Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1341 ATGGAGAAAAACCCACCCCCAGAAAAGTCTGAAAGCTTTTCAAAAAATTTCAATAGAAGAATTGCAAATTTGGGCTCACCTCGCCGGACTCCCGATGCTGCCGCCTCTGATACTAAATCAGAACCTGAAAAGCTTGCCGATCGAGATGATGATGCCTTCATTGAAGACCCTCTTTCTGAATCTGAAACCGCCTTGATTTTCGAAGAGGTTGATCAATTCCTCGCCACTTTGCCCAATGCCGGAGACGGCAGATCGAATCTCATCCTTGATGTTCCGACCTCCGTTATTTCCTTAGCCGAAATGGTGGACTCCATGACCTCCAGGTACAAGTCTACCAAAAATCCGGCCAAGCTCGGTAGAGATCCTGACCGAGATGCTTCGTTTTTCGAAGCTCTTAATCGCATTTCAAACATTGCGATTAAATTAAGCGAATTCCCTTCCACTACTGCCTCGATTCCTTCGCTCAATCGGACCACCACGGCTCTGCAGCGAGCCATGTCGTTATTGGACGAAGAATTCGAAGGCCTTCTGAAAGAATGCAAACATCGAGAGTTAGATTCGAAATCTGATAGGAAAGCGTCGAAGCAATCGTCGTTCAAAACAATCAATGAATCAGCAGATCAACATCACAGCGTCCTTCCTGAATCATCCGAGCCCGATTCTGCTAAGGAAGAGGAATTCCCCTCTTTCTCGCCGGAAACTGTGTCGAACATGAAAAGAATCGCCGGAACAATGATCTCCGCCGGCTACGAGAAGGAATGTTGTATGAGTTACAGCTTCCTCCGGCAGAGCTCCTTCAAAGGAATATTGAACAAGCTCGGGTACGAAAGCATTAGCATAGACGACATTCAGAAAATGCAATGGGAGACTCTTCAATCGGAAATCGACAAATGGATCGCCGTTGTCAAGAAATGCTCAAAATCTCTGTTCCCAGGCGAGTGGAAGCTCTGTGACTCTCTTTTCACCGATCATCCCTTCATTTCTCATACGCTCTTCAGCAATTTAACAAGAGCAGTAGTCATCAAGCTTCTCAACTTCGCAAATGCCGTCGTTTTAACAAAGCGATCGGCGGAGAAGATGTTCAAATTACTCGACATGTACGAGACCCTCCGCGATTTAATTCCGGCCATCAATGGCTTCCCTGAAAATTGCAGAACAGAACTAATTTCAGAAGCGGAAGGGGCAAAAAGAGGTATAGGCGAAGCAATAGTCGGCATTTTCTACGACCTAGAGAACTCAATCAAAAGCGACAACGCGAAAATTCCAGTACCAGGAGGAGCAGTTCATCCATTGACGCGCTACATAATGAATTACCTAAAATACGCTTGCGAGTACAAAGAAACCCTAGAACAGGTGTTCCAATTCCTCGACCCTAAAATCGAAGAAGACCGACCAGCAAGAATGGACGAGAACGACGACGCGTCACCGAGAAAGTCTCAGCTCACGATTCAGATCTCAATGGTGATGGATCTGCTCGACGCAAATCTCACGATGCGATCGAAACTGTACCGCGACGCATCTCTTCGGTACATATTCCTGATGAACAACGGAAGGTACATAGTTCAGAAAATCAAAGGCTCAACTGGAATTACGCAATTGATGGGAGATCGATGGTGCCGAAAGCGATCGACGAATCTGCGACAGTACCACAAAAATTACCAGAGAGAAACATGGAGTAAGGTGCTGCAGTGCCTGAACCACGAAGGATTGCAGGTGAACGGGAAGATATCGAAGCCAATTTTGAAGGAGAGATTCAAAAGCTTCAACGCGATGTTTGACGAAATACACAAAACGCAGAGCAGTTGGGTGGTGAGCGACGAGCAGCTTCAATCGGAGCTCCGGATTTCGGTGTCGGCGGTGATGATTCCGGCGTACCGTTCGTTCGTGGGGAGATTCAAGCAACATTTCGATCCGGGAAGACAATCGGAAAAGTACATTAAGTATCAGCCTGAAGATATTGAAGGTTTGATCGATGACCTGTTTGATGGAAATACTGCGTCTATGGGGAGAAGGAAAACGTAG 2022 46.54 MEKNPPPEKSESFSKNFNRRIANLGSPRRTPDAAASDTKSEPEKLADRDDDAFIEDPLSESETALIFEEVDQFLATLPNAGDGRSNLILDVPTSVISLAEMVDSMTSRYKSTKNPAKLGRDPDRDASFFEALNRISNIAIKLSEFPSTTASIPSLNRTTTALQRAMSLLDEEFEGLLKECKHRELDSKSDRKASKQSSFKTINESADQHHSVLPESSEPDSAKEEEFPSFSPETVSNMKRIAGTMISAGYEKECCMSYSFLRQSSFKGILNKLGYESISIDDIQKMQWETLQSEIDKWIAVVKKCSKSLFPGEWKLCDSLFTDHPFISHTLFSNLTRAVVIKLLNFANAVVLTKRSAEKMFKLLDMYETLRDLIPAINGFPENCRTELISEAEGAKRGIGEAIVGIFYDLENSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVFQFLDPKIEEDRPARMDENDDASPRKSQLTIQISMVMDLLDANLTMRSKLYRDASLRYIFLMNNGRYIVQKIKGSTGITQLMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLNHEGLQVNGKISKPILKERFKSFNAMFDEIHKTQSSWVVSDEQLQSELRISVSAVMIPAYRSFVGRFKQHFDPGRQSEKYIKYQPEDIEGLIDDLFDGNTASMGRRKT 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16134711 16137100 + Tan0022402.1 Tan10g1341 766135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1341 673 MobiDBLite consensus disorder prediction 34 52 - -
Tan10g1341 673 Pfam Exo70 exocyst complex subunit C-terminal 297 659 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Tan10g1341 673 MobiDBLite consensus disorder prediction 1 15 - -
Tan10g1341 673 Gene3D Exocyst complex component Exo70 110 671 - -
Tan10g1341 673 MobiDBLite consensus disorder prediction 1 54 - -
Tan10g1341 673 FunFam Exocyst subunit Exo70 family protein 111 669 - -
Tan10g1341 673 MobiDBLite consensus disorder prediction 184 231 - -
Tan10g1341 673 MobiDBLite consensus disorder prediction 211 227 - -
Tan10g1341 673 SUPERFAMILY Cullin repeat-like 115 662 IPR016159 -
Tan10g1341 673 PANTHER EXOCYST COMPLEX PROTEIN EXO70 115 664 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2072 Tan-Chr4:74948413 Tan10g1341 Tan-Chr10:16134711 1.10E-09 dispersed
Tan10g1341 Tan-Chr10:16134711 Tan11g1421 Tan-Chr11:12798608 3.00E-167 dispersed
Tan10g1341 Tan-Chr10:16134711 Tan09g2370 Tan-Chr9:73415933 1.20E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1341 K07195 - csv:101220402 1187.56