Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1505 ATGGGGGCGATTTTGGCGATATCAGCTGTTCAAATGGTGCTATTTTTGGCTTTCTTCTACTTGGCCGCTCCCTATACTGACCCTCGCGATTTTGCAGTGCTTCAATCCTTGAATGATGGATGGCAAAATACACCACCAAGCTGGGGAACATCAAATGATCCCTGTCAAGCTCCCTGGGAAGGAGTGATTTGCAACAATTCAAGAGTAATTGCATTGAGATTATCAAGTATGGGCCTAAAAGGTAAACTTGGTGGAGACATTGGAGGCCTTACTGAACTGAGATCATTGGACCTTTCATCCAATCGAGATCTCACTGGTTCAATCTCTCCGGCACTAGGGGATTTGTTGAATTTGGATACCTTGATCCTTTCTGCGTGTGGATTTAGTGGTAATATTCCAGAAGGATTGGGCAATCTTGCTGAGCTAACCTTCTTGTCTTTATATTCTAACAATTTCACTGGTTCCATACCGCCAACTCTGGGAAAACTCTCCAAACTCTATTGGCTAGACCTAGCAGATAATCAGTTGACTGGTGTTCTGCCAGTTTCAACTTCCAAATCTCCGGGTTTGGATCTACTTTTTGAGGCTAAACACTTTCATTTCAGCAAAAACCAGTTATCAGGTACCATTTCACCTAAACTTTTTAGCTCCGAGATGATATTATTACACATATTCTTTGACCAAAATCAATTTTCTGGGAGTATCCCACCAACATTGGGACTTGTTAAGACCCTTGAGGCTCTTCGACTTGATCGGAATTCTTTAACTGGAAATGTCCCACCAGATCTAAACAACCTAATAAATGTTAATGAATTGAATTTAGCCAACAATATGCTAACAGGTCCACTGCCAAACTTAACTCAAATGAGTTCACTAAGTTACGTGGACCTTAGTAACAACTCATTTAGTTCATCAGCTGCTCCGGAATGGTTCTCAAATCTACAATCCCTCACCACTCTGATTGTTGAATATGGGTCAGTACGAGGATATCTGCCAGAAGGAATCTTTAGCTTACCACGCATACAACAAGTAAAACTGAAGAACAATGCATTTAGTGGGACATTAAATATGGGTGACAGCATCAGCCAACCGTTGCAGCTAGTTGATTTGCAAAATAACAATATTTCGTCAGTTACTTCTGTTTCGGGATATACTAGCAGTTTGATGCTGAGAGGAAATCCTGTATGTAAGGCTAGTGTCCACTCAATTACAAACTATTGCCAGCTTCAACAACAACAGACAAACCCCTATTCTACCAGCCTTAGCTGTGAAACTAAGTCATGTCCTCGTGATGAGAAGCTGAACCCTCAGAGTTGTGAATGTGCCTATCCATATGAAGGGACTTTATACTTTAGAGCACCTTCGTTCAGGGAATTGTCCAATATAACTCTCTTTCATGTACTGGAAGCCAGTCTTTTGGACAAATTCAACTTTACACCTTTTATTCGAGACCCCTTCTTTAATATTGATGATTACCTTCAGATGCAGCTTGCACTTTTTCCACCCAACGATAAGTATTTCAATAGGATAGACATTCAGAAGATTGGGTTCAGTTTCCACAATCAAATTTACAAACCTCCCCACAAGTTTGGGCCATATTATTTCATTGCATCTCCTTATCCTTTTTCAGCGATGAGTAGGGGAACTTCAACCAACACCGGAGTGGTAATTGGAATAGCTGTTGGCTGTGCCTTTCTCGTTCTATGCCTCATTGGAGTTGGAACATATGCAATTCAACAAAAGAGACGAGCAGAAAACGCCAAGCCAAATGCTTTCTGGGTGCCAAGTGGAAATGATAGTGGAGGTGCACCACAATTAAAGGGAGCCAGATGGTTTTCTTATGATGAACTTAAAAAATGCACAAATAATTTCTCCATGAGTAATGAGATAGGATCCGGAGGATTTGGCAAGGTATACAGAGGAACGCTGGTGGATGGAAAAGTAGTGGCAATCAAAAGAGCTCAACACGGATCAATGCAGGGTGCCCGTGAGTTCAAGACAGAAATTGAGCTGCTTTCACGAGTTCATCACAAGAATCTTCTTGGCTTAGTGGGATTTTGTTCTGAACAAGGAGAACAGATGCTTGTTTATGAATTCATGCCTAATGGGACACTTAGACAGAGCCTAGCTGGGAAATCTGGTATTCATCTTGATTGGAAGAGAAGACTTCGTATTGCACTTGGGTCTGCCAGAGGATTGACTTACCTGCATGAGCTTGCTAATCCTCCCATAATCCATAGAGATATTAAGTCCACCAACATTTTACTAGATGAACAATTAAACGCAAAGGTTGCAGATTTTGGCTTGTCCAAGCTCGTCTTAGACGGTGGAAAGGGACATGTTTCTACTCAAGTCAAAGGCACATTAGGTTATTTGGATCCTGAATATTACATGAGTCAACAATTGACTGAGAAAAGTGATGTATACAGCTTTGGAGTAGTTATGTTGGAACTACTAACTGCTAAGCTGCCAATTGAAAAAGGAAAGTACATAGTTCGTGAGTTGCGTATGTTGATGAATAAGAGCGATGAAGAATATTATGGTTTGAAACATATAATGGATGCAACCATAATCAATAATACCACAAATCTTATTGGGTTCGGAAGATTCTTAGAGTTGGCCATGCAATGCGTTGAAGAAACAGCTGCAGACCGTCCCACAATGAGTGAAGTGGTTAAGGCAATTGAGAACATTTTGCAAAATGATGGAATAAATACTAGCCCAACATCAGCATCCTCATCTGCCACAGACTTTGGGACTTCCAAAACTGCTCCTAGACATCCTTATAAATGA 2793 40.92 