Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1506 ATGATATTATTACACATATTCTTTGACCAAAATCAATTTTCTGGGAGTATCCCACCAACATTGGGACTTGTTAAGACCCTTGAGGCTCTTCGACTTGATCGGAATTCTTTAACTGGAAATGTCCCACCAGATCTAAACAACCTAATAAATGTTAATGAATTGAATTTAGCCAACAATATGCTAACAGGTCCACTGCCAAACTTAACTCAAATGAGTTCACTAAGTTACGTGGACCTTAGTAACAACTCATTTAGTTCATCAGCTGCTCCGGAATGGTTCTCAAATCTACAATCCCTCACCACTCTGATTGTTGAATATGGGTCAGTACGAGGATATCTGCCAGAAGGAATCTTTAGCTTACCACGCATACAACAAGTAAAACTGAAGAACAATGCATTTAGTGGGACATTAAATATGGGTGACAGCATCAGCCAACCGTTGCAGCTAGTTGATTTGCAAAATAACAATATTTCGTCAGTTACTTCTGTTTCGGGATATACTAGCAGTTTGATGCTGAGAGGAAATCCTGTATGTAAGGCTAGTGTCCACTCAATTACAAACTATTGCCAGCTTCAACAACAACAGACAAACCCCTATTCTACCAGCCTTAGCTGTGAAACTAAGTCATGTCCTCGTGATGAGAAGCTGAACCCTCAGAGTTGTGAATGTGCCTATCCATATGAAGGGACTTTATACTTTAGAGCACCTTCGTTCAGGGAATTGTCCAATATAACTCTCTTTCATGTACTGGAAGCCAGTCTTTTGGACAAATTCAACTTTACACCTTTTATTCGAGACCCCTTCTTTAATATTGATGATTACCTTCAGATGCAGCTTGCACTTTTTCCACCCAACGATAAGTATTTCAATAGGATAGACATTCAGAAGATTGGGTTCAGTTTCCACAATCAAATTTACAAACCTCCCCACAAGTTTGGGCCATATTATTTCATTGCATCTCCTTATCCTTTTTCAGCGATGAGTAGGGGAACTTCAACCAACACCGGAGTGGTAATTGGAATAGCTGTTGGCTGTGCCTTTCTCGTTCTATGCCTCATTGGAGTTGGAACATATGCAATTCAACAAAAGAGACGAGCAGAAAACGCCAAGCCAAATGCTTTCTGGGTGCCAAGTGGAAATGATAGTGGAGGTGCACCACAATTAAAGGGAGCCAGATGGTTTTCTTATGATGAACTTAAAAAATGCACAAATAATTTCTCCATGAGTAATGAGATAGGATCCGGAGGATTTGGCAAGGTATACAGAGGAACGCTGGTGGATGGAAAAGTAGTGGCAATCAAAAGAGCTCAACACGGATCAATGCAGGGTGCCCGTGAGTTCAAGACAGAAATTGAGCTGCTTTCACGAGTTCATCACAAGAATCTTCTTGGCTTAGTGGGATTTTGTTCTGAACAAGGAGAACAGATGCTTGTTTATGAATTCATGCCTAATGGGACACTTAGACAGAGCCTAGCTGGGAAATCTGGTATTCATCTTGATTGGAAGAGAAGACTTCGTATTGCACTTGGGTCTGCCAGAGGATTGACTTACCTGCATGAGCTTGCTAATCCTCCCATAATCCATAGAGATATTAAGTCCACCAACATTTTACTAGATGAACAATTAAACGCAAAGGTTGCAGATTTTGGCTTGTCCAAGCTCGTCTTAGACGGTGGAAAGGGACATGTTTCTACTCAAGTCAAAGGCACATTAGGTTATTTGGATCCTGAATATTACATGAGTCAACAATTGACTGAGAAAAGTGATGTATACAGCTTTGGAGTAGTTATGTTGGAACTACTAACTGCTAAGCTGCCAATTGAAAAAGGAAAGTACATAGTTCGTGAGTTGCGTATGTTGATGAATAAGAGCGATGAAGAATATTATGGTTTGAAACATATAATGGATGCAACCATAATCAATAATACCACAAATCTTATTGGGTTCGGAAGATTCTTAGAGTTGGCCATGCAATGCGTTGAAGAAACAGCTGCAGACCGTCCCACAATGAGTGAAGTGGTTAAGGCAATTGAGAACATTTTGCAAAATGATGGAATAAATACTAGCCCAACATCAGCATCCTCATCTGCCACAGACTTTGGGACTTCCAAAACTGCTCCTAGACATCCTTATAAATGA 2139 40.25 