Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1454 ATGAAAACGGCCAAGAAATTGCATGAAATGGATCCTCTCCAAAAGCCAAAACAAGATCGTTACGCTCTTAGAACTTCTCCTCAGTGGTTGGGTCCCTTGATTGAAGTCATTCGATTCTCCACAAAGTCAATTGAACGAGAAATTAATTCACTCAATGATAACCCTTTGATTGATGTTTCAAGAAACAAAGCATTGCACGGAGGCAACTTCCAAGGAACACCCATTGGAGTTTCTATGGACAACACTCGTTTGGCCATTGCTTCAATTGGAAAGCTCATGTTTGCCCAATTTTCAGAACTTGTCAATGATTTCTACAATAACGGTTTGCCTTCTAATCTTTCTGCAAGTAGAAACCCCAGCTTAGATTATGGGTTCAAAGGTGCTGAGATTGCCATGGCTTCTTATTGCTCTGAGCTCCAATATCTTGCAAATCCAGTGACAACTCATGTTCAAAGTGCCGAGCAACACAACCAAGATGTTAACTCTCTTGGTTTAATTTCTTCAAGGAAAACAACTGAAGCCATCGACATTCTTAAACTCATGTCTTCCACATTTTTAACATTTGGAGGAAAACTTGAAGAATACAAAGAAAACACCATTAGCCAAGTGGCAAAAAAAGTGTTGACCACATCCTCTAATGGCCCACTTCACCCATCAAGATTTTGTGAGAAAGATCTACTTAAAGTTGTTGATAGAGAATACACCTTTGCATACATCGATGATCCATGCAGTGCTACTTACCCATTGATGCAAAAGTTGAGGCAAGTTCTCGTTGAGCATGCACTTAAAAATGGTGATAATGAAGTGAACACAAACACTTCAATCTTTCAAAAGATCGTTGCTTTTGAGGAGGAATTAGTGGCAGTCTTACCAAAAGACGTTGAAGACGTAAGGTTGGCATATGAGAATGGAAATTCTAAGATTGAAAATCAAATTAAGGATTGCAGGTCTTACCCATTATACAAATTTGTGAGAGAGGAGTTGGGAACAAGATTGCTCACCGGAGAAAAGGTGATATCTCCCGGAGAAGAATGCGAAAAGGTATTCACAGCTTTGTGTCAAGGAAAGATGATCGATTCTATCTTCGAGTGCTTGAAAGAGTGGAATGGAGCTCCAATCCCTATTTGCTAA 1131 39.52 MKTAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSLNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTTEAIDILKLMSSTFLTFGGKLEEYKENTISQVAKKVLTTSSNGPLHPSRFCEKDLLKVVDREYTFAYIDDPCSATYPLMQKLRQVLVEHALKNGDNEVNTNTSIFQKIVAFEEELVAVLPKDVEDVRLAYENGNSKIENQIKDCRSYPLYKFVREELGTRLLTGEKVISPGEECEKVFTALCQGKMIDSIFECLKEWNGAPIPIC 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19922572 19923905 + Tan0004071.1 Tan10g1454 766248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1454 376 NCBIfam phenylalanine ammonia-lyase 1 366 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Tan10g1454 376 MobiDBLite consensus disorder prediction 1 20 - -
Tan10g1454 376 FunFam Phenylalanine ammonia-lyase 190 310 - -
Tan10g1454 376 Gene3D Fumarase/aspartase (Central domain) 1 371 - -
Tan10g1454 376 Gene3D - 190 310 IPR023144 -
Tan10g1454 376 MobiDBLite consensus disorder prediction 1 18 - -
Tan10g1454 376 SUPERFAMILY L-aspartase-like 2 376 IPR008948 GO:0003824(InterPro)
Tan10g1454 376 PANTHER HISTIDINE AMMONIA-LYASE 1 376 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Tan10g1454 376 Pfam Aromatic amino acid lyase 14 187 IPR001106 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g1454 Tan-Chr10:19922572 Tan11g0873 Tan-Chr11:7147840 1.90E-166 dispersed
Tan10g1452 Tan-Chr10:19872823 Tan10g1454 Tan-Chr10:19922572 1.20E-206 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1454 K10775 - csv:101204574 690.263