Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g1506 | ATGATATTATTACACATATTCTTTGACCAAAATCAATTTTCTGGGAGTATCCCACCAACATTGGGACTTGTTAAGACCCTTGAGGCTCTTCGACTTGATCGGAATTCTTTAACTGGAAATGTCCCACCAGATCTAAACAACCTAATAAATGTTAATGAATTGAATTTAGCCAACAATATGCTAACAGGTCCACTGCCAAACTTAACTCAAATGAGTTCACTAAGTTACGTGGACCTTAGTAACAACTCATTTAGTTCATCAGCTGCTCCGGAATGGTTCTCAAATCTACAATCCCTCACCACTCTGATTGTTGAATATGGGTCAGTACGAGGATATCTGCCAGAAGGAATCTTTAGCTTACCACGCATACAACAAGTAAAACTGAAGAACAATGCATTTAGTGGGACATTAAATATGGGTGACAGCATCAGCCAACCGTTGCAGCTAGTTGATTTGCAAAATAACAATATTTCGTCAGTTACTTCTGTTTCGGGATATACTAGCAGTTTGATGCTGAGAGGAAATCCTGTATGTAAGGCTAGTGTCCACTCAATTACAAACTATTGCCAGCTTCAACAACAACAGACAAACCCCTATTCTACCAGCCTTAGCTGTGAAACTAAGTCATGTCCTCGTGATGAGAAGCTGAACCCTCAGAGTTGTGAATGTGCCTATCCATATGAAGGGACTTTATACTTTAGAGCACCTTCGTTCAGGGAATTGTCCAATATAACTCTCTTTCATGTACTGGAAGCCAGTCTTTTGGACAAATTCAACTTTACACCTTTTATTCGAGACCCCTTCTTTAATATTGATGATTACCTTCAGATGCAGCTTGCACTTTTTCCACCCAACGATAAGTATTTCAATAGGATAGACATTCAGAAGATTGGGTTCAGTTTCCACAATCAAATTTACAAACCTCCCCACAAGTTTGGGCCATATTATTTCATTGCATCTCCTTATCCTTTTTCAGCGATGAGTAGGGGAACTTCAACCAACACCGGAGTGGTAATTGGAATAGCTGTTGGCTGTGCCTTTCTCGTTCTATGCCTCATTGGAGTTGGAACATATGCAATTCAACAAAAGAGACGAGCAGAAAACGCCAAGCCAAATGCTTTCTGGGTGCCAAGTGGAAATGATAGTGGAGGTGCACCACAATTAAAGGGAGCCAGATGGTTTTCTTATGATGAACTTAAAAAATGCACAAATAATTTCTCCATGAGTAATGAGATAGGATCCGGAGGATTTGGCAAGGTATACAGAGGAACGCTGGTGGATGGAAAAGTAGTGGCAATCAAAAGAGCTCAACACGGATCAATGCAGGGTGCCCGTGAGTTCAAGACAGAAATTGAGCTGCTTTCACGAGTTCATCACAAGAATCTTCTTGGCTTAGTGGGATTTTGTTCTGAACAAGGAGAACAGATGCTTGTTTATGAATTCATGCCTAATGGGACACTTAGACAGAGCCTAGCTGGGAAATCTGGTATTCATCTTGATTGGAAGAGAAGACTTCGTATTGCACTTGGGTCTGCCAGAGGATTGACTTACCTGCATGAGCTTGCTAATCCTCCCATAATCCATAGAGATATTAAGTCCACCAACATTTTACTAGATGAACAATTAAACGCAAAGGTTGCAGATTTTGGCTTGTCCAAGCTCGTCTTAGACGGTGGAAAGGGACATGTTTCTACTCAAGTCAAAGGCACATTAGGTTATTTGGATCCTGAATATTACATGAGTCAACAATTGACTGAGAAAAGTGATGTATACAGCTTTGGAGTAGTTATGTTGGAACTACTAACTGCTAAGCTGCCAATTGAAAAAGGAAAGTACATAGTTCGTGAGTTGCGTATGTTGATGAATAAGAGCGATGAAGAATATTATGGTTTGAAACATATAATGGATGCAACCATAATCAATAATACCACAAATCTTATTGGGTTCGGAAGATTCTTAGAGTTGGCCATGCAATGCGTTGAAGAAACAGCTGCAGACCGTCCCACAATGAGTGAAGTGGTTAAGGCAATTGAGAACATTTTGCAAAATGATGGAATAAATACTAGCCCAACATCAGCATCCTCATCTGCCACAGACTTTGGGACTTCCAAAACTGCTCCTAGACATCCTTATAAATGA | 2139 | 40.25 | MILLHIFFDQNQFSGSIPPTLGLVKTLEALRLDRNSLTGNVPPDLNNLINVNELNLANNMLTGPLPNLTQMSSLSYVDLSNNSFSSSAAPEWFSNLQSLTTLIVEYGSVRGYLPEGIFSLPRIQQVKLKNNAFSGTLNMGDSISQPLQLVDLQNNNISSVTSVSGYTSSLMLRGNPVCKASVHSITNYCQLQQQQTNPYSTSLSCETKSCPRDEKLNPQSCECAYPYEGTLYFRAPSFRELSNITLFHVLEASLLDKFNFTPFIRDPFFNIDDYLQMQLALFPPNDKYFNRIDIQKIGFSFHNQIYKPPHKFGPYYFIASPYPFSAMSRGTSTNTGVVIGIAVGCAFLVLCLIGVGTYAIQQKRRAENAKPNAFWVPSGNDSGGAPQLKGARWFSYDELKKCTNNFSMSNEIGSGGFGKVYRGTLVDGKVVAIKRAQHGSMQGAREFKTEIELLSRVHHKNLLGLVGFCSEQGEQMLVYEFMPNGTLRQSLAGKSGIHLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDEQLNAKVADFGLSKLVLDGGKGHVSTQVKGTLGYLDPEYYMSQQLTEKSDVYSFGVVMLELLTAKLPIEKGKYIVRELRMLMNKSDEEYYGLKHIMDATIINNTTNLIGFGRFLELAMQCVEETAADRPTMSEVVKAIENILQNDGINTSPTSASSSATDFGTSKTAPRHPYK | 712 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 23066185 | 23074747 | - | Tan0010165.3 | Tan10g1506 | 766300 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g1506 | 712 | SUPERFAMILY | L domain-like | 5 | 191 | - | - | |
Tan10g1506 | 712 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 526 | 538 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan10g1506 | 712 | Gene3D | Transferase(Phosphotransferase) domain 1 | 482 | 702 | - | - | |
Tan10g1506 | 712 | ProSitePatterns | Protein kinases ATP-binding region signature. | 412 | 434 | IPR017441 | GO:0005524(InterPro) | |
Tan10g1506 | 712 | ProSiteProfiles | Protein kinase domain profile. | 406 | 681 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g1506 | 712 | Pfam | Protein tyrosine and serine/threonine kinase | 407 | 676 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan10g1506 | 712 | Pfam | Leucine Rich Repeat | 27 | 48 | IPR001611 | GO:0005515(InterPro) | |
Tan10g1506 | 712 | Pfam | Leucine Rich Repeat | 73 | 96 | IPR001611 | GO:0005515(InterPro) | |
Tan10g1506 | 712 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 482 | 694 | - | - | |
Tan10g1506 | 712 | MobiDBLite | consensus disorder prediction | 685 | 712 | - | - | |
Tan10g1506 | 712 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 3 | 678 | - | - | |
Tan10g1506 | 712 | FunFam | Leucine-rich repeat protein kinase family protein | 377 | 481 | - | - | |
Tan10g1506 | 712 | Gene3D | Ribonuclease Inhibitor | 68 | 218 | IPR032675 | - | |
Tan10g1506 | 712 | MobiDBLite | consensus disorder prediction | 685 | 703 | - | - | |
Tan10g1506 | 712 | SMART | serkin_6 | 406 | 681 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g1506 | 712 | Gene3D | Phosphorylase Kinase; domain 1 | 380 | 481 | - | - | |
Tan10g1506 | 712 | SUPERFAMILY | Protein kinase-like (PK-like) | 391 | 691 | IPR011009 | - | |
Tan10g1506 | 712 | CDD | STKc_IRAK | 412 | 680 | - | - | |
Tan10g1506 | 712 | Gene3D | Ribonuclease Inhibitor | 3 | 67 | IPR032675 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan10g1504 | Tan-Chr10:23066185 | Tan10g1506 | Tan-Chr10:23066185 | 0.00E+00 | dispersed | |
Tan10g1506 | Tan-Chr10:23066185 | Tan11g0375 | Tan-Chr11:3035853 | 7.80E-73 | dispersed | |
Tan10g1505 | Tan-Chr10:23066185 | Tan10g1506 | Tan-Chr10:23066185 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68153 | PF07714 | PK_Tyr_Ser-Thr | 3.30E-48 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g1506 | - | - | - | 0.0 |