Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1559 ATGGAGTTGGTAGCCGAGAAGAAGGATTTTGATTCTGCAAACGACAACAACAAGCTTAACTCTTCTCAAGCAGTTCTTGATTCTTCCTATCTACCCTCACTCGCTGCTGATGACACTGGTAGTAATAACAATTCCAAAGAAGCTGAAGATTTAAACGAACACGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGAACTCAAACATCATATGAGGACAACATAAAAAAGATCGTGGACTTTAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCCCGTCCTTCTTCATTGCCAAGCCCAACGGATCTGCATCTCTTCAAGGAAGGAATCCGCCCTCTTTGGGAGGATTCTGCTAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGTCGATTTTGGGAAGATTTGGTTCTCGCATTAGTGGGCGACCAGCTTGATTTCGGTGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGTGTCTGGAACCGCAATGCATCTGATCATCAGGCAGTGATGGGTCTGCGAGATTCGATCAAACGACACTTAAAGCTTCCACATGGGTACGTAATGGAATACAAACCCCACGACGCCTCTCTGCGTGATAACTCGTCATATAGAAACACATGGTTGCGAGGGTAA 732 44.67 MELVAEKKDFDSANDNNKLNSSQAVLDSSYLPSLAADDTGSNNNSKEAEDLNEHVARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24572885 24587629 + Tan0019953.1 Tan10g1559 766353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1559 243 Gene3D RNA Cap, Translation Initiation Factor Eif4e 35 236 IPR023398 -
Tan10g1559 243 Pfam Eukaryotic initiation factor 4E 65 223 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Tan10g1559 243 SUPERFAMILY eIF4e-like 41 239 IPR023398 -
Tan10g1559 243 ProSitePatterns Eukaryotic initiation factor 4E signature. 121 144 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Tan10g1559 243 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 41 231 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Tan10g1559 243 FunFam Eukaryotic translation initiation factor NCBP 36 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2373 Tan-Chr6:75802675 Tan10g1559 Tan-Chr10:24572885 7.70E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1559 K03259 - csv:101204290 459.529