - Tan0012340.1 Tan10g1258 766052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1258 920 ProSiteProfiles Protein kinase domain profile. 522 799 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1258 920 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 352 400 IPR001368 GO:0005515(InterPro)
Tan10g1258 920 FunFam Receptor protein kinase CRINKLY4 600 802 - -
Tan10g1258 920 MobiDBLite consensus disorder prediction 863 896 - -
Tan10g1258 920 Gene3D - 42 204 IPR009091 -
Tan10g1258 920 MobiDBLite consensus disorder prediction 823 842 - -
Tan10g1258 920 FunFam Serine/threonine-protein kinase-like protein CR4 40 207 - -
Tan10g1258 920 Gene3D Phosphorylase Kinase; domain 1 493 599 - -
Tan10g1258 920 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 36 844 - -
Tan10g1258 920 FunFam serine/threonine-protein kinase-like protein CCR1 492 599 - -
Tan10g1258 920 CDD STKc_IRAK 528 797 - -
Tan10g1258 920 MobiDBLite consensus disorder prediction 823 839 - -
Tan10g1258 920 SMART serkin_6 522 799 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1258 920 SUPERFAMILY Protein kinase-like (PK-like) 504 795 IPR011009 -
Tan10g1258 920 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524(InterPro)
Tan10g1258 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g1258 920 Gene3D Transferase(Phosphotransferase) domain 1 600 807 - -
Tan10g1258 920 SUPERFAMILY RCC1/BLIP-II 41 293 IPR009091 -
Tan10g1258 920 Gene3D - 205 348 IPR009091 -
Tan10g1258 920 Pfam Protein tyrosine and serine/threonine kinase 525 794 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1054 Tan-Chr3:66803726 Tan10g1258 Tan-Chr10:14197040 3.40E-82 dispersed
Tan04g2384 Tan-Chr4:82598431 Tan10g1258 Tan-Chr10:14197040 3.50E-66 dispersed
Tan10g1258 Tan-Chr10:14197040 Tan10g1763 Tan-Chr10:50378493 1.60E-81 dispersed
Tan10g1258 Tan-Chr10:14197040 Tan02g0176 Tan-Chr2:1551200 1.00E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68143 PF07714 PK_Tyr_Ser-Thr 5.30E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1258 - - - 0.0