Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan10g1637 | ATGTCATTGGAACGGTATCTGAAGGACTTCGAAGTTAAGTCCAAACATTCTTCAGAGGAGGCCTTGAGGAGGTGGAGATCTGCCGTCTCTATCGTCAGAAATCGACGCCGGAGGTTCCGAAATGTTGCAGATCTCGACAAACGCTCCGAGGCCGAGAAGAAGAAGCTCAAAATCCAGGAAAAAATTCGAGTTGCGCTTTACGTCCAGAAGGCAGCATTACAGTTTATGGATGCTGTTAATAGGGAAGAGTACCATCTGTCAGATGAGGCTAGGAATGCTGGCTATAATATTCATCCAGATGAGCTGGCAGCCATAGTTCGTAGCCATGATCATAAGGCATTAAAATTCCATGGTGGTGTCGAAGGACTTTCAAGGAAAGTTTCTGTCGCACTAGATGCAGGTGTTAGTGAAAAGGATAAGTCCAAGAGACAAGAGATTTATGGTTTTAATCGTTACACAGAGAAACCTTCCAGATCCTTTTTGGTGTTTGTATGGGAAGCATTACATGACTTGACATTAATCATCCTAATATTTTGTGCACTAATTTCTTTGGGAGTTGGCATTGCCACTGAAGGATGGCCGAAGGGTACATATGATGGTTTAGGAATTCTACTCAGTATAGTATTGGTGGTCTTGGTTACTTCTATTAGTGATTACAAGCAGTCTTTGCAATTCAGAGATCTTGATCGGGAGAAAAAAAAAATTTATGTTGATGTCACTAGGGATGGGCTGAGAACAAAAGTTTCGATTTATGACTTGGTTGTTGGAGATATTGTTCATCTATCCATTGGAGATCAGGTTCCTGCTGATGGGGTTTTCATATCAGGATACAGTCTCCTAATTGATGAATCCAGCTTATCAGGTGAAAGTGAACCAATGAACATAGATGAAGAGAAACCATTTCTTCTTTCAGGAACCAAAGTGCAAGATGGATCTGGAAAGATGATGGTAACAACAGTTGGCATGAAAACTGAATGGGGAAAATTGATGGAAACTCTTAGCGAGGGAGGAGAGGATGAGACTCCATTGCAGGTGAAGCTGAATGGTGTAGCAACTCTTATTGGTAAAATTGGTTTGACTTTTGCTGTATTGACATTCCTGGTGATGACAGGAAGGTTTCTCTTGGAAAAAGCTCATCACCATCAATTTACGAAGTGGACTTCAAGTGATGCACTAAAACTCCTAGATTTCTTTGCCATTGCAGTTACCATAATTGTCGTGGCAGTTCCTGAAGGTTTACCACTGGCAGTGACATTGAGCCTTGCCTTTGCTATGAAGAAATTGATGGATGAAAGAGCACTAGTTAGGCATCTGTCTGCATGTGAAACGATGGGTTCAGCTACTTGCATTTGCACGGATAAGACAGGGACGTTAACCACAAACCATATGATAGTTAGTCGTGCATGGGTTTGTGAAAAATTTATGGAGAATAAAGACCATGAGAGTGTAAACAAATTCAAATCAGAGATCTCTCAAGACGTTTTAGGCATATTTTTGCAGTGCATATTTCAAAATACTAGCTGCGAAGTGACTAAAGATAAAAACGGGCATAACTCAATCGTTGGTGGATCACCAACGGAATCAGCAATATTAGAGTTTGGCATGCAGTTGGGTGGGGATTATCATGCCCAACGTATAGAATATAAAATACTTAAGGTTGAGCCTTTCAATTCTGTTAGGAAGAAGATGTCTGTACTTGTAGCTCTTCCTAATGGTGGGGTCAGAGCTTTTATCAAAGGTGCATCTGAAATAATACTAAGTATGTGCGACAAGTTTATTGATTCCAATGGAGAATGTATTGACTTAACAGAAGAGAAGGTAAAGAAAGCAACAAATGTTATCAATAATTTTGCCAATGAAGCTTTGAGGACGCTTTGCTTGGCCTTCAAAGATATAGAGGACTCCGGTGACAAATCTATTCCAGATGATGGATATACATTAATTGCAGTTGTTGGAATCAAGGATCCTGTACGCCCAGGGGTCAAGGAAGCTGTTAAAACTTGTTTAGCAGCTGGAATAACTGTGCGTATGGTCACTGGGGATAATATTAATACAGCAAAGGCTATTGCTAAAGAATGTGGTATACTTACAGATGATGGTTTAGCTATAGAAGGACCATACTTCCGCAATTTATCTCCAGAGCAGATGAATCAAGTTATACCAAAACTTCAGGTCATGGCTCGGTCCTTGCCGCTGGACAAATACACATTAGTTAACAATTTGCGGAGTACTGGCGAGGTCGTTGCAGTGACCGGAGATGGGACAAATGATGCTCCAGCTTTGCATGAGTCAGATATTGGACTAGCTATGGGCATTGCCGGGACTGAGGTGGCCAAAGAAAATGCCGATGTCATCATAATGGATGACAATTTTTCAACCATTGTAAATGTTGCTCGATGGGGACGTGCTGTGTATATTAACATACAAAAGTTTGTGCAGTTTCAACTAACAGTTAACATTGTTGCTCTAGTGATCAATTTCGTTTCTGCTTGTCTCTCAGGATCTGCTCCTCTTACGGCTGTTCAGTTGCTTTGGGTCAACTTGATTATGGACACTCTTGGTGCTTTGGCACTGGCCACAGAGCCTCCAAATGATGGACTTATGCAGAGACCCCCAATCCCCAAGGGGGTTAGCTTTATTACCAAAGCCATGTGGAGGAATATTATTGGTCAGAGTATCTATCAACTTGCTGTTCTTGCAGTTCTTAATTTTGGAGGAAAGCAACTTCTTGGACTTACTGGATCTGATTCCACAAAAGTTCTCAACACTTTGATATTTAACTCATTTGTGTTCTGCCAGGTTTTCAACGAAATTAACAGCCGTGAGATAGAAAAGATCAACATTTTCAGAGGGATGTTTAGCAGCTGGATATTTTTGGGAGTAATGGTAGCCACAGTGGCGTTTCAAATAATAATTGTTGAACTTTTGGGTGCTTTTGCAAGCACTGTACCACTGAGCTGGGAACTGTGGGGACTGAGCGTGTTGATTGGGTTTGTGAGTATGCCTGTTGCAGTTGTGTTGAAGTTCATCCCTCTTCCTAAAGAAGAACCATACACAGTTCATCATGATGGCTACGATCTTCTCCATTCTGGCCCAGAGCTGGCTTGA | 3108 | 41.44 | MSLERYLKDFEVKSKHSSEEALRRWRSAVSIVRNRRRRFRNVADLDKRSEAEKKKLKIQEKIRVALYVQKAALQFMDAVNREEYHLSDEARNAGYNIHPDELAAIVRSHDHKALKFHGGVEGLSRKVSVALDAGVSEKDKSKRQEIYGFNRYTEKPSRSFLVFVWEALHDLTLIILIFCALISLGVGIATEGWPKGTYDGLGILLSIVLVVLVTSISDYKQSLQFRDLDREKKKIYVDVTRDGLRTKVSIYDLVVGDIVHLSIGDQVPADGVFISGYSLLIDESSLSGESEPMNIDEEKPFLLSGTKVQDGSGKMMVTTVGMKTEWGKLMETLSEGGEDETPLQVKLNGVATLIGKIGLTFAVLTFLVMTGRFLLEKAHHHQFTKWTSSDALKLLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMDERALVRHLSACETMGSATCICTDKTGTLTTNHMIVSRAWVCEKFMENKDHESVNKFKSEISQDVLGIFLQCIFQNTSCEVTKDKNGHNSIVGGSPTESAILEFGMQLGGDYHAQRIEYKILKVEPFNSVRKKMSVLVALPNGGVRAFIKGASEIILSMCDKFIDSNGECIDLTEEKVKKATNVINNFANEALRTLCLAFKDIEDSGDKSIPDDGYTLIAVVGIKDPVRPGVKEAVKTCLAAGITVRMVTGDNINTAKAIAKECGILTDDGLAIEGPYFRNLSPEQMNQVIPKLQVMARSLPLDKYTLVNNLRSTGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACLSGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMQRPPIPKGVSFITKAMWRNIIGQSIYQLAVLAVLNFGGKQLLGLTGSDSTKVLNTLIFNSFVFCQVFNEINSREIEKINIFRGMFSSWIFLGVMVATVAFQIIIVELLGAFASTVPLSWELWGLSVLIGFVSMPVAVVLKFIPLPKEEPYTVHHDGYDLLHSGPELA | 1035 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 31065507 | 31080862 | - | Tan0007167.1 | Tan10g1637 | 766431 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan10g1637 | 1035 | FunFam | Calcium-transporting ATPase | 768 | 1014 | - | - | |
| Tan10g1637 | 1035 | SUPERFAMILY | HAD-like | 450 | 856 | IPR036412 | - | |
| Tan10g1637 | 1035 | NCBIfam | HAD-IC family P-type ATPase | 720 | 839 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan10g1637 | 1035 | NCBIfam | HAD-IC family P-type ATPase | 203 | 490 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan10g1637 | 1035 | NCBIfam | HAD-IC family P-type ATPase | 549 | 697 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan10g1637 | 1035 | CDD | P-type_ATPase_Ca_PMCA-like | 141 | 884 | - | - | |
| Tan10g1637 | 1035 | SFLD | p-type atpase | 433 | 803 | IPR044492 | - | |
| Tan10g1637 | 1035 | SMART | Cation_ATPase_N_a_2 | 93 | 188 | IPR004014 | - | |
| Tan10g1637 | 1035 | Pfam | Cation transporting ATPase, C-terminus | 836 | 1010 | IPR006068 | - | |
| Tan10g1637 | 1035 | Pfam | Cation transport ATPase (P-type) | 507 | 591 | - | - | |
| Tan10g1637 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 451 | 465 | - | - | |
| Tan10g1637 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 649 | 660 | - | - | |
| Tan10g1637 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 775 | 787 | - | - | |
| Tan10g1637 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 671 | 681 | - | - | |
| Tan10g1637 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 282 | 296 | - | - | |
| Tan10g1637 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 751 | 770 | - | - | |
| Tan10g1637 | 1035 | Pfam | Cation transporter/ATPase, N-terminus | 117 | 183 | IPR004014 | - | |