MGAILAISAVQMVLFLAFFYLAAPYTDPRDFAVLQSLNDGWQNTPPSWGTSNDPCQAPWEGVICNNSRVIALRLSSMGLKGKLGGDIGGLTELRSLDLSSNRDLTGSISPALGDLLNLDTLILSACGFSGNIPEGLGNLAELTFLSLYSNNFTGSIPPTLGKLSKLYWLDLADNQLTGVLPVSTSKSPGLDLLFEAKHFHFSKNQLSGTISPKLFSSEMILLHIFFDQNQFSGSIPPTLGLVKTLEALRLDRNSLTGNVPPDLNNLINVNELNLANNMLTGPLPNLTQMSSLSYVDLSNNSFSSSAAPEWFSNLQSLTTLIVEYGSVRGYLPEGIFSLPRIQQVKLKNNAFSGTLNMGDSISQPLQLVDLQNNNISSVTSVSGYTSSLMLRGNPVCKASVHSITNYCQLQQQQTNPYSTSLSCETKSCPRDEKLNPQSCECAYPYEGTLYFRAPSFRELSNITLFHVLEASLLDKFNFTPFIRDPFFNIDDYLQMQLALFPPNDKYFNRIDIQKIGFSFHNQIYKPPHKFGPYYFIASPYPFSAMSRGTSTNTGVVIGIAVGCAFLVLCLIGVGTYAIQQKRRAENAKPNAFWVPSGNDSGGAPQLKGARWFSYDELKKCTNNFSMSNEIGSGGFGKVYRGTLVDGKVVAIKRAQHGSMQGAREFKTEIELLSRVHHKNLLGLVGFCSEQGEQMLVYEFMPNGTLRQSLAGKSGIHLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDEQLNAKVADFGLSKLVLDGGKGHVSTQVKGTLGYLDPEYYMSQQLTEKSDVYSFGVVMLELLTAKLPIEKGKYIVRELRMLMNKSDEEYYGLKHIMDATIINNTTNLIGFGRFLELAMQCVEETAADRPTMSEVVKAIENILQNDGINTSPTSASSSATDFGTSKTAPRHPYK 930
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 23066185 23074747 - Tan0010165.2 Tan10g1505 766299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1505 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g1505 930 SUPERFAMILY L domain-like 286 410 - -
Tan10g1505 930 MobiDBLite consensus disorder prediction 903 930 - -
Tan10g1505 930 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 104 899 IPR050647 -
Tan10g1505 930 SUPERFAMILY L domain-like 44 303 - -
Tan10g1505 930 Gene3D Transferase(Phosphotransferase) domain 1 700 919 - -
Tan10g1505 930 ProSiteProfiles Protein kinase domain profile. 624 899 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1505 930 FunFam Leucine-rich repeat protein kinase family protein 595 699 - -
Tan10g1505 930 FunFam Predicted protein 188 410 - -
Tan10g1505 930 FunFam Leucine-rich repeat family protein 29 185 - -
Tan10g1505 930 SMART serkin_6 624 899 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1505 930 MobiDBLite consensus disorder prediction 903 921 - -
Tan10g1505 930 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 700 912 - -
Tan10g1505 930 ProSitePatterns Protein kinases ATP-binding region signature. 630 652 IPR017441 GO:0005524(InterPro)
Tan10g1505 930 Pfam Protein tyrosine and serine/threonine kinase 625 894 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g1505 930 CDD STKc_IRAK 630 898 - -
Tan10g1505 930 Gene3D Ribonuclease Inhibitor 31 188 IPR032675 -
Tan10g1505 930 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Tan10g1505 930 Pfam Leucine Rich Repeat 142 163 IPR001611 GO:0005515(InterPro)
Tan10g1505 930 Pfam Leucine Rich Repeat 245 266 IPR001611 GO:0005515(InterPro)
Tan10g1505 930 Pfam Leucine Rich Repeat 117 139 IPR001611 GO:0005515(InterPro)
Tan10g1505 930 Pfam Leucine Rich Repeat 291 314 IPR001611 GO:0005515(InterPro)
Tan10g1505 930 Gene3D Ribonuclease Inhibitor 189 435 IPR032675 -
Tan10g1505 930 SUPERFAMILY Protein kinase-like (PK-like) 609 909 IPR011009 -
Tan10g1505 930 Gene3D Phosphorylase Kinase; domain 1 598 699 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g1505 Tan-Chr10:23066185 Tan11g0375 Tan-Chr11:3035853 1.00E-72 dispersed
Tan10g1504 Tan-Chr10:23066185 Tan10g1505 Tan-Chr10:23066185 0.00E+00 tandem
Tan10g1505 Tan-Chr10:23066185 Tan10g1506 Tan-Chr10:23066185 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68152 PF07714 PK_Tyr_Ser-Thr 5.70E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1505 - - - 0.0