Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1324 ATGATGGAAAGTAATTTCCCAAATTTTCTCTCAACTTCATCCTCTTCAACCTCCCTTTCTCTCCACCAAATGCTGATTTCTCGAGCTTCCGAACTCGCCGGAATCCATGGAGACCATTTTCGGCAGCCATCCGTCTCCGATGGGTTCCCGTTGTTTCGTCCCGTTTCGGGGAACGACATGTCGGTCGATGCAACGAGTAGTATGAAGGACGACGTGATTTCACTTAGTAAAAGCTTCCATGTTGATGGGTCAGCTAGGGTTGGAGTGGATGGGTTGGAGAAGAGGAAGACCGGCGGGGCGGGAGCGACGACGACAGCGGGGATGGCGGCGGGACGGGGAGATTATGATAAGAAAAAGAAGACGAGAAGCCGGAGATTTGCCTTTCAAACGAGGAGTCAAGTTGATATTCTTGATGATGGTTATAGATGGAGAAAGTATGGACAGAAGGCTGTGAAGAACAACAAATTCCCAAGAAGCTACTATAGATGTACACACCAAGGTTGCAAAGTGAAGAAGCAAGTGCAAAGGCTAACAAGAGATGAAGGTGTGGTTGTGACAACTTATGAAGGCATTCACTCTCATCCCATTGAGAAATCTACTGATAACTTTGAGCATATTTTGAGTCAGATGCAAATTTACACTTCTTATTGA 651 46.24 MMESNFPNFLSTSSSSTSLSLHQMLISRASELAGIHGDHFRQPSVSDGFPLFRPVSGNDMSVDATSSMKDDVISLSKSFHVDGSARVGVDGLEKRKTGGAGATTTAGMAAGRGDYDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTSY 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15803838 15806683 - Tan0011385.1 Tan10g1324 766118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1324 216 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 102 197 IPR044810 GO:0003700(InterPro)
Tan10g1324 216 SMART WRKY_cls 137 196 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan10g1324 216 Pfam WRKY DNA -binding domain 138 195 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan10g1324 216 FunFam WRKY transcription factor 57 123 197 - -
Tan10g1324 216 Gene3D WRKY domain 121 196 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan10g1324 216 SUPERFAMILY WRKY DNA-binding domain 129 196 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan10g1324 216 ProSiteProfiles WRKY domain profile. 132 197 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0087 Tan-Chr7:3097719 Tan10g1324 Tan-Chr10:15803838 9.90E-46 dispersed
Tan07g0088 Tan-Chr7:3097719 Tan10g1324 Tan-Chr10:15803838 1.40E-41 dispersed
Tan10g0191 Tan-Chr10:1889244 Tan10g1324 Tan-Chr10:15803838 8.20E-29 dispersed
Tan10g1324 Tan-Chr10:15803838 Tan11g0132 Tan-Chr11:1311187 1.30E-42 dispersed
Tan10g1324 Tan-Chr10:15803838 Tan06g0714 Tan-Chr6:5453674 3.40E-27 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28581 PF03106 WRKY 1.20E-25 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1324 - - - 0.0