MILLHIFFDQNQFSGSIPPTLGLVKTLEALRLDRNSLTGNVPPDLNNLINVNELNLANNMLTGPLPNLTQMSSLSYVDLSNNSFSSSAAPEWFSNLQSLTTLIVEYGSVRGYLPEGIFSLPRIQQVKLKNNAFSGTLNMGDSISQPLQLVDLQNNNISSVTSVSGYTSSLMLRGNPVCKASVHSITNYCQLQQQQTNPYSTSLSCETKSCPRDEKLNPQSCECAYPYEGTLYFRAPSFRELSNITLFHVLEASLLDKFNFTPFIRDPFFNIDDYLQMQLALFPPNDKYFNRIDIQKIGFSFHNQIYKPPHKFGPYYFIASPYPFSAMSRGTSTNTGVVIGIAVGCAFLVLCLIGVGTYAIQQKRRAENAKPNAFWVPSGNDSGGAPQLKGARWFSYDELKKCTNNFSMSNEIGSGGFGKVYRGTLVDGKVVAIKRAQHGSMQGAREFKTEIELLSRVHHKNLLGLVGFCSEQGEQMLVYEFMPNGTLRQSLAGKSGIHLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDEQLNAKVADFGLSKLVLDGGKGHVSTQVKGTLGYLDPEYYMSQQLTEKSDVYSFGVVMLELLTAKLPIEKGKYIVRELRMLMNKSDEEYYGLKHIMDATIINNTTNLIGFGRFLELAMQCVEETAADRPTMSEVVKAIENILQNDGINTSPTSASSSATDFGTSKTAPRHPYK 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 23066185 23074747 - Tan0010165.3 Tan10g1506 766300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1506 712 SUPERFAMILY L domain-like 5 191 - -
Tan10g1506 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g1506 712 Gene3D Transferase(Phosphotransferase) domain 1 482 702 - -
Tan10g1506 712 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524(InterPro)
Tan10g1506 712 ProSiteProfiles Protein kinase domain profile. 406 681 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1506 712 Pfam Protein tyrosine and serine/threonine kinase 407 676 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g1506 712 Pfam Leucine Rich Repeat 27 48 IPR001611 GO:0005515(InterPro)
Tan10g1506 712 Pfam Leucine Rich Repeat 73 96 IPR001611 GO:0005515(InterPro)
Tan10g1506 712 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 482 694 - -
Tan10g1506 712 MobiDBLite consensus disorder prediction 685 712 - -
Tan10g1506 712 PANTHER RECEPTOR-LIKE PROTEIN 55 3 678 - -
Tan10g1506 712 FunFam Leucine-rich repeat protein kinase family protein 377 481 - -
Tan10g1506 712 Gene3D Ribonuclease Inhibitor 68 218 IPR032675 -
Tan10g1506 712 MobiDBLite consensus disorder prediction 685 703 - -
Tan10g1506 712 SMART serkin_6 406 681 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1506 712 Gene3D Phosphorylase Kinase; domain 1 380 481 - -
Tan10g1506 712 SUPERFAMILY Protein kinase-like (PK-like) 391 691 IPR011009 -
Tan10g1506 712 CDD STKc_IRAK 412 680 - -
Tan10g1506 712 Gene3D Ribonuclease Inhibitor 3 67 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g1504 Tan-Chr10:23066185 Tan10g1506 Tan-Chr10:23066185 0.00E+00 dispersed
Tan10g1506 Tan-Chr10:23066185 Tan11g0375 Tan-Chr11:3035853 7.80E-73 dispersed
Tan10g1505 Tan-Chr10:23066185 Tan10g1506 Tan-Chr10:23066185 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68153 PF07714 PK_Tyr_Ser-Thr 3.30E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1506 - - - 0.0