Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1269 ATGGCTTTCCTCTCCCTTTTCGCCCTTTCCCTTTTGGGATCCATGGCGTTTCTTCTTCACAATTCCATTGCCTTCAATGCCCTTTCTCCTCAACTCAACGACGACATTCTCGGCTTGATCGTCTTCAAGTCCGACCTCCACGACCCCTCTTCCTTTCTCGCCTCTTGGAATGAAGACGACGACTCCCCTTGTTCTTGGAACTTCATTAAATGCAACCCCATTAATGGCAGAGTTTCTGAGGTTTCCATTGATGGCTTGGGCTTAACTGGGAGAATCGGAAGAGGGCTTGAGAAGTTGCAGCATCTCAAGGTATTGTCCATTTCTAGCAATAATTTTACCGGCAATGTTAGTCCCGAGCTTGTTCTTCCCTCCAGTCTCGAGAGAGTTAATTTCAGTCGGAATAATCTCTCTGGCCGAATTCCCAGCTCTCTAATCGATATGTCTTCCATTAGATTTCTTGATTTTTCTCATAATCTCTTCTCTGGGCCTCTTCCTGATGATTTGTTTGTCAATTGCTCTTCGCTTCATTATCTCTCTCTTGCGTCTAATGTCCTTGAAGGCCCTGTCCCCAACACATTGCCCACAAGGTGTTTGTATTTAAACGCTCTCAATCTTTCAACCAATCTCTTCTCTGGTAGCTTGGATTTTTCATCTTTTACAAGGCTCAGGACATTGGATCTCTCAAACAACGCCCTCTCTGGATATTTCCCACAAGGGATTTCGGCCATTCATAACCTGAAAGAGCTCAAGTTGCAGAGCAACCAATTCTCAGGGCCACTGCCTGCAGATTTAGGATTATGCCTCCACTTAGCTACACTAGATGTCAGCCGAAACCGCCTCACCGGACCGTTACCAGAGTCCATGAAACTCTTAACCTCCTTAACCCTCTTCAACATAGGATTCAACACGTTTTCAGGGGAGTTCCCACAGTGGATTGGGAACATGACAAGTTTAGAATATGTGGATTTCTCAAGCAATGACTTGACTGGCAGCCTTCCTTTAGCAATGGGTGGATTGAGATCTGTCAAATACATGAGTTTTTCAAACAACAGGATCTCTGGGAACATCCCTGAGACATTGAAGGACTGTTCAAAGCTGTGTGTGATAAAGCTTGAAGGGAACAGTTTCAATGGGGGGCTGCCAGAGGGGCTGTTTGAACTGGGTTTGGAGGAGATGGATTTGTCTAAGAATGAGCTGATTGGTTCAATCCCAGTAGGATCAAGCAAACTGTATGAGAAGCTAACAAGAATGGACCTGTCAAGGAACAAATTAGAAGGGAACTTTCCAGCAGAAATGGGATTGTATAGAAATTTGAGGTACTTGAATCTGTCATGGAACAATTTTAAAGCAAAGATTCCACCAGAAATGGGACTGTTTCAGAATTTGACTGTGTTGGACATTAGAAACAGTGAACTGCATGGATCAATTCCTGGAGAATTGTGTGATTCAGGGAGTTTGGGGATTCTTCAGCTTGATGGAAACTCATTGATTGGTTCAATTCCTGTTGAGATTGGAAACTGTCTCTCACTTTACTTACTGAGTTTATCCCACAACAATTTAAGTGGAGCAATTCCAAAGTCAATATCAAAGCTAAGGAAGCTAGAGATTCTAAGATTAGAATCAAATGAACTAAGTGGAGAAATACCACAAGAGCTTGGAATTCTTGAAAATCTGCTTGCTGTTAACATTTCATTCAATATGCTAACAGGCAGGCTCCCTGTTGGTGGCATTTTTCCAAGCTTGGATCAAAGTGCTTTGCAAGGAAACTTAGGCATTTGCTCCCCTTTGCTTAAAGGCCCTTGTAAAATGAATGTCCCTAAGCCCCTTGTTCTTGACCCTAATGCTTATCACTATCCCAACCAAATGGGAGGCCAATCCACAAGAAATAAGCCTTCACAATACTCTAATCCTTCCCATCATGTCTTCTTCAGTATCTCTGCCATTGTTGCCATTTCTGCTGCCACTTTGATTGCCATTGGAGTGCTTGTGATCACCTTGTTGAATGTCTCCACTCGAAGGAGATCGCTTGCGTTTGTTGATCATGCCTTGGAAAGCATGTGCTCGAGCTCTTCGAAATCGGGGACTGTGACTTCTGGTAAGCTTATTTTGTTTGATTCGAACTCGAGGGTCTCGCCTAACTGGGTTAGTAACCATGAAGCCTTGCTGAATAAGGCCTCTGAGATTGGTGCTGGAGTTTTTGGAACGGTTTATAAGGTTTCGTTGGGAGATCAAGGAGGAAGATCAGATGTGGCTATCAAGAAGCTTGTGAAATCAAACATGATTCAAAATCCTGAGGACTTCGACCGCGAAATCCGAATCTTGGGGAAGGTCAAACACTCGAATTTGATCAGCTTAAAGGGTTACTACTGGACTGTTCAAACTCAGCTCTTGCTAATGGAGTATGCCACCCATGGAAGTCTTCAAACTCATCTCCATGGAAGGCTTCCTTCAGCTCCACCACTCTCTTGGGCAAACAGGTTGAAGATTGTGCTAGGGACAGCCAAAGGACTAGCACATTTACACCACTCATTCCGCCCGCCGATCGTTCACTACAATCTCAAACCAAGCAACATCTTGCTCGACGAAAACTTCAACCCGAAGATCTCCGATTACGGGTTGGCAAGGCTGCTAACGAAGCTCGACAAGCACGTCATGAACAACAGATTCCAAAGTGCATTGGGGTATGTCGCACCAGAGCTGGCGTGCCAGAGCATACGGGTGAACGAGAAATGCGACGTACACGGGTTCGGGGTGATGATTCTGGAGATCGTGACGGGACGAAGGCCGGTGGAGTATGGAGAAGACAATGTGGTAATATTGACAGACCATGTGAGGTATTTGCTAGAGAGGGGGAATGTGTTGGATTGTGTAGATCCAAGCATGAGTGAATATTCAGAGGATGAAGTTGTGCCAATTCTGAAACTGGCTTTGGTATGCACTTCTCAAATTCCTTCAAGCAGGCCTTCAATGGCGGAAGTGGTGCAGATTCTGCAAGTCATCAAGGCTCCAGTTCCACAAAGAATAGAAGCATTTTGA 3036 44.7 MAFLSLFALSLLGSMAFLLHNSIAFNALSPQLNDDILGLIVFKSDLHDPSSFLASWNEDDDSPCSWNFIKCNPINGRVSEVSIDGLGLTGRIGRGLEKLQHLKVLSISSNNFTGNVSPELVLPSSLERVNFSRNNLSGRIPSSLIDMSSIRFLDFSHNLFSGPLPDDLFVNCSSLHYLSLASNVLEGPVPNTLPTRCLYLNALNLSTNLFSGSLDFSSFTRLRTLDLSNNALSGYFPQGISAIHNLKELKLQSNQFSGPLPADLGLCLHLATLDVSRNRLTGPLPESMKLLTSLTLFNIGFNTFSGEFPQWIGNMTSLEYVDFSSNDLTGSLPLAMGGLRSVKYMSFSNNRISGNIPETLKDCSKLCVIKLEGNSFNGGLPEGLFELGLEEMDLSKNELIGSIPVGSSKLYEKLTRMDLSRNKLEGNFPAEMGLYRNLRYLNLSWNNFKAKIPPEMGLFQNLTVLDIRNSELHGSIPGELCDSGSLGILQLDGNSLIGSIPVEIGNCLSLYLLSLSHNNLSGAIPKSISKLRKLEILRLESNELSGEIPQELGILENLLAVNISFNMLTGRLPVGGIFPSLDQSALQGNLGICSPLLKGPCKMNVPKPLVLDPNAYHYPNQMGGQSTRNKPSQYSNPSHHVFFSISAIVAISAATLIAIGVLVITLLNVSTRRRSLAFVDHALESMCSSSSKSGTVTSGKLILFDSNSRVSPNWVSNHEALLNKASEIGAGVFGTVYKVSLGDQGGRSDVAIKKLVKSNMIQNPEDFDREIRILGKVKHSNLISLKGYYWTVQTQLLLMEYATHGSLQTHLHGRLPSAPPLSWANRLKIVLGTAKGLAHLHHSFRPPIVHYNLKPSNILLDENFNPKISDYGLARLLTKLDKHVMNNRFQSALGYVAPELACQSIRVNEKCDVHGFGVMILEIVTGRRPVEYGEDNVVILTDHVRYLLERGNVLDCVDPSMSEYSEDEVVPILKLALVCTSQIPSSRPSMAEVVQILQVIKAPVPQRIEAF 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14433395 14439892 - Tan0016848.1 Tan10g1269 766063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1269 1011 ProSitePatterns Protein kinases ATP-binding region signature. 728 754 IPR017441 GO:0005524(InterPro)
Tan10g1269 1011 Gene3D Ribonuclease Inhibitor 196 290 IPR032675 -
Tan10g1269 1011 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Tan10g1269 1011 Pfam Protein kinase domain 724 995 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1269 1011 Pfam Leucine rich repeat 389 448 IPR001611 GO:0005515(InterPro)
