Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1521 ATGTACCACCATCATCAACATAGAGGGAAGAGCAATATCCATTCGTCTGAGAGGCATTTGTTTTTGCAAGGTGGAAATGGGCCTGGAGATTCTGGCCTTGTTCTTTCTACTGATGCTAAGCCTAGGCTTAAATGGACTCCTGATTTGCATGATCGTTTTGTTGAAGCTGTCAATCAGCTTGGGGGAGCTGACAAGGCTACTCCTAAAACTGTGATGAAAATCATGGGCATTCCTGGACTTACCTTGTACCACTTGAAAAGCCATCTTCAGAAATACAGGCTGAGTAAGAATCTGCATGGACAAGCAAATGGTGGGGCTGGAACAAACAAAACTGGGACAGTGGCGGTTTCGGGAGATCAGAGATTGGGGGAGGCAAATGGAGCAGCTCGCACTAACAACATAGTCGTCAGCCCACAGTCCTCCTCTCAGGCCAATAAAAGCCTTCAGATCAGTGAAACAATACAGATGCAGATTGAAGTGCAGAAAAGGCTACACGAACAACTCGAGGTACAACGGCACTTGCAGCTGCGAATAGAAGCACAAGGGAAGTATCTACAAACGGTGTTGGAGAAAGCACAAGAAACACTTGGAAGGCAAAACTTAGGCACAGTGGGACTTGAAGCCGCAAAAGTACAGCTTTCAGAATTGGTCTCAAAAGTCTCCACTCAATGCCTAACCGCAGCATTTCCAGAGCTCCACCATCAGCAGCAGCAGCAACAACAACAAACTCAAAGGCTATGCCCTCCACAAAGCCAGCCCCCTGACTGTTCAATGGACAGTTGCTTGACCTCCTGCGAGGGCTCCAAGGACCAACATGACCAACAAGTCCTCCTCCACAACAGCCACCTGGCCCTCCGACCCTATGCCATCCCCACCGACCGAGCCTCCTCGGCCCCGGACCACCATCATGGGCTGTCCATGAGCATTGGACTGGTGCAGGGGGACAAACCCGGCGAAGGGTATTATAATGGGTACTCGCCATCCGAGGGCCAGAGATTTGGGAGTAAAAGAAAGGAGGCGGAGACGGAGAAGGTGGTTGACGCCGCGTTTAGATATAGAATCGCGGCGTCTTCGTTGGACTTGAATGCTGGTGAGGATCAACTTAGTAATAATGATCATCCGCCTTCTGCTAATTGCAAGATGTTTGATCTTAATGGCTTTAGCTGA 1167 49.53 MYHHHQHRGKSNIHSSERHLFLQGGNGPGDSGLVLSTDAKPRLKWTPDLHDRFVEAVNQLGGADKATPKTVMKIMGIPGLTLYHLKSHLQKYRLSKNLHGQANGGAGTNKTGTVAVSGDQRLGEANGAARTNNIVVSPQSSSQANKSLQISETIQMQIEVQKRLHEQLEVQRHLQLRIEAQGKYLQTVLEKAQETLGRQNLGTVGLEAAKVQLSELVSKVSTQCLTAAFPELHHQQQQQQQQTQRLCPPQSQPPDCSMDSCLTSCEGSKDQHDQQVLLHNSHLALRPYAIPTDRASSAPDHHHGLSMSIGLVQGDKPGEGYYNGYSPSEGQRFGSKRKEAETEKVVDAAFRYRIAASSLDLNAGEDQLSNNDHPPSANCKMFDLNGFS 388
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 23426252 23429080 + Tan0007722.2 Tan10g1521 766315
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1521 388 Pfam MYB-CC type transfactor, LHEQLE motif 148 195 IPR025756 -
Tan10g1521 388 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Tan10g1521 388 FunFam Myb family transcription factor 39 97 - -
Tan10g1521 388 NCBIfam myb-like DNA-binding domain, SHAQKYF class 40 95 IPR006447 GO:0003677(InterPro)
Tan10g1521 388 MobiDBLite consensus disorder prediction 1 29 - -
Tan10g1521 388 Pfam Myb-like DNA-binding domain 42 93 IPR001005 -
Tan10g1521 388 Gene3D - 39 97 - -
Tan10g1521 388 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 97 IPR017930 -
Tan10g1521 388 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 275 IPR046955 GO:0003700(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1465 Tan-Chr2:58553866 Tan10g1521 Tan-Chr10:23426252 5.40E-36 dispersed
Tan10g0520 Tan-Chr10:4152978 Tan10g1521 Tan-Chr10:23426252 1.50E-36 dispersed
Tan10g1521 Tan-Chr10:23426252 Tan11g1867 Tan-Chr11:24114385 6.10E-11 dispersed
Tan10g1520 Tan-Chr10:23426252 Tan10g1521 Tan-Chr10:23426252 2.90E-202 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28591 PF00249 Myb_DNA-binding 5.60E-08 CL0123 Tan TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1521 - - - 0.0