| Tan10g1637 | 1035 | Pfam | E1-E2 ATPase | 234 | 429 | - | - | |
| Tan10g1637 | 1035 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 8 | 50 | IPR024750 | GO:0005516(InterPro) | |
| Tan10g1637 | 1035 | Pfam | haloacid dehalogenase-like hydrolase | 643 | 763 | - | - | |
| Tan10g1637 | 1035 | SFLD | Haloacid Dehalogenase | 433 | 803 | - | - | |
| Tan10g1637 | 1035 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 457 | 661 | IPR023299 | GO:0000166(InterPro) | |
| Tan10g1637 | 1035 | FunFam | Calcium-transporting ATPase | 461 | 656 | - | - | |
| Tan10g1637 | 1035 | Gene3D | - | 17 | 78 | - | - | |
| Tan10g1637 | 1035 | SUPERFAMILY | Calcium ATPase, transduction domain A | 236 | 332 | IPR008250 | - | |
| Tan10g1637 | 1035 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 117 | 1011 | IPR023298 | - | |
| Tan10g1637 | 1035 | Gene3D | - | 134 | 334 | - | - | |
| Tan10g1637 | 1035 | PANTHER | CATION TRANSPORTING ATPASE | 77 | 1012 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Tan10g1637 | 1035 | FunFam | Calcium-transporting ATPase | 213 | 334 | - | - | |
| Tan10g1637 | 1035 | Coils | Coil | 600 | 620 | - | - | |
| Tan10g1637 | 1035 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 106 | 1011 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Tan10g1637 | 1035 | Gene3D | - | 166 | 1010 | - | - | |
| Tan10g1637 | 1035 | Gene3D | - | 448 | 796 | IPR023214 | - | |
| Tan10g1637 | 1035 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 453 | 459 | IPR018303 | - | |
| Tan10g1637 | 1035 | PRINTS | H+-transporting ATPase (proton pump) signature | 610 | 628 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan10g1637 | 1035 | PRINTS | H+-transporting ATPase (proton pump) signature | 751 | 767 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan10g1637 | 1035 | PRINTS | H+-transporting ATPase (proton pump) signature | 783 | 808 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan10g1637 | 1035 | Gene3D | - | 461 | 656 | IPR023299 | GO:0000166(InterPro) | |
| Tan10g1637 | 1035 | FunFam | Calcium-transporting ATPase | 648 | 796 | - | - | |
| Tan10g1637 | 1035 | FunFam | Calcium-transporting ATPase | 17 | 77 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan03g1674 | Tan-Chr3:72773843 | Tan10g1637 | Tan-Chr10:31065507 | 8.60E-297 | dispersed | |
| Tan03g1675 | Tan-Chr3:72773843 | Tan10g1637 | Tan-Chr10:31065507 | 2.10E-268 | dispersed | |
| Tan08g0905 | Tan-Chr8:12498995 | Tan10g1637 | Tan-Chr10:31065507 | 2.30E-262 | dispersed | |
| Tan09g1717 | Tan-Chr9:68720537 | Tan10g1637 | Tan-Chr10:31065507 | 8.30E-20 | dispersed | |
| Tan09g1718 | Tan-Chr9:68720537 | Tan10g1637 | Tan-Chr10:31065507 | 8.30E-20 | dispersed | |
| Tan10g1637 | Tan-Chr10:31065507 | Tan11g1481 | Tan-Chr11:13525081 | 0.00E+00 | dispersed | |
| Tan10g1637 | Tan-Chr10:31065507 | Tan01g4694 | Tan-Chr1:112877771 | 0.00E+00 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan10g1637 | K01537 | - | csv:101206199 | 1788.85 |