Tan10g1269 1011 Gene3D Transferase(Phosphotransferase) domain 1 803 1007 - -
Tan10g1269 1011 ProSiteProfiles Protein kinase domain profile. 722 1000 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1269 1011 SUPERFAMILY L domain-like 309 583 - -
Tan10g1269 1011 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 999 IPR050647 -
Tan10g1269 1011 FunFam Inactive leucine-rich repeat receptor-like protein kinase 214 310 - -
Tan10g1269 1011 CDD STKc_IRAK 728 998 - -
Tan10g1269 1011 Pfam Leucine Rich Repeat 509 531 IPR001611 GO:0005515(InterPro)
Tan10g1269 1011 Pfam Leucine Rich Repeat 342 363 IPR001611 GO:0005515(InterPro)
Tan10g1269 1011 Pfam Leucine Rich Repeat 221 241 IPR001611 GO:0005515(InterPro)
Tan10g1269 1011 Pfam Leucine Rich Repeat 245 265 IPR001611 GO:0005515(InterPro)
Tan10g1269 1011 Pfam Leucine Rich Repeat 533 553 IPR001611 GO:0005515(InterPro)
Tan10g1269 1011 Pfam Leucine Rich Repeat 125 145 IPR001611 GO:0005515(InterPro)
Tan10g1269 1011 Pfam Leucine Rich Repeat 317 339 IPR001611 GO:0005515(InterPro)
Tan10g1269 1011 Pfam Leucine Rich Repeat 269 289 IPR001611 GO:0005515(InterPro)
Tan10g1269 1011 SUPERFAMILY L domain-like 51 380 - -
Tan10g1269 1011 Gene3D Ribonuclease Inhibitor 291 607 IPR032675 -
Tan10g1269 1011 SUPERFAMILY Protein kinase-like (PK-like) 726 1004 IPR011009 -
Tan10g1269 1011 FunFam Leucine-rich repeat receptor-like protein kinase 32 191 - -
Tan10g1269 1011 ProSiteProfiles Leucine-rich repeat profile. 437 459 IPR001611 GO:0005515(InterPro)
Tan10g1269 1011 FunFam Inactive leucine-rich repeat receptor-like protein kinase 311 604 - -
Tan10g1269 1011 Gene3D Ribonuclease Inhibitor 33 195 IPR032675 -
Tan10g1269 1011 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 802 1006 - -
Tan10g1269 1011 Gene3D Phosphorylase Kinase; domain 1 710 801 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1965 Tan-Chr1:21772237 Tan10g1269 Tan-Chr10:14433395 1.10E-81 dispersed
Tan08g2242 Tan-Chr8:73945426 Tan10g1269 Tan-Chr10:14433395 7.60E-23 dispersed
Tan10g1269 Tan-Chr10:14433395 Tan05g2077 Tan-Chr5:71201561 7.80E-50 dispersed
Tan10g1269 Tan-Chr10:14433395 Tan11g0336 Tan-Chr11:2634873 3.20E-27 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68144 PF00069 Pkinase 3.70E-41 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1269 - - - 0.0