Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1368 ATGGAGGTAGAAACAATGATGGAACAGAAAAGGAACCTATGCTCTGTTGATGAGAGTAGCCTCACTTCTCTTACATCCAAGCGACACAAGACTGATTTTTCTATCTCCTCCAAGGAGAGGAAAGACAAACTGGGTGAACGAATTATTGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAGGTAATGGAATATATTCAATTCCTTCACGAGCAAGTCAAGGTGTTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTCAGTTGCAGGAGCTGGAGGCATACGACCACAGCCTGAGGAACCGAGGTTTATGTCTCGTTCCAATCTCGTGGACCGCTGGAGTTGCACGCAGCAATGGTGCAGACATTTGGGCACCTGTGAAGACTACTTCCCCCAAATTCGAAAAAACCATCTCACCATTCAATTGA 453 45.92 MEVETMMEQKRNLCSVDESSLTSLTSKRHKTDFSISSKERKDKLGERIIALQQLVSPYGKTDTASVLLEVMEYIQFLHEQVKVLSAPYLQSTPTVQLQELEAYDHSLRNRGLCLVPISWTAGVARSNGADIWAPVKTTSPKFEKTISPFN 150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17052173 17056697 - Tan0018668.1 Tan10g1368 766162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1368 150 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 28 77 IPR011598 GO:0046983(InterPro)
Tan10g1368 150 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 30 120 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Tan10g1368 150 SMART finulus 36 83 IPR011598 GO:0046983(InterPro)
Tan10g1368 150 FunFam Transcription factor bHLH113 family 27 103 - -
Tan10g1368 150 CDD bHLH_AtbHLH_like 34 85 IPR045239 -
Tan10g1368 150 Gene3D - 25 109 IPR036638 GO:0046983(InterPro)
Tan10g1368 150 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 30 93 IPR036638 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1531 Tan-Chr6:22124963 Tan10g1368 Tan-Chr10:17052173 9.70E-22 dispersed
Tan09g1254 Tan-Chr9:64884174 Tan10g1368 Tan-Chr10:17052173 2.50E-13 dispersed
Tan09g1255 Tan-Chr9:64884174 Tan10g1368 Tan-Chr10:17052173 4.30E-22 dispersed
Tan10g1368 Tan-Chr10:17052173 Tan11g0753 Tan-Chr11:6378036 1.10E-11 dispersed
Tan10g1368 Tan-Chr10:17052173 Tan03g2382 Tan-Chr3:77601358 9.20E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1368 - - - 0.0